mRNA_L-elsbetiae_contig14726.3435.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14726.3435.1
Unique NamemRNA_L-elsbetiae_contig14726.3435.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14726.3435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14726contigL-elsbetiae_contig14726:408..3616 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size391
Cds size390
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14726.3435.1prot_L-elsbetiae_contig14726.3435.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14726 408..3616 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.6905475-CDS-L-elsbetiae_contig14726:407..5631622815592.6905475-CDS-L-elsbetiae_contig14726:407..563Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14726 408..563 +
1691682978.8877676-CDS-L-elsbetiae_contig14726:407..5631691682978.8877676-CDS-L-elsbetiae_contig14726:407..563Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14726 408..563 +
1622815592.701801-CDS-L-elsbetiae_contig14726:2360..24681622815592.701801-CDS-L-elsbetiae_contig14726:2360..2468Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14726 2361..2468 +
1691682978.8983808-CDS-L-elsbetiae_contig14726:2360..24681691682978.8983808-CDS-L-elsbetiae_contig14726:2360..2468Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14726 2361..2468 +
1622815592.7126026-CDS-L-elsbetiae_contig14726:3490..36161622815592.7126026-CDS-L-elsbetiae_contig14726:3490..3616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14726 3491..3616 +
1691682978.9070232-CDS-L-elsbetiae_contig14726:3490..36161691682978.9070232-CDS-L-elsbetiae_contig14726:3490..3616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14726 3491..3616 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14726.3435.1

>prot_L-elsbetiae_contig14726.3435.1 ID=prot_L-elsbetiae_contig14726.3435.1|Name=mRNA_L-elsbetiae_contig14726.3435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
VEAGADLTAVDRFGNHVEDLRAGMVGAGGSAAASAASGVTALSTGSASKL
CDMITSAREEGVPDAETREKLKRRNAVRRKSGVEIPVQLSPKLEAKQRAP
LSRRGSTRKTGSGSGGSDGSASSRSPGSSG
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mRNA from alignment at L-elsbetiae_contig14726:408..3616+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14726.3435.1 ID=mRNA_L-elsbetiae_contig14726.3435.1|Name=mRNA_L-elsbetiae_contig14726.3435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3209bp|location=Sequence derived from alignment at L-elsbetiae_contig14726:408..3616+ (Laminarionema elsbetiae ELsaHSoW15)
