prot_L-elsbetiae_contig14337.3204.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14337.3204.1
Unique Nameprot_L-elsbetiae_contig14337.3204.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length227
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig14337.3204.1 vs. uniprot
Match: D8LRK5_ECTSI (Yae1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK5_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 7.160e-24
Identity = 130/228 (57.02%), Postives = 143/228 (62.72%), Query Frame = 0 
Query:    1 MEEKKQDCFGSDGVDEFFGADVEQEEAQPNTMAESRELAAIRERLTTLGYQDGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA----RAALVASHERPAEAGVAGAAHLGPAENNSTLEDGTSASCVEPRAGGGESESXXXXXXXXXXXXXXXXXXXXRLRESGAKDTAVMGAADGLQELVEELRNGILLGADGPGAPDRAEVLRRVRLAGPAGEAVADGL 224
            MEEK+ + FG DGVDEFFG DVE+E  Q   MA+ RELAA++ RLTTLGYQDGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + A         +AG  G   L  A  +ST     SA+   P    G SE   XXXXXXXXXX               K +   G A+ LQ LV ELR   LLG DGPG PDRAEVLRR+R    AG AVADGL
Sbjct:    1 MEEKRPEIFGVDGVDEFFGDDVEEEREQSRDMAD-RELAALQARLTTLGYQDGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKQAARGGQSTEKDAGTVGGLRLETAAGSSTSGAALSAA---PLGSTGASEIAGXXXXXXXXXXAVSQPVEGY---RNTKTSPAAGTAEDLQRLVGELRRASLLGPDGPGVPDRAEVLRRLRXXXXAGVAVADGL 221
[Close]
BLAST of mRNA_L-elsbetiae_contig14337.3204.1 vs. uniprot
Match: A0A6H5JF48_9PHAE (Yae1_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF48_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 6.970e-10
Identity = 36/56 (64.29%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:  169 KDTAVMGAADGLQELVEELRNGILLGADGPGAPDRAEVLRRVRLAGPAGEAVADGL 224
            K    +G A+ LQ LV ELR   LLG DGPG PDRAEVLRR+RL   AG AVADGL
Sbjct:  108 KTFPAVGTAEDLQRLVGELRRASLLGPDGPGVPDRAEVLRRLRLXXXAGVAVADGL 163
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14337.3204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRK5_ECTSI7.160e-2457.02Yae1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JF48_9PHAE6.970e-1064.29Yae1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019191Essential protein Yae1, N-terminalPFAMPF09811Yae1_Ncoord: 49..85
e-value: 1.2E-7
score: 31.3
IPR038881Yae1-likePANTHERPTHR18829FAMILY NOT NAMEDcoord: 12..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14337contigL-elsbetiae_contig14337:1491..2707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14337.3204.1mRNA_L-elsbetiae_contig14337.3204.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14337 1491..2707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14337.3204.1 ID=prot_L-elsbetiae_contig14337.3204.1|Name=mRNA_L-elsbetiae_contig14337.3204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
MEEKKQDCFGSDGVDEFFGADVEQEEAQPNTMAESRELAAIRERLTTLGY
QDGVDDGVQEAVQGGFDQGYAVGAAAGWEAGSLYGAAAAARAALVASHER
PAEAGVAGAAHLGPAENNSTLEDGTSASCVEPRAGGGESESIAAAALSAA
ESTTAVSSQRRRLRESGAKDTAVMGAADGLQELVEELRNGILLGADGPGA
PDRAEVLRRVRLAGPAGEAVADGLAD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019191Essential_protein_Yae1_N
IPR038881Yae1-like