mRNA_L-elsbetiae_contig1423.3140.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1423.3140.1
Unique NamemRNA_L-elsbetiae_contig1423.3140.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 1.490e-117
Identity = 167/199 (83.92%), Postives = 179/199 (89.95%), Query Frame = 1 
Query:    7 KIFQTLAVAAATVFGTACADGSVTEVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGEL 603
            KIFQ L +  ATV GT  AD  VT+VTHRV+FDISI G  AGRITMGLFGNAVPKTVENFRQLCTGEAGPG VYRKP+HYKGSAFHR+IPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFP EL+H+K GVLSMANSGK+TNGSQFFICTV TPWL+GKHVIFGQVE+ S+ELV  IEK+GSRSGA SEKVEITDSGEL
Sbjct:    2 KIFQALILGMATVAGTVSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 200
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BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA)

HSP 1 Score: 269 bits (687), Expect = 4.320e-89
Identity = 130/178 (73.03%), Postives = 148/178 (83.15%), Query Frame = 1 
Query:   70 SVTEVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGEL 603
            +V  VT  VFFD+ I GK  GRI MGL+G AVPKTVENFR LCTGE G G VY KP+ YKGS+FHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFP EL H + G+LSMAN+G NTNGSQFFI TVATPWLDGKHVIFG+V +G +++V  IEK+GS+SG P  KV++ DSGE+
Sbjct:   20 AVDSVTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLEG-MDVVKSIEKLGSQSGRPQAKVKVADSGEI 196
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BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A0D2MNZ0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MNZ0_9CHLO)

HSP 1 Score: 241 bits (615), Expect = 4.400e-78
Identity = 128/195 (65.64%), Postives = 149/195 (76.41%), Query Frame = 1 
Query:   22 LAVAAATVFGTACADGSVTEVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGELK 606
            LA+ A+TV   A  D    EVTH+VFFDI I GK AGRI MGLFG+ VPKTVENFR LCTGE G G    KP+H+KGS FHRIIPQFM+QGGDFT G GTGGESIYG KF DE F  +L H   G LSMAN+G NTNGSQFFI TV T WLDG+HV+FG+V +G +++V+++E IGS SG PS+KV I DSGE+K
Sbjct:   12 LAICASTVLVEA-KDKKKAEVTHKVFFDIEIDGKPAGRIVMGLFGDIVPKTVENFRALCTGEKGTGKS-GKPLHFKGSVFHRIIPQFMIQGGDFTRGDGTGGESIYGEKFADENF--KLKHKAPGYLSMANAGPNTNGSQFFITTVKTAWLDGRHVVFGKVIEG-MDVVLKVEAIGSGSGTPSKKVTIADSGEIK 201
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BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC)

HSP 1 Score: 240 bits (613), Expect = 5.560e-78
Identity = 119/175 (68.00%), Postives = 142/175 (81.14%), Query Frame = 1 
Query:   79 EVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGEL 603
            +VTH+VFFDI++ G+ AGRI MGL+G+ VPKTVENFR LCTGE G G    KP+HYKGS FHR+IP FMLQGGDFTHGTGTGGESIYG KF+DE F  +L H   G LSMAN+GKNTNGSQFFI TV T WLDGKHV+FG+V +G +++V ++E +GS+SG  S+ VEI DSGEL
