prot_L-elsbetiae_contig143.3187.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig143.3187.1
Unique Nameprot_L-elsbetiae_contig143.3187.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length237
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig143.3187.1 vs. uniprot
Match: A0A6H5K372_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.360e-14
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 0 
Query:   84 GFGNGGAVVVFQLLMQRWSLRPWVVVPRTLVATKEQLALMDEDHSRIRNTN 134
            G G+ G VVVFQLL+QRW LRPWVVVPRTLVATKE+LALMDEDHSR+ +++
Sbjct: 1717 GGGHEGTVVVFQLLVQRWELRPWVVVPRTLVATKEKLALMDEDHSRVSSSS 1767
[Close]
BLAST of mRNA_L-elsbetiae_contig143.3187.1 vs. uniprot
Match: D8LMA8_ECTSI (Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.570e-7
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:   84 GFGNGGAVVVFQLLMQRWSLRPWVVVPRTLVATKEQLAL 122
            G G+ G VVVFQLL+QRW LRPWVVVPRTLVATKE++ +
Sbjct: 1776 GGGHEGTVVVFQLLVQRWELRPWVVVPRTLVATKEKVVV 1814
[Close]
BLAST of mRNA_L-elsbetiae_contig143.3187.1 vs. uniprot
Match: A0A835YZK0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZK0_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 9.370e-5
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:   86 GNGGAVVVFQLLMQRWSLRPWVVVPRTLVATKEQLALMDEDH 127
            G   A+ ++QL++QRW LRPWV  PR+L+AT  +L L DE H
Sbjct:  604 GRESALALYQLVLQRWPLRPWVAAPRSLLATASELVLCDESH 645
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig143.3187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K372_9PHAE1.360e-1476.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMA8_ECTSI1.570e-774.36Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ecto... [more]
A0A835YZK0_9STRA9.370e-552.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig143contigL-elsbetiae_contig143:41980..43546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig143.3187.1mRNA_L-elsbetiae_contig143.3187.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig143 41980..43546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig143.3187.1 ID=prot_L-elsbetiae_contig143.3187.1|Name=mRNA_L-elsbetiae_contig143.3187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
GFGTREADSPEGLTARELSAKGAYEREGFAVVFPPAASPSLAAGATSGGD
GEASQFSSVCDDARGDAGGATAPGDDGGGGGVDGFGNGGAVVVFQLLMQR
WSLRPWVVVPRTLVATKEQLALMDEDHSRIRNTNDGSSLLGVPWESATAT
AASTPARSPPPPPPPPFQGGDVSPPRESAGEVFSPERGWSTGVDPGYFAD
VRQASPLNDDDSNSSYSGAFPPSSPGGGRGDRGGAAG
back to top