mRNA_L-elsbetiae_contig1029.332.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: D8LLL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL5_ECTSI) HSP 1 Score: 300 bits (769), Expect = 6.200e-98 Identity = 148/206 (71.84%), Postives = 173/206 (83.98%), Query Frame = 2 Query: 191 VELQVKPCPSPCSLPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLDKPGILITADQVCLFEE------EIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVENA 790 VELQV+P P PCSLPIVLGSSS +RR +M+ LGW+FSTA+PD+DEKAIRDPDPRKMCAEIARAKARAL + LDKP +LITADQVCLF+E E+REKP++ +EA FL SYS +SVKTLSALCVTNL+ GR +EGVHE+TV W+++ +VVD V+ARG VM SAGGFALE+P LR LVDKIEGSVDSV GL V+LLC LVE A Sbjct: 23 VELQVQPRPKPCSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSCRSVKTLSALCVTNLDNGRAAEGVHESTVAWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVELLCTLVERA 228
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A7S2XZD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZD4_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.650e-53 Identity = 95/199 (47.74%), Postives = 134/199 (67.34%), Query Frame = 2 Query: 191 VELQVKPCPSPCSLPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLD-KPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVE 784 V + +P P +PI+LGSSS++R+ V++ GW FS +PDIDEKAIR +P ++ I+R K AL+ + P ILI +DQV F+ IREKP+N +A +L+SYSG SV T+S + VTN +G+ +EGV ATV W + V++ VVARG +M+SAGGF +ED DL PLV I+G+ DSV GL + L+C L++ Sbjct: 6 VRFETRPQPQT-EIPIILGSSSTNRKQVLQTAGWDFSCMSPDIDEKAIRCENPEELVILISRGKTEALLPRVTGSPSILICSDQVVSFQGTIREKPENEDQARAYLSSYSGNSVSTVSGVMVTNTGSGKSAEGVDVATVHWDTISPEVIERVVARGEIMTSAGGFRIEDVDLSPLVKNIQGTKDSVLGLPLALVCDLID 203
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A7S3M630_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M630_9STRA) HSP 1 Score: 167 bits (424), Expect = 9.370e-46 Identity = 87/203 (42.86%), Postives = 134/203 (66.01%), Query Frame = 2 Query: 194 ELQVKPCPSPCSLPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALV-----QSLDKPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVEN 787 ++Q +PCP+ ++ ++ G+SS+ R+ V++ L W + DIDEKAIR DP +M IA+AKA A++ Q+ +P +L+T DQ+ L +REKP++ EA +L+SYSG +V T+SA+ VT++ +G + ATV+W+D+ + VV+ VV RG VMSSAGGF +ED DL L+ I+ VDSV G+ VDL L+++ Sbjct: 48 QVQPQPCPAH-NMKLIFGTSSACRKNVIDALKWDYEQICADIDEKAIRHDDPMEMPVLIAKAKAEAIMEKERMQTWTEPAVLLTFDQIVLHRTNVREKPESRAEAVEYLSSYSGDAVSTVSAVVVTHIPSGIQMSSIDIATVYWRDISSEVVERVVDRGEVMSSAGGFLIEDEDLNGLIKGIDRPVDSVMGMPVDLTKRLIKD 249
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A1G2MS12_9BACT (7-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 TaxID=1802312 RepID=A0A1G2MS12_9BACT) HSP 1 Score: 161 bits (407), Expect = 3.010e-44 Identity = 79/185 (42.70%), Postives = 125/185 (67.57%), Query Frame = 2 Query: 230 LPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLDKPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVE 784 + I+LGS+S R+ V++ +G+++ +PDIDEKAIR DP K+ +A AKA+AL+ + +P ++IT DQV ++ +IREKP+N +EA FL SY +T SA+ VTN G+ + GV A V++K++P ++D VV +G + ++AGG +ED L P +++I+G+VDS+ GL LL L+E Sbjct: 1 MKIILGSASKWRKGVIDTMGFEYEVMSPDIDEKAIRLRDPDKLVLALAEAKAKALLTKVKEPALIITGDQVVVWNGQIREKPQNEKEAGYFLESYCEHPAETHSAVMVTNTANGKHAMGVDVARVYFKNIPKEIIDEVVKKGAIYTTAGGIQMEDALLAPYIERIDGTVDSLKGLPKALLTKLME 185