Sbjct:   20 KVTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLEG-MDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190
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BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A7S3KS35_EUPCR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KS35_EUPCR)

HSP 1 Score: 239 bits (611), Expect = 1.320e-77
Identity = 120/196 (61.22%), Postives = 150/196 (76.53%), Query Frame = 1 
Query:   16 QTLAVAAATVFGTACADGSVTEVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGEL 603
             T+A+  A +   A A+  + EVTH+V+FD+S+ G+  GR+  GLFG  VPKTVENFR LCTGE G G+  +KP+HYKGS FHRIIPQFM QGGDFT+  GTGGESIYG KF+DE F  EL H+K  +LSMAN+G NTNGSQFFI  V TPWLDG+H +FG+V +G  E+V ++EKIGS++G PS++V I DSGEL
Sbjct:    4 STIAIFFALLVAFATAEDPIAEVTHKVYFDVSVGGENVGRVVFGLFGGVVPKTVENFRALCTGEKGEGS-NKKPLHYKGSPFHRIIPQFMAQGGDFTNENGTGGESIYGHKFEDENF--ELKHSKPYLLSMANAGPNTNGSQFFITFVVTPWLDGRHTVFGEVLEGQ-EIVDQLEKIGSQTGKPSKEVRIVDSGEL 195
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BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A250XMN2_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XMN2_9CHLO)

HSP 1 Score: 239 bits (609), Expect = 2.850e-77
Identity = 118/175 (67.43%), Postives = 141/175 (80.57%), Query Frame = 1 
Query:   79 EVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGEL 603
            E+TH+VFFDI I G  AGR+ MGLFG+ VPKTVENFR LCTGE G GT   KP+HYKGSAFHRIIPQFM+QGGDFT G GTGGESIYG +F DE F  +L H + G LSMAN+G++TNGSQFFI TV T WLDGKHV+FG+V +G ++L+ ++E +G+ SG PS+KV I DSGEL
Sbjct:   25 EITHKVFFDIEIDGAPAGRVVMGLFGDTVPKTVENFRALCTGEKGTGTS-GKPLHYKGSAFHRIIPQFMIQGGDFTRGDGTGGESIYGSRFPDENF--KLKHTQPGYLSMANAGRDTNGSQFFITTVKTSWLDGKHVVFGKVLEG-MDLIYKVEALGTGSGKPSKKVVIADSGEL 195
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BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A5C5WTT8_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WTT8_9BACT)

HSP 1 Score: 238 bits (608), Expect = 4.610e-77
Identity = 122/176 (69.32%), Postives = 140/176 (79.55%), Query Frame = 1 
Query:   79 EVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGELK 606
            EVTH+V+FD+SI GK AGRITMGLFG  VP+TVENFR LCTGEAG  T    P+HYKGS FHR+IP FMLQGGDFT G GTGGESIYG KFDDEAF    VHN  G+LSMAN+G+NTNGSQFFI TV TP L+G+HV+FG+V DG + LV +IE +GS+SGA   K+ I D GELK
Sbjct:   30 EVTHKVYFDVSIDGKEAGRITMGLFGKDVPQTVENFRALCTGEAGK-TDSGVPLHYKGSVFHRVIPNFMLQGGDFTAGNGTGGESIYGEKFDDEAFT--FVHNMPGILSMANAGRNTNGSQFFITTVPTPHLNGRHVVFGKVIDG-MALVKKIESLGSQSGATRAKIVIADCGELK 201
[Close]
BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: C1EA22_MICCC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EA22_MICCC)

HSP 1 Score: 238 bits (607), Expect = 5.930e-77
