mRNA_L-elsbetiae_contig14160.3093.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: D8LE51_ECTSI (SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE51_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 5.890e-121 Identity = 275/540 (50.93%), Postives = 325/540 (60.19%), Query Frame = 1 Query: 4 ANLDVVPTEFAALLDYQRIMSQLVLKEALAGVQE--ARDASRSRSLSVKGEIYAACLLDVDDESNGGKQGKKGGKXXXXXXXXXXPCSSPYSPXXXSXXXSPGDGKLYSLKVKPG-PXXXXXGHHRDQAPKSPFWGNELVALSSPTWTTATSSVLGVVQSWDPVYDKLSKRPFGRDTVL-IRLLVCASPGGGDGAGGAGGWLPLGHARECLGRSKKVAGVPVTLSGGASLMTACREFQAVMSVSGLPEAVRRCLLDPSVVGKESRAAXXXXXXXXXXXXXREGPSWRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAWGSAPPP---NVPAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMVGSSVAGGGVAGTEGGEGAEGKGKKXXXXXXKRIVSPLEAATTRVLIVAPSNAAVDELVLRLCQDGIPSPEGGVRFPRVVRVGGGRVDRDAXXXXXXXXXXXXXXXXTNGGGKDGLRSEVVE 1602 ANL VPTEFA+LLDYQ+ MSQLVLKEA+AG+Q+ A SR L V+GE+ A LLDVD E GK+GK G S+P P S DGKLYSL+VK P G+ +D P SPF G ELV+L+SP W +++++LGVVQ+WDPVYDKLS++P + V+ IR+LVC S GGDG GG GGWLPL +ECLG GVPVT+S SL+TACREFQAVMS+ LPE V LL+PS A S RG XXXXXXXXXXXXX + + PPP +VP KLW SL+Q FN SQVQA+RKV +GSPSGFTLLQGPPGTGKTRTIMGIVGVLLAG CPFP G G GA+V +GSS++G +G XXX RIVSPLE A+ R+LIVAPSNAAVDELVLRLCQ+G+P +G VRFPRVVRVGG R D + GG+DG+ S +VE Sbjct: 202 ANLVPVPTEFASLLDYQKTMSQLVLKEAVAGLQQESATKMSRGNVLMVRGEVETANLLDVDGEKRAGKKGKGG---------QPSSASAPLPPPSVSSS----DGKLYSLRVKLILPTVPAYGNGKDYVPASPFRGQELVSLTSPMWRASSNALLGVVQAWDPVYDKLSRKPSTKTVVVKIRILVCVSSTGGDGVGGRGGWLPLKDIQECLGNDN--CGVPVTISSAGSLVTACREFQAVMSLPELPERVHEFLLNPS-------KAPTTLLPRFVVINHLPVSSSRGGREAGGXXXXXXXXXXXXXDLSPP-----SSVYTPXPPPGPSSVPPKLWMSLIQKFNSSQVQAMRKVVDGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGACPFPSGHNSEGGEGGAS-----GSGAKVTIGSSISG---------KGKXXXXXXXXXQKAARIVSPLEKASPRILIVAPSNAAVDELVLRLCQEGVPGVDGRVRFPRVVRVGGPRADGERSGTVDGRG---------GSGGRDGVTSTMVE 691
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A6H5JS06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS06_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 2.600e-120 Identity = 290/579 (50.09%), Postives = 338/579 (58.38%), Query Frame = 1 Query: 4 ANLDVVPTEFAALLDYQRIMSQLVLKEALAGVQE--ARDASRSRSLSVKGEIYAACLLDVDDESNGGKQGKKGGKXXXXXXXXXXPCSSPYSPXXXSXXXSPGDGKLYSLKVKPG-PXXXXXGHHRDQAPKSPFWGNELVALSSPTWTTATSSVLGVVQSWDPVYDKLSKRPFGRDTVLIRLLVCASPGGGDGAGGAGGWLPLGHARECLGRSKKVAGVPVTLSGGASLMTACREFQAVMSVSGLPEAVRRCLLDPSVVGKESRAAXXXXXXXXXXXXXREGPSWRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAWGSA----------------------------------------PPPN---VPAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMVGSSVAGGGVAGTEGGEGAEGKGKKXXXXXXKRIVSPLEAATTRVLIVAPSNAAVDELVLRLCQDGIPSPEGGVRFPRVVRVGGGRVDRDAXXXXXXXXXXXXXXXXTNGGGKDGLRSEVVE 1602 ANL +PTEFA+LLDYQ+ MSQLVLKEA+AG+Q+ A SR L V+GE+ A LLDVD E+ G K+G+ G S+P P S DGKLYSL+VK P G+ +D P SPF G ELV LSSP W +++++LGVVQ+WDPVYDKLS++P + V IR+LVC S GGDG GG GGWLP +ECLG GVPVT+SG SL+TACREFQAVMS+ LPE V