prot_L-elsbetiae_contig1418.3106.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1418.3106.1
Unique Nameprot_L-elsbetiae_contig1418.3106.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length70
Homology
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BLAST of mRNA_L-elsbetiae_contig1418.3106.1 vs. uniprot
Match: A0A6H5KFF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF7_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.570e-24
Identity = 57/73 (78.08%), Postives = 60/73 (82.19%), Query Frame = 0 
Query:    1 MKFSTVAASLCVLGSASAFVFPMPVRSAGATRVSASLEEDAVAKTKAREALIGSAGMEQLIKMV---DGRDAE 70
            MKFSTVAASLCVLGSASAFV P+P RS  ATR+SASL+E A  K KAREALIGSAGMEQLIKMV   DG D E
Sbjct:    1 MKFSTVAASLCVLGSASAFVLPVPARSGVATRMSASLDEAAAEKAKAREALIGSAGMEQLIKMVAQDDGEDEE 73
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BLAST of mRNA_L-elsbetiae_contig1418.3106.1 vs. uniprot
Match: D7G1W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W7_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 5.190e-6
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:   33 VSASLEEDAVAKTKAREALIGSAGMEQLIKMV---DGRDAE 70
            +S+SL+E A  K KAREALIGSAGMEQLIKMV   DG D E
Sbjct:    1 MSSSLDEAAAEKAKAREALIGSAGMEQLIKMVAQDDGEDEE 41
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1418.3106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFF7_9PHAE1.570e-2478.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1W7_ECTSI5.190e-670.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.729

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1418contigL-elsbetiae_contig1418:15124..17010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1418.3106.1mRNA_L-elsbetiae_contig1418.3106.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1418 15124..17010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1418.3106.1 ID=prot_L-elsbetiae_contig1418.3106.1|Name=mRNA_L-elsbetiae_contig1418.3106.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=70bp
MKFSTVAASLCVLGSASAFVFPMPVRSAGATRVSASLEEDAVAKTKAREA
LIGSAGMEQLIKMVDGRDAE
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