Identity = 123/197 (62.44%), Postives = 153/197 (77.66%), Query Frame = 1 
Query:   22 LAVAAATVFGTACADGSVT--EVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGELK 606
            L + +A +   ACA    T  E+T++V+FD+SI G+ AGRITMGL+G AVPKTVENFR LCTGE G G    KP+HYKGS FHRIIPQFMLQGGDFT G G GGESIYG KF DE+F   + H+ AG LSMAN+G NTNGSQFFI T+ T WLDG+HV+FG+V +G +++V ++E +GS+SG PS++V ITDSGEL+
Sbjct:    5 LLILSALMVALACAHAGETPPEITNKVYFDVSIGGQPAGRITMGLYGTAVPKTVENFRALCTGEKGVGN-RGKPLHYKGSIFHRIIPQFMLQGGDFTDGNGRGGESIYGEKFADESFA--IKHSGAGDLSMANAGPNTNGSQFFITTIKTAWLDGRHVVFGKVLEG-MDVVYKVEAVGSQSGKPSKEVVITDSGELE 197
[Close]
BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A8J4Q008_9MYCE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q008_9MYCE)

HSP 1 Score: 237 bits (604), Expect = 3.280e-76
Identity = 118/176 (67.05%), Postives = 141/176 (80.11%), Query Frame = 1 
Query:   79 EVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGELK 606
            +++H+VFFDI I G+AAGRI  GL+G  VPKTVENFR LCTGE G G    KP+HYKGS FHRIIP FM+QGGDFT G GTGGESIYG KF+DE F  ++ H++ G+LSMAN+G NTNGSQFFI TV T WLDG+H +FG+V +G ++LV +IEKIGS SGAPS+ V I DSGELK
Sbjct:   46 KISHKVFFDIEIDGQAAGRIVFGLYGKTVPKTVENFRALCTGEKGTGAS-GKPLHYKGSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFEDENF--KIKHSQPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVLEG-MDLVSKIEKIGSGSGAPSKVVTIADSGELK 217
[Close]
BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Match: A0A835Y0M8_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0M8_9CHLO)

HSP 1 Score: 236 bits (602), Expect = 5.600e-76
Identity = 121/176 (68.75%), Postives = 137/176 (77.84%), Query Frame = 1 
Query:   76 TEVTHRVFFDISIAGKAAGRITMGLFGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFICTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGEL 603
            T VTH+V+FDI I GK  GRI MGL+GN VPKTV+NFR LCTGE G GT   KP+ YKGS FHRIIPQFMLQGGDFT G GTGGESIYG +F DE F   L H   GVLSMAN+G +TNGSQFFI TV T WLDG+HV+FG+VEDG ++LV +IE  GS SG PS+ V+I DSGEL
Sbjct:   40 TTVTHKVYFDIEIDGKPEGRIVMGLYGNTVPKTVDNFRALCTGEKGQGTS-GKPLTYKGSIFHRIIPQFMLQGGDFTRGDGTGGESIYGSRFPDENFA--LKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVEDG-MDLVYKIESYGSSSGKPSKTVKIVDSGEL 211
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1423.3140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6P5_ECTSI1.490e-11783.92Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A835ZLK1_9STRA4.320e-8973.03Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A0D2MNZ0_9CHLO4.400e-7865.64Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monora... [more]
A0A7S1FIF5_NOCSC5.560e-7868.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctil... [more]