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A554MGT6_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Parcubacteria group bacterium Greene0714_21 TaxID=2017158 RepID=A0A554MGT6_9BACT) HSP 1 Score: 155 bits (391), Expect = 7.390e-42 Identity = 78/185 (42.16%), Postives = 120/185 (64.86%), Query Frame = 2 Query: 230 LPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLDKPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVE 784 + I+LGS+S R+ V+E+ G++F A DIDEKAIR DP+++ +A+AKA L+ + +P +LITADQV ++ +I EKP+NA+EA FL Y+ + ++A VTN ETG+ TV++K P V++ ++ G + S AG F+LEDP + P VD IEG++DS+ GL +L L++ Sbjct: 1 MKIILGSASKQRKRVLERAGYRFEVMAADIDEKAIRLDDPKELTMALAKAKAEVLLPQIKEPALLITADQVVVWNGQILEKPENAEEARQFLRGYAQYPAQPVNATVVTNTETGKQIGENDINTVYFKPFPDEVIEQLIHEGNIFSQAGAFSLEDPLVAPYVDHIEGTLDSIEGLPFELTQRLLK 185
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A0G1WSY9_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Parcubacteria group bacterium GW2011_GWA2_51_12 TaxID=1618856 RepID=A0A0G1WSY9_9BACT) HSP 1 Score: 152 bits (383), Expect = 1.080e-40 Identity = 78/183 (42.62%), Postives = 118/183 (64.48%), Query Frame = 2 Query: 236 IVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLDKPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVE 784 I+LGS S +R ++++ G++F P+IDEKAIR DP+K+ A +ARAK AL+ + +LIT+DQV FE +IREKP+ EA FL + + +T +A+ VTN TG+ + G+ A VF+K +P +V++ ++ G S AGGFA E P L P + +EG +DS+ GL ++L AL+E Sbjct: 3 IILGSQSKNRADILQEAGFEFDVLPPNIDEKAIRSSDPKKLPALLARAKTDALLPKISGEALLITSDQVVSFEGQIREKPETEAEARKFLETGHESANETYTAVEVTNTSTGKRASGLDIARVFFKKIPPAVINDFISSGEPFSHAGGFAAESPLLAPYIVGVEGEMDSILGLPMNLTRALIE 185
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A1G2R879_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_48_16 TaxID=1802453 RepID=A0A1G2R879_9BACT) HSP 1 Score: 152 bits (383), Expect = 1.150e-40 Identity = 75/187 (40.11%), Postives = 118/187 (63.10%), Query Frame = 2 Query: 230 LPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLDKPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVENA 790 + I+LGS+S R+ V+E++G+ F IDEKAIR+ DP+K+ +A+AKA AL + +P +LITADQV + +I EKP+N ++A +FL Y+ K +++ VTN ETG G E T++ + +P V++ ++ G + S AG +AL DP + P +D++EGS+DS GL +L L+ A Sbjct: 1 MKIILGSASKQRKGVLEKMGYVFEVMTAGIDEKAIREVDPKKLTMALAKAKAEALRSRIKEPALLITADQVVVCNGQILEKPENLEQARSFLRGYADYPAKPTNSILVTNTETGVQVGGSDENTIYLRPLPEDVIEQLIKEGNIFSWAGAYALIDPLIVPYIDRVEGSIDSAEGLPRELTERLLREA 187
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A1G2C222_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Komeilibacteria bacterium RIFOXYC1_FULL_37_11 TaxID=1798555 RepID=A0A1G2C222_9BACT) HSP 1 Score: 151 bits (381), Expect = 2.470e-40 Identity = 71/183 (38.80%), Postives = 119/183 (65.03%), Query Frame = 2 Query: 236 IVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLDKPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVE 784 I+LGS+S R+ V+E LG++F DIDE+AIRD +P+K+ +++A AKA L++ + P +L+TADQV + IREKP++ QEA FL SY +T++ + VT+ ETGR E A +++K +P +++ ++++G + AGGF++ DP ++P + IEG +S+ GL + L++ Sbjct: 8 IILGSASLGRKKVLEDLGYKFDVLISDIDERAIRDSNPKKLTSKLANAKALVLLEKIKFPALLVTADQVVYWNGIIREKPQSPQEARDFLNSYEKFPAETVNTVVVTDTETGRKVEASDSAKIYFKKIPNQIIEKLISKGDIFQQAGGFSIWDPLVKPYIKNIEGEEESIIGLPTKITKKLLD 190
