prot_L-elsbetiae_contig1421.3131.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1421.3131.1
Unique Nameprot_L-elsbetiae_contig1421.3131.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length358
Homology
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BLAST of mRNA_L-elsbetiae_contig1421.3131.1 vs. uniprot
Match: D7FWK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK2_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.780e-15
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0 
Query:   29 GSEKREDENEIPPQEDTTALDPVPQSDPDDPALVASRELIEMESAEVERDLADLDARLAAALADEDYDEAAELDSQMTE 107
            GS    D     P++  T ++ VP+   DDPA+VASRELIE+E+AEVERDLADLDARLA AL DEDYD+AAELD+QMT+
Sbjct: 1075 GSADGNDVEAAKPEDTATHVEAVPRKAEDDPAMVASRELIELEAAEVERDLADLDARLATALTDEDYDQAAELDAQMTQ 1153
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1421.3131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWK2_ECTSI3.780e-1563.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1421contigL-elsbetiae_contig1421:18821..22163 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1421.3131.1mRNA_L-elsbetiae_contig1421.3131.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1421 18816..22949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1421.3131.1 ID=prot_L-elsbetiae_contig1421.3131.1|Name=mRNA_L-elsbetiae_contig1421.3131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=358bp
MTGGSEEDAAEKGGRGEEGDGAVAAVAEGSEKREDENEIPPQEDTTALDP
VPQSDPDDPALVASRELIEMESAEVERDLADLDARLAAALADEDYDEAAE
LDSQMTEVRTRLADFAAQAAALTQPRTARSQIDSVDGGSGGASCGGGGGD
PGGEVSATSPPSGTEQQQQPTEDGVSIAGEDGQGGGSHDAIDSDRVSSDG
VDNDGGGDDGGVDGAGTVEGCATSDTQEGDAVKDVANGPASPVVTDAPEG
STGQEAGAEGAGNGDDDAPARGSDGAEVDEVDVEVSPTLATVEGPAAVDL
DDPRGADETESVAIQAQEGSASEDGDGSNARGGDELESGSVEETPVGQGD
GAGVVDV*
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