A0A7S3KS35_EUPCR1.320e-7761.22Peptidyl-prolyl cis-trans isomerase n=1 Tax=Euplot... [more]
A0A250XMN2_9CHLO2.850e-7767.43Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamy... [more]
A0A5C5WTT8_9BACT4.610e-7769.32Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubrip... [more]
C1EA22_MICCC5.930e-7762.44Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microm... [more]
A0A8J4Q008_9MYCE3.280e-7667.05Peptidyl-prolyl cis-trans isomerase n=1 Tax=Polysp... [more]
A0A835Y0M8_9CHLO5.600e-7668.75Peptidyl-prolyl cis-trans isomerase n=1 Tax=Edapho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1423contigL-elsbetiae_contig1423:11312..15951 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.1
Seed ortholog evalue2.2e-92
Seed eggNOG ortholog2880.D7G6P5
KEGG koko:K01802
Hectar predicted targeting categorysignal peptide
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Ec32 orthologEc-26_000140.1
Exons6
Model size609
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1423.3140.1prot_L-elsbetiae_contig1423.3140.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1423 11312..15951 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815567.5842884-CDS-L-elsbetiae_contig1423:11311..113921622815567.5842884-CDS-L-elsbetiae_contig1423:11311..11392Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 11312..11392 +
1691682964.1940207-CDS-L-elsbetiae_contig1423:11311..113921691682964.1940207-CDS-L-elsbetiae_contig1423:11311..11392Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 11312..11392 +
1622815567.595315-CDS-L-elsbetiae_contig1423:11789..118961622815567.595315-CDS-L-elsbetiae_contig1423:11789..11896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 11790..11896 +
1691682964.2118435-CDS-L-elsbetiae_contig1423:11789..118961691682964.2118435-CDS-L-elsbetiae_contig1423:11789..11896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 11790..11896 +
1622815567.6069598-CDS-L-elsbetiae_contig1423:13576..136671622815567.6069598-CDS-L-elsbetiae_contig1423:13576..13667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 13577..13667 +
1691682964.220096-CDS-L-elsbetiae_contig1423:13576..136671691682964.220096-CDS-L-elsbetiae_contig1423:13576..13667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 13577..13667 +
1622815567.6167226-CDS-L-elsbetiae_contig1423:13841..139311622815567.6167226-CDS-L-elsbetiae_contig1423:13841..13931Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 13842..13931 +
1691682964.2280054-CDS-L-elsbetiae_contig1423:13841..139311691682964.2280054-CDS-L-elsbetiae_contig1423:13841..13931Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 13842..13931 +
