prot_L-elsbetiae_contig14189.3111.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14189.3111.1
Unique Nameprot_L-elsbetiae_contig14189.3111.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length55
Homology
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: D8LQR5_ECTSI (Similar to retinoic acid induced 17, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR5_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 2.680e-22
Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    2 TYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            T TR+  +C    VPITCPGRGR CKHLQCFDL TFL+FNKDCAGAAWKCGVCN
Sbjct:  320 TATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCN 373          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: A0A6H5KI42_9PHAE (SP-RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI42_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.680e-22
Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    2 TYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            T TR+  +C    VPITCPGRGR CKHLQCFDL TFL+FNKDCAGAAWKCGVCN
Sbjct:  370 TATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCN 423          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: K0RHT1_THAOC (SP-RING-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHT1_THAOC)

HSP 1 Score: 70.1 bits (170), Expect = 1.100e-12
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 VTYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            VT T++   C  T++PI  P RGR+CKHLQCFDL T+L+ NK   G+ W+C VCN
Sbjct: 1354 VTCTKLSLLCPLTRMPIKTPVRGRDCKHLQCFDLLTYLHSNKTVTGSRWRCPVCN 1408          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: A0A7S2FT40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT40_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.240e-11
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    4 TRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            TR+  +C     PI  P RGR C HLQCFDL TFL  NK+   A W+CGVC+
Sbjct:   15 TRLSVRCPIGLGPIGIPVRGRGCTHLQCFDLVTFLQMNKNYGVARWRCGVCS 66          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: A0A7S3PM10_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PM10_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 4.140e-10
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    9 KCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            KC  +   ++ P RG+ C HL CFDL+TFLNF +D   A+WKC VCN
Sbjct:  324 KCPLSLKRLSIPARGKTCTHLGCFDLETFLNFQRDAKNASWKCIVCN 370          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: Q16PW9_AEDAE (AAEL011495-PA n=2 Tax=Stegomyia TaxID=53541 RepID=Q16PW9_AEDAE)

HSP 1 Score: 62.0 bits (149), Expect = 7.770e-10
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    2 TYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            T T++  KCT T   I  P RGR+CKH+QCFDL+ +L  N  C    W+C VCN
Sbjct:  500 TSTKVSLKCTVTTKRIALPARGRDCKHIQCFDLEAYLALN--CERGNWRCPVCN 551          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: A0A6I8TI10_AEDAE (SP-RING-type domain-containing protein n=3 Tax=Stegomyia TaxID=53541 RepID=A0A6I8TI10_AEDAE)

HSP 1 Score: 62.0 bits (149), Expect = 7.790e-10
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    2 TYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            T T++  KCT T   I  P RGR+CKH+QCFDL+ +L  N  C    W+C VCN
Sbjct:  500 TSTKVSLKCTVTTKRIALPARGRDCKHIQCFDLEAYLALN--CERGNWRCPVCN 551          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: A0A7I8W8W4_9ANNE (DgyrCDS12834 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W8W4_9ANNE)

HSP 1 Score: 61.6 bits (148), Expect = 1.060e-9
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    2 TYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            T TR+  KC  T   I  P RG +C+H+QCFDL+T+L  N  C    WKC VCN
Sbjct:  357 TATRVSLKCPVTYRKIQLPARGHDCRHIQCFDLETYLQMN--CERPTWKCPVCN 408          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: A0A7I8W8W1_9ANNE (DgyrCDS12826 n=8 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W8W1_9ANNE)

HSP 1 Score: 61.6 bits (148), Expect = 1.060e-9
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    2 TYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            T TR+  KC  T   I  P RG +C+H+QCFDL+T+L  N  C    WKC VCN
Sbjct:  527 TATRVSLKCPVTYRKIQLPARGHDCRHIQCFDLETYLQMN--CERPTWKCPVCN 578          
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Match: A0A553PTQ7_TIGCA (SP-RING-type domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PTQ7_TIGCA)

HSP 1 Score: 61.6 bits (148), Expect = 1.070e-9
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    2 TYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWKCGVCN 55
            T  +++  C  T   +T P RG++C+HLQCFDL+++L +N +  G  WKC VCN
Sbjct:  620 TSLKVMLTCPLTFRRMTLPSRGQDCRHLQCFDLESYLKYNAEKGGNGWKCPVCN 673          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14189.3111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQR5_ECTSI2.680e-2277.78Similar to retinoic acid induced 17, partial n=1 T... [more]
A0A6H5KI42_9PHAE2.680e-2277.78SP-RING-type domain-containing protein n=1 Tax=Ect... [more]
K0RHT1_THAOC1.100e-1254.55SP-RING-type domain-containing protein n=1 Tax=Tha... [more]
A0A7S2FT40_9STRA6.240e-1153.85Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3PM10_9STRA4.140e-1053.19Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
Q16PW9_AEDAE7.770e-1050.00AAEL011495-PA n=2 Tax=Stegomyia TaxID=53541 RepID=... [more]
A0A6I8TI10_AEDAE7.790e-1050.00SP-RING-type domain-containing protein n=3 Tax=Ste... [more]
A0A7I8W8W4_9ANNE1.060e-950.00DgyrCDS12834 n=1 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A7I8W8W1_9ANNE1.060e-950.00DgyrCDS12826 n=8 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A553PTQ7_TIGCA1.070e-944.44SP-RING-type domain-containing protein n=1 Tax=Tig... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..55
e-value: 1.2E-13
score: 53.0
IPR004181Zinc finger, MIZ-typePFAMPF02891zf-MIZcoord: 8..55
e-value: 5.1E-14
score: 51.7
IPR004181Zinc finger, MIZ-typePROSITEPS51044ZF_SP_RINGcoord: 1..55
score: 24.923
NoneNo IPR availablePANTHERPTHR10782ZINC FINGER MIZ DOMAIN-CONTAINING PROTEINcoord: 5..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14189contigL-elsbetiae_contig14189:3239..3403 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14189.3111.1mRNA_L-elsbetiae_contig14189.3111.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14189 3239..3403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14189.3111.1 ID=prot_L-elsbetiae_contig14189.3111.1|Name=mRNA_L-elsbetiae_contig14189.3111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=55bp
VTYTRILCKCTPTQVPITCPGRGRNCKHLQCFDLQTFLNFNKDCAGAAWK
CGVCN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR004181Znf_MIZ