L++PS K S PS RG XXXXXXXXXXXXXXXXXXXXXXXX PPP VP KLW SL+Q FN SQVQA+RKV +GSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFP G G GA+V +GSS++G +G KGK+ RIVSPLE A+ R+LIVAPSNAAVDELVLRLCQ+G+P +G VRFPRVVRVGG R D + +GGGKDG+ S VVE Sbjct: 356 ANLVPIPTEFASLLDYQKTMSQLVLKEAVAGLQQESATKMSRGNVLMVRGEVETANLLDVDGENMGRKKGEGG---------EPSSASAPLPPPSVSSS----DGKLYSLRVKLILPTVPAYGNGKDYVPASPFRGQELVYLSSPRWRASSNALLGVVQAWDPVYDKLSRKPSTKTVVKIRILVCVSSTGGDGVGGRGGWLPFKDIQECLGNDN--CGVPVTISGAGSLVTACREFQAVMSLPELPERVHEFLVNPS---KASTTLLPRLFVINHLPV----PSSRGGREAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPGPSGVPPKLWMSLIQKFNSSQVQAMRKVVDGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPSGHSSEGEVS--------GSGAKVTIGSSISG---------KGKGKKGKQKGQQKAARIVSPLEKASPRILIVAPSNAAVDELVLRLCQEGVPGVDGRVRFPRVVRVGGPRADDERSGDVDGRGG--------SGGGKDGMTSTVVE 887
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A8J2WTU9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTU9_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.680e-14 Identity = 66/177 (37.29%), Postives = 88/177 (49.72%), Query Frame = 1 Query: 970 PNVPAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMVGSSVAGGGVAGTEGGEGAEGKGKKXXXXXXKRIVSP---LEAA--TTRVLIVAPSNAAVDELVLRLCQDGIPSPEGGVRFPRVVRVG 1485 P PA LW++L N SQ AI A+ +P F L+QGPPGTGKTRTI+G+ LL G PP + RGPG M+ S + RI +P L+AA + R+L+ APSNAAVDE+ R ++G+P P+G +R R+ RVG Sbjct: 206 PRTPAPLWQALRSSSNASQFAAIAAGADATP--FALVQGPPGTGKTRTILGVCAALLHGDLAEPP----------PPQRSRRGPG---MLSSQTS---------------------MRATTRINAPGGLLQAAERSRRILVTAPSNAAVDEVAARFVREGVPGPDGRIRRVRLCRVG 346
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A7S3MCA3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCA3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.090e-12 Identity = 113/413 (27.36%), Postives = 166/413 (40.19%), Query Frame = 1 Query: 400 GNELVALSSPTWTTATSSVLGVVQSWDPVYD-------------KLSKRPFGRD--------TVLIRLLVCASPGGG-DGAGGAGGWLPLGHARECLGRSKKVAGVPVTLSGGASLMTACREFQAVMSVSGLPEAVRRCLLDPSVVGKESRAAXXXXXXXXXXXXXREG---------PSWRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAWGSAP---PPNVPAKLWRSLLQVFNRSQVQAIRKVAEG------------SPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMVGSSVAG--GGVAGTEGGEGAEGKGKKXXXXXXKRIVSPLEAA--TTRVLIVAPSNAAVDELVLRLCQDGIPSPEGG-VRFPRVVRVG 1485 G +L+ L SP W+ +LG++Q WDP YD +S + RD ++ +LVC G G G+ GGW G V GV +++ ++MT RE QA+MS+ + ++++ +L + A G XXXXXXX A P P NVP LW +L + +N SQ++AI V+ + + +LLQGPPGTGKTRTI+GIV V LAG G R++ G+S+ G G A T+ + + + + ++ TRVLI APSN AVDE+V RL G+ +G + V+R+G Sbjct: 320 GGDLMVLHSPQWS---HPLLGIIQPWDPDYDIKYGINFSVNQSTYISTQQPARDGGKLGQPPLQVVNILVCVDQGDGLSGSADIGGWATQGSI---------VPGVGFSMTAIGNVMTYIRECQALMSLKLINKSLQNMVLTGCFSPNYTAALRAATADQSAADGTSSGYGSSXXXXXXXXXXXXXXXXXDGGIAFASHKPRADKVNRVLSPRRALMEQPINCPENVPMPLWLALRRQYNESQLRAICMVSRRFQEKEYHTGQSTTEASLSLLQGPPGTGKTRTILGIVSVFLAGALNLTAQGT-----------------TRIVAGASLYGETAGEASTKWSDEKLQRPRGGSISHTNTVNGDGQSGGKRTRVLICAPSNTAVDEVVYRLITQGVLDSQGKRMNDLSVIRIG 703