1622815567.6264093-CDS-L-elsbetiae_contig1423:14324..144561622815567.6264093-CDS-L-elsbetiae_contig1423:14324..14456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 14325..14456 +
1691682964.2364194-CDS-L-elsbetiae_contig1423:14324..144561691682964.2364194-CDS-L-elsbetiae_contig1423:14324..14456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 14325..14456 +
1622815567.636103-CDS-L-elsbetiae_contig1423:15843..159511622815567.636103-CDS-L-elsbetiae_contig1423:15843..15951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 15844..15951 +
1691682964.2443311-CDS-L-elsbetiae_contig1423:15843..159511691682964.2443311-CDS-L-elsbetiae_contig1423:15843..15951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1423 15844..15951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1423.3140.1

>prot_L-elsbetiae_contig1423.3140.1 ID=prot_L-elsbetiae_contig1423.3140.1|Name=mRNA_L-elsbetiae_contig1423.3140.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp
MVKIFQTLAVAAATVFGTACADGSVTEVTHRVFFDISIAGKAAGRITMGL
FGNAVPKTVENFRQLCTGEAGPGTVYRKPMHYKGSAFHRIIPQFMLQGGD
FTHGTGTGGESIYGGKFDDEAFPAELVHNKAGVLSMANSGKNTNGSQFFI
CTVATPWLDGKHVIFGQVEDGSLELVMEIEKIGSRSGAPSEKVEITDSGE
LK*
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mRNA from alignment at L-elsbetiae_contig1423:11312..15951+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1423.3140.1 ID=mRNA_L-elsbetiae_contig1423.3140.1|Name=mRNA_L-elsbetiae_contig1423.3140.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4640bp|location=Sequence derived from alignment at L-elsbetiae_contig1423:11312..15951+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGAAGATCTTCCAGACTTTGGCTGTGGCGGCGGCGACCGTATTCGG
GACCGCGTGCGCCGATGGCTCTGTCACTGAGGTGGGGAGGGGGTTCCCTG
AATCTTGCATGCACGCTCAAGTGGATTTAGCAACTACAGCCGAAGTAACG
CACCGCAACAGCGGCGATAGCCTTTTACTCGTGCGTACTCAGATTCCTTG
AAAATATATCAGACTTCTTGCCCCGATCCGAGGAGGATAGCAGCCGACCA
TACTCCAGCCAGCCCACGGGTACCACCGTGTGCAGGCAGCTACAAAGACC
ATGTGGCTCCGGGATGTGAGAAGGAAGGGGCGAAAAAAGTAGACTTCGAC
CGCCGAGTAAGGGCGAGGGAGGTACTACGCCCGCACGGCCTAGCGCGTAC
TGCGTGCGTGTGTGTGTGTGTGGTTTTGCTAGAGTGGATGACCCGCACAT
TCTGCGCTCGTTTGTTGAATACATGCAGGTGACCCACCGGGTTTTCTTCG
ACATCAGCATCGCCGGCAAGGCGGCTGGGCGCATCACCATGGGCTTGTTC
GGCAACGCCGTGCCCAAGACCGTAGAGAACTTCAGGTACAAGTATACTGA
TGTAAATAGAGCAGTGTGTGGGGTGTGGGCTTGAGTTGAAGAAAATGCAA
ATGCGTTACAAGGGTGCTTATCTTCATATCTTTACTTTTTTTCGGGTCCA
CATGAGCCTTAGTCCAGATCTCATGGCAGCACGAAACATGTGTTTTGCTC
TAACGCGGGCTCATATATCGAAGTGGGGTGTGGGGGACTCGAACCCCCTC
GAAGTCTCCGGCCATAGCTGATCACCCGCATTGCAGGGGGCTCCGTGCAA
TAAAAAAATGTCACTGGAGTCCACGCAGGCGGGAAAAAATCTCTTTCAGC
CGTCAGCCTTTTTTTTTCGCTGAGCTCAACCGAGTTACAACCTTTCAGCA
CAACCATACTCCTTACACAGGTCGCAGCTTGCTCTAAAACTTTCAGGGGG
TCTCGTATATGTCCTATTCTATGTCCGCAAGTAGTTTGCAAGCTTTTGTT