GTGGAAGCCGGAGCAGACCTAACGGCGGTGGACCGGTTCGGGAACCACGT
GGAGGACCTGAGGGCCGGGATGGTGGGGGCCGGCGGGAGCGCGGCCGCCT
CCGCGGCCTCGGGCGTGACCGCCTTGAGCACGGGGTCAGCCTCCAAACTC
TGCGACGTGAGTTAATTACATGCATATGTGGTAGAGTAGTGTAGCAGCCT
CCGAGCTCTGCGACGTGAGTTAAATACATGCATATGTGGTAGAGTAGTGT
AGCAGCCTCCGAGCTCTGCGACGTGAGTTAAATACATGCATATGTGGTAG
AGTAGTGTAGCAGCCTCCAAGCTCTGCGACGTGAGTTAAATACATGCATA
TGTGGTAGAGTAGTGTGGCAGCCTCCGAGCTCTGCGACGTGAGTTATTTT
CATACATACATACATACATATATACCTTTGTGACCACGGGCCCCCAAGGA
TGTTTTGGACTAGAGAGCTAATTTGAGAAACAACAACAACAACAACAACA
ACAACAACAACATAACAGGAGGGGCCCACCCCCCCCCCTCCTGGGTGACC
CCGTTTGGGTCGTCTATTTAGCCAGTCGTAGTGGAGGAAGGGGGCCGGCG
GGGCAGACGACGAATACATACATCAGCCAACAACGGGAAGAAAAAATAAA
AATAAATGTGGTAAAAGTGATGTAGCAGCCAGCCGCCAAGGTCTGCGGCG
TGAGTTACATGCCTATGTGCTAGAGTAACGTGGCAGCCTCCAAGCTCTGG
GACGTGAGCGACATACATTCCAATAAATAGCACGAAAAAAACGTCAGTTG
TATGACAGCAGCAGCAGCAGCAGCAGCTGTCTCTTTCGGTTAAATGAAAG
CTGTAAGGCACACCGCTGAGGGGCAGGCACGGACCTGCCCCCAGCTGTGT
TGGCAAGGGCGGAGCGTCCACACAGAAGCACCCGGTTCAGTACTGTTGCC
GTGGTTTGGAGGGGAGCTGTTTCCGATTCAGACAGCAGCTGAGATCTACA
AATAAACGTGACGATGAAGGACCACAGGTGTTTTCCGCGGCAAAAGAGGC
GGGTGAGTTCAAAATCTTTGGTTCAAAGATCTGGGTTCAAACCTCGAGCT
CCTCTTTTTTCCTTTGGTCTTGCGTCACCCCCTGCCGCTGTGCTCTCATG
AGCTCGCTCCGAACGGTGATGTTGTATGGTAGAGTAACGTAAGTGCGGAA
GTTTCGACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGT
TGTTTTTGTCGTTGCTGCTGTAGTTGTTGTTGTTGTGGTTGTTGGAATAC
CGCAGGTGACACAATATACCCCCCCCCGCGGGACATATTTTCAAAGCTCT
ATCCCTCCCCAGCAAGAAGAGTGCGCCAGTCAGTGCCGAAAGGGGGTGGT
GGCGTTGTTGGAAAGATCTAGTCGAGGGCTGTCCGAAAATGTGCCGTTTG
GTGCTGGTACCCTCTTCGTTTACGGAGTTTTTTAATGGAGCTGTAAAGGT
TGCTTCAGGGGGGTGTGGTATCTTGTGTCATCTACGATACTACTGTGTAT
CTTGCAGCCGTGATTTATCCGAATGGAAACTGACGCGATCCGCGAACCTG
AAATGATGTCATATTATTAGATAACCTCGGCGCGAGAGGAGGGTGCATAC
AATGTAAATTCATACTCCTATAATATGTAGGAACATATTTACCATACGTA
CATAGTAATATATTTTTGCCGGACGAAGAAACATCACGTGATCTCGATGC
TTTTAATCAGAATCAAACTCATTTTTTTTCTTCCAGATGACAGATATAAC
GTCGGCGCGAGAGGAAAAGGTGCATACAATGTAAATCCACATAATATGTA
GGACCTACGTACATGAGTATATGTTTTGGCCAGACGGTAGAAAAATGACG
TGATTTCAATGCCTTTTTTAATCAGAATCAAACTCAAAATCTGTTTTTTC
CAGATGATAACCTCGGCGCGAGAGGAAGGTGTGCCGGACGCGGAGACAAG
AGAAAAGCTCAAGCGGAGGAACGCCGTGAGAAGGAAGAGCGGGGTCGAAA
TCCCGGTGCAGGTATATATAAACTGGTATTTAGTGGTCCGCGGTATTGTG