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A1V9ZPB7_9STRA (ATP-dependent helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPB7_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 5.800e-11 Identity = 68/181 (37.57%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 976 VPAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMV---GSSVAGGGVA-----------GTEGGEGAEGKGKKXXXXXXK---RIVSPLEAA-----TTRVLIVAPSNAAVDELVLRLCQDGIPSPEG 1452 +PA +W L + +N SQ+Q++ + +G +LLQGPPGTGKT+TIMGI+ LLA P P APR +V G+S G A G + EGA GK K R VS L A + +LI APSN AVDEL+LRL +DG+ P+G Sbjct: 1355 LPAPVWSQLRETYNSSQLQSVHSILNNYTTGVSLLQGPPGTGKTKTIMGIISGLLAIALPTP-----------TLETAPRKAIKPALVDFSGTSSLGSVKASSIQQIKNASMGRQRLEGAM-AGKATFRPRPKPTARTVSVLPQAQRGHQSNHILICAPSNGAVDELILRLRKDGLIGPDG 1523
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A067CG60_SAPPC (TFIIS N-terminal domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CG60_SAPPC) HSP 1 Score: 75.9 bits (185), Expect = 1.330e-10 Identity = 70/189 (37.04%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 958 SAPPPNVPAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGA-RVMVGSSVAGGGVAGTEGGEGAEGKGK---KXXXXXXKRIVSPLEAA-----TTRVLIVAPSNAAVDELVLRLCQDGIPSPEGG---VRFPRVVRVGG 1488 S P +P +W L +N SQ+Q++ + +G +LLQGPPGTGKT+TIMGI+ LLA P P A+ PGA + + G++ + EGA G+ K R VS L A T +LI APSN AVDEL+LRL DG+ P+G V P+V V G Sbjct: 1372 STTPLFLPPPVWDQLQTTYNASQLQSVHSILNNYSTGVSLLQGPPGTGKTKTIMGIISGLLAISLPTPTA---PALVDFSGASTSSLPGAVKATSIQQIKNKGMS-RQRLEGAM-AGRPMFKPRPASGPRTVSVLPIANKGPETNHILICAPSNGAVDELILRLRTDGLVGPDGKPVLVSTPKVHAVSG 1555
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A485KG19_9STRA (Aste57867_3966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG19_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.610e-9 Identity = 61/195 (31.28%), Postives = 88/195 (45.13%), Query Frame = 1 Query: 967 PPNVPAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGP-------------GARVMVGSSVAGGGVAGTEGGEGAEGKGKKXXXXXXKRIVSPL------EAATTRVLIVAPSNAAVDELVLRLCQDGIPSPEGG---VRFPRVVRVG 1485 P VP LW + ++N+SQ+Q+I V +G +LLQGPPGTGKT+TI+G+V LL+ P P A P G + +VG+ +G+ +R+ PL ++ + +LI APSN AVDEL+ RL DG+ P G V+ P + R G Sbjct: 1384 PAFVPQALWDVVKPMYNQSQLQSIHSVLSNYDTGVSLLQGPPGTGKTKTILGLVSGLLSVELPTPAKLAPVNRPALNFNAQSDQPKRVSIQQIKNQQLGRQRLVGAM-----------------EGRSSRMGLIQRVSIPLGKSSMTKSQSNHILICAPSNGAVDELISRLLADGLVDPTGNKIRVKAPSIRRQG 1561
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A0M0J369_9EUKA (DNA2 nam7 helicase family protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J369_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 3.650e-9 Identity = 63/182 (34.62%), Postives = 84/182 (46.15%), Query Frame = 1 Query: 955 GSAPPPNV--PAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMVGSSVAGGGVAGTEGGEGAEGKGKKXXXXXXKRIVSPLEAATTRVLIVAPSNAAVDELVLRLCQD---GIPSPEGGVRFPRVVRVG 1485 GSAPPP + P LW ++ N SQ+ AIR G G TL+QGPPGTGKT+TI+GI+ VLLA A + S + + + GEG + + + E VL+ APSNAA+DE+V RL + G+ + G P VVRVG Sbjct: 226 GSAPPPRLQKPPSLWPAIKATHNPSQLAAIRTCLCGR--GVTLIQGPPGTGKTKTILGILSVLLASHS------------------------AHTLTKSERS----SWRDVGEGGDAASTDRHVHLGRAVA---EEPPKHVLVCAPSNAAIDEIVSRLLRHTGPGMLNARGESFLPYVVRVG 374