TTGTCCTGAGCTCGAGGAATGCTGCGTCGCCGCGACTGCAAGAGGCCAGT
TTGCTGCTGCTTTTTTTGCCCCTCAGCAGCAAACTTCACGCGGCTGTCGG
CCGTCAAAGGAGTTCACGAAATTGCTCGGTGTTTCGGCACAGTGGAGGCA
CATGGGTATGGAGTCATTTCAAGGGTGGAGCATTTTTGGATCCCAGGCAT
GACAGCCACACCAGCGAACATCCAAAGTCACCTCTCTTCACAAAAGGGAA
CAAAATCACGCACCATGAATCTACCTCCAACGATGTTGATTTTTTCCCCA
AAATTTTCCCCGATTTGAACCTTTATCGCTGTGTCGGCGGCCGAAAATAT
TCCCCAAAAAGCTTTACGGTGGGACCAGGCTGTAGCAGAACCCACACAGA
TTCCATAGGAGGGTGGAGGAATTTTGGGTCTCAACTACAGCCGGGGCCAT
TTCGAAACGGGCCAGCGGGGGCTCCGAAATTCCGGCGATCGTGAACATTT
TTTTCCAAAAAGCGCGATACGGAGCCCCCTGCAACGCGGGTGGATGGGTT
GCCATTCAACCTTCCAGGCTTACGCTCCATGCTAGTGGGATTCTTCGCAG
CTACATCTTGTTGCCAGACGGGTTTTTTGTGGCGAGGACTGGTTGATGTA
GTGGACAGCATACGGAATATGCACCCAAAAGTCGTGTTATTTCGCGGACA
GATTGGTCACAAGAAATGTGATTTTCGGTCGCACGCTGACTATATCCCTC
GAGCCACACGAAGCCTGTGACCAGGAGAAAAATATTCCCAAGACTCCCAT
GGGTGTGGGGCGTGTACAGTCTTGAAGGTTTCGCGGCAATCCGTGGGCTA
AGGCCTGGATAGCAGTGTCGCCGTGGTTTAGTTGGCGACACAAGAAATTT
CGCGCGTGTCTCGAGACCCCATTCCCCCCTTCCAAGGGGGAGCCACGGAC
CAGAACATACATTCCGTTTCGCGGCAAATTTCGCTGCCATAAGAGTTGGC
CTTAAATTAGCCTGAGGGTTATCAATTTGGTGCCCCCGTGGGGTACAACG
TAGGTGGTGCACTACACGTTGCTCCTAGGGTCGATCATGAACGAAGTAGA
AATGAAGCTGAAAATATGGTACACTCTCTCCCCTTATCTCGTGTCTCACC
TGATATGTATCTGCCATTGACTTTGATGGTTTCAAAACGATCCTTTTGCA
TCGACGCCCTTACAGGCAGTTGTGTACCGGCGAGGCTGGGCCTGGGACGG
TGTACCGGAAGCCGATGCACTACAAGGGCTCCGCTTTCCACCGCATCATC
CCGCAGGTACGCTTACATTTCGTCACGAAACGCTTGAAACAGAGAGGGCG
TAGTGGGATACATTGGCGCACGACGCATCTCGTTTCACCGCGACCTTCTG
TGGTTTATTCCGCCCCCCCCCCCAACTCGGAAGACTTGCTGCGTGCCTTG
TTGGTGCCATTGCCCCGCATTGCCCCGCAGTTCATGCTGCAGGGCGGCGA
CTTCACCCACGGGACCGGGACGGGAGGCGAGTCTATCTACGGCGGCAAGT
TCGACGACGAGGCCTTCCCTGTGAGTCGCATCGCCACCCACCGCACACAA
TACCAGCGCTTGGGATGTATGTGCAGTGTGTTGATTGTGTGTGAGAAGAG
CGGGCTTCGTCTCCTCCACCGCCCCTAGAGCTGCCGCGTCGAGTTGACCC
CGCTGTCCAGTGTACAGCCTTCCCTTCGATTGGACGAAGTAGGTTGGACA
AAGCACCGGCAGGTGTCTTCCTTCTCTCCCGTGTGTGAAGCTTTCTCAGT
CCAGTTGTTTTCGTTTTCCCCCAGTTTGTTGGGGTGTAGCATCTGTTCGT
CGGGCCTATTGTACAGCTTTGCTGCTCAGTACTCCGCCGCGCTACATGGC
CGTGTCTTGTCACTGCCACTGAGCGAAGACTGTTCATCGCGCGTGTGTAT
TTTCTGTGCGCAGGCTGAGCTGGTCCACAACAAGGCTGGCGTGCTGTCGA
TGGCCAACTCGGGCAAGAACACAAACGGCTCGCAGTTCTTTATTTGCACC
GTGGCTACGCCGTGGTTGGACGGGAAGCACGTCATCTTCGGACAGGTGAG
TTATCAGACATGCGAAGTATGGGTGTGTTTGTGTGTGTTTTCGTCCCAAT
TATTCGGGCGTCTGTCCACTTTTTTCGGTGTGCCACACGTTCCGGTGTGG
TGCACATAGTACTAATTAGTCTTCACGTTTCGGTGCACGTTCTTTGTACA
ACGAGACGTATCCGCCGGGGTCACACAGGAGGTGGTGCATAAACAGGGCT
TTTTCTTATTATTATGTTTTGCCCCATCTTCCTCCTGCGCGGTGCTTGCC
ATGGTTTTATCGCAAAAAATGTTCAGCCGTCCGTTTCCCTTGCCAGCCGT
GAAGTCGAATTTTATTTACTCACGAGCGTTTCAGCTTTTTTCGCGTTCTA
TACACTACAACGTTGCGTTTTTTTCGATCTCAGAAGGATTCGAACTCACA
ACTTTGCTGCTAACGGGTTTCGAGGTTAACCACTGAAATTATTTTTTATC
ATAACTTGACTTTCTCAGTGTTGTGGTTTTGCTTTCTTTCCTTTTCGGCG