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A1G2R322_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_47_12 TaxID=1802451 RepID=A0A1G2R322_9BACT) HSP 1 Score: 150 bits (380), Expect = 2.990e-40 Identity = 75/179 (41.90%), Postives = 115/179 (64.25%), Query Frame = 2 Query: 230 LPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLDKPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDL 766 + I+LGS+S R+ V+E+ G+ F DIDEKAIRD DP+K+ +ARAKA AL + +P +LITADQV L+ +I EKP++ ++A FL Y+ + ++A+ VTN +TG E TV++ P V++ ++ G + S AG F+LEDP + P ++ IEG++DS+ GL +L Sbjct: 1 MKIILGSASKQRKRVLERWGYSFEVMTADIDEKAIRDDDPKKLTMALARAKAEALRPKIKEPVLLITADQVVLWNGQILEKPESPEQARRFLKGYAQYPAQPVNAVVVTNTQTGVQLGENDENTVYFHKFPDDVIEQLILEGNIFSQAGAFSLEDPLITPYIEHIEGTLDSIEGLPKEL 179
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Match: A0A0K9NID8_ZOSMR (Maf family protein, putative, expressed n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NID8_ZOSMR) HSP 1 Score: 149 bits (375), Expect = 4.240e-39 Identity = 81/206 (39.32%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 209 PCPSPCSLPIVLGSSSSHRRAVMEQLGWQFSTAAPDIDEKAIRDPDPRKMCAEIARAKARALVQSLD------------KPGILITADQVCLFEEEIREKPKNAQEANTFLASYSGQSVKTLSALCVTNLETGRVSEGVHEATVFWKDMPTSVVDGVVARGLVMSSAGGFALEDPDLRPLVDKIEGSVDSVFGLAVDLLCALVENA 790 P S I+LGSSSS RR ++E++G+QFS DIDEKAIR +P ++ +A+AKA A+++ L +P +LITADQV + E IREKP + +EA F+ SYS T+ ++ VTNL+TG A V++ ++P V+D ++ G V+ AGG +E P P V + G++DSV G DL L++ A Sbjct: 8 PAQSSHPFKIILGSSSSSRRLILEEMGYQFSIMTADIDEKAIRMEEPEELVMTLAQAKADAILEKLKGTDGYYTENDDGQPTLLITADQVVVHEGVIREKPSSKEEARQFVKSYSNGCASTVGSVLVTNLKTGIKKGACDTAEVYFHEIPDEVIDNLIEEGTVLYVAGGLLVESPLTSPFVSAMVGTIDSVMGFPKDLAEKLIQEA 213 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1029.332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1029.332.1 >prot_L-elsbetiae_contig1029.332.1 ID=prot_L-elsbetiae_contig1029.332.1|Name=mRNA_L-elsbetiae_contig1029.332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp MDSIGSSGGGGGGSTAWKSISSSGSRRSQEYCGVELQVKPCPSPCSLPIVback to top mRNA from alignment at L-elsbetiae_contig1029:10317..13025+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1029.332.1 ID=mRNA_L-elsbetiae_contig1029.332.1|Name=mRNA_L-elsbetiae_contig1029.332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2709bp|location=Sequence derived from alignment at L-elsbetiae_contig1029:10317..13025+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1029:10317..13025+ >mRNA_L-elsbetiae_contig1029.332.1 ID=mRNA_L-elsbetiae_contig1029.332.1|Name=mRNA_L-elsbetiae_contig1029.332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig1029:10317..13025+ (Laminarionema elsbetiae ELsaHSoW15)back to top |