prot_L-elsbetiae_contig14839.3498.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14839.3498.1
Unique Nameprot_L-elsbetiae_contig14839.3498.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length116
Homology
BLAST of mRNA_L-elsbetiae_contig14839.3498.1 vs. uniprot
Match: A0A6H5JW94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW94_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.670e-6
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    6 EKKCAYHRGCAKQPSFGVAGSKKAEFCCEHKKVGMVNV 43
            +K+C  H GC K+PSFG AGSK+AEFCC H K  MV V
Sbjct:    6 DKRCG-HPGCTKKPSFGTAGSKRAEFCCPHAKQDMVIV 42          
BLAST of mRNA_L-elsbetiae_contig14839.3498.1 vs. uniprot
Match: D7FY22_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY22_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 4.440e-6
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    5 KEKKCAYHRGCAKQPSFGVAGSKKAEFCCEHKKVGMVNVKKYKRC 49
            K ++C    GC  +PS+G+ GSKKAEFC +H K GM NV K KRC
Sbjct:   26 KGQRCCQEHGCTARPSYGIDGSKKAEFCSKHSKPGMTNVTK-KRC 69          
BLAST of mRNA_L-elsbetiae_contig14839.3498.1 vs. uniprot
Match: D7FIE1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE1_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 5.160e-5
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    9 CAYHRGCAKQPSFGVAGSKKAEFCCEHKKVGMVNVKKYKRCN 50
            C    GC K PS+G AGSKK EFC +H K GMVN++  +RC+
Sbjct:  108 CCKEHGCTKWPSYGGAGSKKVEFCAQHAKKGMVNLRS-RRCD 148          
BLAST of mRNA_L-elsbetiae_contig14839.3498.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 6.290e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0
Query:   12 HRGCAKQPSFGVAGSKKAEFCCEHKKVGMVNV 43
            H GC KQP +GVAG+KK EFC  H+K GMV+V
Sbjct:    6 HAGCPKQPKYGVAGTKKREFCSGHRKAGMVDV 37          
BLAST of mRNA_L-elsbetiae_contig14839.3498.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 8.610e-5
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0
Query:   12 HRGCAKQPSFGVAGSKKAEFCCEHKKVGMVNVKKYKRC 49
            H  C K+P++GVAGSKK EFC +H + GMVNV   KRC
Sbjct:   66 HENCTKRPTYGVAGSKKREFCSQHARDGMVNVNN-KRC 102          
BLAST of mRNA_L-elsbetiae_contig14839.3498.1 vs. uniprot
Match: D7FH54_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH54_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 9.070e-5
Identity = 24/42 (57.14%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    8 KCAYHRGCAKQPSFGVAGSKKAEFCCEHKKVGMVNVKKYKRC 49
            +C    GC   PSFG  GSK+AEFC +H K GM NVK +KRC
Sbjct:   15 RCCLEDGCTTWPSFGKYGSKRAEFCSQHAKPGMTNVK-HKRC 55          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14839.3498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JW94_9PHAE3.670e-663.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY22_ECTSI4.440e-655.56EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FIE1_ECTSI5.160e-554.76EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KW71_9PHAE6.290e-565.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT00_9PHAE8.610e-560.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH54_ECTSI9.070e-557.14EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14839contigL-elsbetiae_contig14839:1826..2173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14839.3498.1mRNA_L-elsbetiae_contig14839.3498.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14839 1724..2173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14839.3498.1 ID=prot_L-elsbetiae_contig14839.3498.1|Name=mRNA_L-elsbetiae_contig14839.3498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp
MTPRKEKKCAYHRGCAKQPSFGVAGSKKAEFCCEHKKVGMVNVKKYKRCN
HHDCTKNPRFGFVGSKKADFCSGHKQDGMVDVYTKRCAHHGCIERPRFGL
VGSKKPEFCSGHKQGG
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