AGTTCTCGCCGCTGAGTGCCGTGTTGGTGATGCGGAAAGAACACGCCTGT
AGCTGCTGTACTGATCGAGGGTGTAGAAGAAAGAATGACGCGAATTGATG
CTCCAGTCTTGGAGATTGGGTGATTTTCACCGATTGCGAGTCCTCCGGGC
ACCCACAGTAAAGAAACACGCGCATTGAACGCCCCCCACCAAAAGCCCCC
GCCCTCTCAGGCCTGAGCTGGCACAGGTGCACCAGCCCTTGGGGGCCTTC
GCGAGCAACACAGATGACAGACGTACTGAGCAAAACAACAGATGTTTATA
GCTAAGTGTCGGTGCAGATTTTAGACCCTAGGTCGCTCTGTTAGGGTCGA
ATTAGAGCTGCCTTCCAACACACGTTGGTGCGCTCGGCCAGGCCAGCAGC
AGCAGACAGGGGGTGCTCTGGTGCTGCTCTGCGCACCTGAGAGTTTGCTC
TTCCCGATGTGCGTAGTTTCCTGAAGAGTCTCGAAGCTCTGCTGACGCAA
AATATCGTGCTGCAGTATGTCTCACAACTGGCTCTCTCTCTCTCTTCCTA
GCGATGCCAAGGGTCGTATGGCTGGGTGCGCAAACTGCCACCGTAACGTG
TGTCTACCTCAATAGTCACACCTCTCCAACTCTACTCGTATCTAGGCCTG
TTGGAACAGACCGTGCAAACAGGCGGTAATGAAGATGTACATGTACATTA
ATGTAATGTAGATAGTTGGAATCGTGTGTCGCTATTGATTCGATGGTGGG
GGTGGCGCACACACACCGTGTTTGTTTTTTGTGTTGTAGCTCCACGTCTT
CACGTCACGTTGGTGTTTCTTTGGCCGTTCCTAAGAACAAATCGTCCCGT
CTTCTGTGTTTTGTCTTGGTGTGCCGATCCAGGTCGAGGATGGCAGCCTG
GAGTTGGTGATGGAAATCGAGAAGATCGGAAGCCGAAGCGGAGCTCCTTC
CGAAAAGGTCGAGATCACCGACTCCGGAGAGCTCAAGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1423:11312..15951+

>mRNA_L-elsbetiae_contig1423.3140.1 ID=mRNA_L-elsbetiae_contig1423.3140.1|Name=mRNA_L-elsbetiae_contig1423.3140.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1218bp|location=Sequence derived from alignment at L-elsbetiae_contig1423:11312..15951+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGAAGATCTTCCAGACTTTGGCTGTGGCGGCGGCGACCGTATTCGG
GACCGCGTGCGCCGATGGCTCTGTCACTGAGATGGTGAAGATCTTCCAGA
CTTTGGCTGTGGCGGCGGCGACCGTATTCGGGACCGCGTGCGCCGATGGC
TCTGTCACTGAGGTGACCCACCGGGTTTTCTTCGACATCAGCATCGCCGG
CAAGGCGGCTGGGCGCATCACCATGGGCTTGTTCGGCAACGCCGTGCCCA
AGACCGTAGAGAACTTCAGGTGACCCACCGGGTTTTCTTCGACATCAGCA
TCGCCGGCAAGGCGGCTGGGCGCATCACCATGGGCTTGTTCGGCAACGCC
GTGCCCAAGACCGTAGAGAACTTCAGGCAGTTGTGTACCGGCGAGGCTGG
GCCTGGGACGGTGTACCGGAAGCCGATGCACTACAAGGGCTCCGCTTTCC
ACCGCATCATCCCGCAGGCAGTTGTGTACCGGCGAGGCTGGGCCTGGGAC
GGTGTACCGGAAGCCGATGCACTACAAGGGCTCCGCTTTCCACCGCATCA
TCCCGCAGTTCATGCTGCAGGGCGGCGACTTCACCCACGGGACCGGGACG
GGAGGCGAGTCTATCTACGGCGGCAAGTTCGACGACGAGGCCTTCCCTTT
CATGCTGCAGGGCGGCGACTTCACCCACGGGACCGGGACGGGAGGCGAGT
CTATCTACGGCGGCAAGTTCGACGACGAGGCCTTCCCTGCTGAGCTGGTC
CACAACAAGGCTGGCGTGCTGTCGATGGCCAACTCGGGCAAGAACACAAA
CGGCTCGCAGTTCTTTATTTGCACCGTGGCTACGCCGTGGTTGGACGGGA
AGCACGTCATCTTCGGACAGGCTGAGCTGGTCCACAACAAGGCTGGCGTG
CTGTCGATGGCCAACTCGGGCAAGAACACAAACGGCTCGCAGTTCTTTAT
TTGCACCGTGGCTACGCCGTGGTTGGACGGGAAGCACGTCATCTTCGGAC
AGGTCGAGGATGGCAGCCTGGAGTTGGTGATGGAAATCGAGAAGATCGGA
AGCCGAAGCGGAGCTCCTTCCGAAAAGGTCGAGATCACCGACTCCGGAGA
GCTCAAGTAAGTCGAGGATGGCAGCCTGGAGTTGGTGATGGAAATCGAGA
AGATCGGAAGCCGAAGCGGAGCTCCTTCCGAAAAGGTCGAGATCACCGAC
TCCGGAGAGCTCAAGTAA
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