GATAACCAATATACATTAACAATATATGGGGTGTTTCATTTTATATAATT
ATTACTTATTTGGTTTGGGGCAGGGATAGATTTTATTTATACAAATCCAA
GTCAATAAGCATTTCCCGACTTTTAGGAGACGATATATGGACGATTTGAT
TAATTTCTCTTCGGAGACCGCCTTCCTATCCAATGGATCAAAGATGGAAC
CTAACCCACACTAGAGCAAGGACTCGATATGGGATTCAAACGGTATTCGA
TACAACAGTGACGTAATAGTTGGCGAAGCGAGCAGAAAAACAAAACCTAA
AATAGGTGAAATGTCACGATGTCCCAAAAGAAAAGAAAGTTGAAAAGCGC
GATGCCAAGCAGAGCAATCTATATTTTTAGTGTCCGCCTCTTTGGGGCAC
ATACAGCAGCTGCCGCACACTACAGTATTTATGCGGGTTAACCTCACCGT
CGACGAGGGAAAGGTACGGCTGAACTCTTCTCGCGACAAAAAATCTTAGG
CAAGCACCGCAGACGGGGGGAATGGGGGCGGTCCTCGGGGAGAGGAACCC
TTCTATGGGTGACCACGGTTCACGCTTTGCTATCATACGCTTTGCTACAA
ATACGTTTTGAAAGATAAAGCAGATAATCAAAAATGGAACCTAACCCACA
TTGGAGACGGGACTCCCGTGAGAATTTTCGATATTCCATATAGTGACGTA
GTATTGGGCCGGCTACATATGTACGCTTTGTCATATACGCTTTGCTATCA
CAGGCTTTGCTATATTACGCTTTGCTTTATAATACGCTTTGCTACAAATA
CGCTTTAAAAGATAAAGCAGATAATTAAAAATGGAACCTAACCCACATTG
GAGATGGGACTCCTGTGAGAATTTTCGGTATTCCATATAGTGACGTAATA
TTGGGCCGGCCGAGTAGAAAAACACCTAAAACGCTTTGCTTCTCTACGTG
CGTACATACATATGCCTTGTTGCCGTGCTGCAGCTGTCTCCGAAGCTCGA
GGCAAAGCAGCGGGCCCCGCTGTCGCGAAGAGGCAGCACCCGCAAGACCG
GTAGCGGCAGCGGCGGCAGCGACGGCAGCGCCAGCAGCCGGAGCCCGGGC
TCTTCCGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14726:408..3616+

>mRNA_L-elsbetiae_contig14726.3435.1 ID=mRNA_L-elsbetiae_contig14726.3435.1|Name=mRNA_L-elsbetiae_contig14726.3435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=780bp|location=Sequence derived from alignment at L-elsbetiae_contig14726:408..3616+ (Laminarionema elsbetiae ELsaHSoW15)
GTGGAAGCCGGAGCAGACCTAACGGCGGTGGACCGGTTCGGGAACCACGT
GGAGGACCTGAGGGCCGGGATGGTGGGGGCCGGCGGGAGCGCGGCCGCCT
CCGCGGCCTCGGGCGTGACCGCCTTGAGCACGGGGTCAGCCTCCAAACTC
TGCGACGTGGAAGCCGGAGCAGACCTAACGGCGGTGGACCGGTTCGGGAA
CCACGTGGAGGACCTGAGGGCCGGGATGGTGGGGGCCGGCGGGAGCGCGG
CCGCCTCCGCGGCCTCGGGCGTGACCGCCTTGAGCACGGGGTCAGCCTCC
AAACTCTGCGACATGATAACCTCGGCGCGAGAGGAAGGTGTGCCGGACGC
GGAGACAAGAGAAAAGCTCAAGCGGAGGAACGCCGTGAGAAGGAAGAGCG
GGGTCGAAATCCCGGTGCAGATGATAACCTCGGCGCGAGAGGAAGGTGTG
CCGGACGCGGAGACAAGAGAAAAGCTCAAGCGGAGGAACGCCGTGAGAAG
GAAGAGCGGGGTCGAAATCCCGGTGCAGCTGTCTCCGAAGCTCGAGGCAA
AGCAGCGGGCCCCGCTGTCGCGAAGAGGCAGCACCCGCAAGACCGGTAGC
GGCAGCGGCGGCAGCGACGGCAGCGCCAGCAGCCGGAGCCCGGGCTCTTC
CGGTCTGTCTCCGAAGCTCGAGGCAAAGCAGCGGGCCCCGCTGTCGCGAA
GAGGCAGCACCCGCAAGACCGGTAGCGGCAGCGGCGGCAGCGACGGCAGC
GCCAGCAGCCGGAGCCCGGGCTCTTCCGGT
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