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: W4GB66_9STRA (TFIIS N-terminal domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GB66_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.870e-9 Identity = 58/171 (33.92%), Postives = 79/171 (46.20%), Query Frame = 1 Query: 976 VPAKLWRSLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMVG------------SSVAGGGVAGTEGGEGAEGKGKKXXXXXXKRIVSPLEAATTRVLIVAPSNAAVDELVLRLCQDGIPSPEG 1452 VP LW L ++N SQ+Q+I V SG +LLQGPPGTGKT+TI+G+V LLA P +R + SSV +AGT G + +++S + + +LI APSN AVDEL+ RL DG+ P+G Sbjct: 1434 VPQSLWDVLRPMYNSSQLQSIHSVLSNYESGVSLLQGPPGTGKTKTILGLVSGLLA--IQLPAAAKTQMPKPAMRFNVQSDAVSRTSIQQIKNQSLGRQRLSSV----MAGTSSRMGV----LQRVPLSSSKLLSEKKVQSNHILICAPSNGAVDELIARLVADGLVGPDG 1594
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Match: A0A1E4THA5_9ASCO (UvrD-like helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4THA5_9ASCO) HSP 1 Score: 70.1 bits (170), Expect = 6.270e-9 Identity = 56/167 (33.53%), Postives = 75/167 (44.91%), Query Frame = 1 Query: 997 SLLQVFNRSQVQAIRKVAEGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPPGGGGXXXXXXXXAAAPRGPGARVMVGSSVAGGGVAGTEGGEGAEGKGKKXXXXXXKRIVSPLEAATT----RVLIVAPSNAAVDELVLRLCQDGIPSPEGGVRFPRVVRVG 1485 +L +V ++ QA A + SGFTL+QGPPGTGKT+TI+ IVG LL A+ KGK +++ S E R+LI APSNAAVDELV+RL ++G+ S G PR+VR+G Sbjct: 228 ALCKVHRCNEPQAAAVFAALNSSGFTLIQGPPGTGKTKTILSIVGSLLT-------------------------------------------------AQSKGKSIAIAGARKVSSADEKTAQKSKKRILICAPSNAAVDELVVRL-KNGLTSTAGQSISPRIVRLG 344 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14160.3093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14160.3093.1 >prot_L-elsbetiae_contig14160.3093.1 ID=prot_L-elsbetiae_contig14160.3093.1|Name=mRNA_L-elsbetiae_contig14160.3093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp QANLDVVPTEFAALLDYQRIMSQLVLKEALAGVQEARDASRSRSLSVKGEback to top mRNA from alignment at L-elsbetiae_contig14160:238..4166+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14160.3093.1 ID=mRNA_L-elsbetiae_contig14160.3093.1|Name=mRNA_L-elsbetiae_contig14160.3093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3929bp|location=Sequence derived from alignment at L-elsbetiae_contig14160:238..4166+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14160:238..4166+ >mRNA_L-elsbetiae_contig14160.3093.1 ID=mRNA_L-elsbetiae_contig14160.3093.1|Name=mRNA_L-elsbetiae_contig14160.3093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3204bp|location=Sequence derived from alignment at L-elsbetiae_contig14160:238..4166+ (Laminarionema elsbetiae ELsaHSoW15)back to top |