prot_L-elsbetiae_contig14115.3069.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14115.3069.1
Unique Nameprot_L-elsbetiae_contig14115.3069.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length60
Homology
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: A0A6H5KSL7_9PHAE (NifU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL7_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.930e-31
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDL 59
            GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL+QRIPEISEVVQSIPNGP+L
Sbjct:  143 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLMQRIPEISEVVQSIPNGPEL 201          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: A0A835Z016_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z016_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.290e-30
Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDLN 60
            GNVRVVEIDGPVVRLEL+GACGSCPSSTMTMKMGLERRL+++IPEISEVVQS+P GP LN
Sbjct:   48 GNVRVVEIDGPVVRLELQGACGSCPSSTMTMKMGLERRLIEKIPEISEVVQSMPEGPQLN 107          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: A0A7R9U202_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U202_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.900e-26
Identity = 47/60 (78.33%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDLN 60
            GNV V EIDGP+VRLEL+GACG+CPSSTMTMKMGLERRL +RIPEISEVVQ++P+ P+L+
Sbjct:  112 GNVAVAEIDGPIVRLELQGACGTCPSSTMTMKMGLERRLKERIPEISEVVQAVPDAPELS 171          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: A0A7S1D6Z8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6Z8_CYCTE)

HSP 1 Score: 102 bits (254), Expect = 1.900e-25
Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDL 59
            GNV++ EIDGPVVRL+LEGACG+CPSST TMKMGLERRL +RIPEI EV+Q++P GPDL
Sbjct:  111 GNVKIQEIDGPVVRLQLEGACGTCPSSTQTMKMGLERRLRERIPEIQEVIQAMPQGPDL 169          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: A0A4D9D2Y8_9STRA (NifU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2Y8_9STRA)

HSP 1 Score: 100 bits (250), Expect = 8.840e-25
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDLN 60
            GNV V EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+
Sbjct:  115 GNVVVSEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALS 174          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: F0Y565_AURAN (NifU domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y565_AURAN)

HSP 1 Score: 97.1 bits (240), Expect = 9.790e-25
Identity = 44/60 (73.33%), Postives = 54/60 (90.00%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDLN 60
            GNVR+  I+GPVV+LELEGACG+CPSSTMTMKMGLERRL + IPEIS+VVQ +P+ PD++
Sbjct:   26 GNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGLERRLKEAIPEISDVVQYLPDTPDMD 85          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: A0A7S1H4I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4I0_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.040e-24
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDL 59
            GNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER+L ++IPEI EVVQS+P GP+L
Sbjct:   50 GNVAISEIDGPVVRLELQGACGTCPSSTQTMKMGLERKLREKIPEIQEVVQSMPEGPEL 108          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: W7TNI1_9STRA (Nifu like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNI1_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.330e-24
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDLN 60
            GNV V +IDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+
Sbjct:  112 GNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALS 171          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: K0SKZ0_THAOC (NifU domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKZ0_THAOC)

HSP 1 Score: 98.6 bits (244), Expect = 4.200e-24
Identity = 44/59 (74.58%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDL 59
            GNV + EIDGPVVRLEL+G CG+CPSST TMKMGLER+L++RIPEI EVVQ++P+ PDL
Sbjct:   95 GNVAISEIDGPVVRLELQGECGTCPSSTQTMKMGLERKLMERIPEIQEVVQALPDSPDL 153          
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Match: B8BR62_THAPS (NifU like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR62_THAPS)

HSP 1 Score: 98.6 bits (244), Expect = 5.200e-24
Identity = 43/60 (71.67%), Postives = 54/60 (90.00%), Query Frame = 0
Query:    1 GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPDLN 60
            GNV + EIDGP+V+LEL+GACG+CPSST TMKMGLER+L +RIPEI EV+Q++P+ PDLN
Sbjct:  105 GNVAISEIDGPIVKLELQGACGTCPSSTQTMKMGLERKLRERIPEIQEVIQALPDTPDLN 164          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14115.3069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL7_9PHAE2.930e-3196.61NifU domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z016_9STRA2.290e-3088.33NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9U202_9STRA4.900e-2678.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1D6Z8_CYCTE1.900e-2577.97Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A4D9D2Y8_9STRA8.840e-2578.33NifU domain-containing protein n=1 Tax=Nannochloro... [more]
F0Y565_AURAN9.790e-2573.33NifU domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S1H4I0_9STRA1.040e-2476.27Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
W7TNI1_9STRA2.330e-2476.67Nifu like protein n=1 Tax=Nannochloropsis gaditana... [more]
K0SKZ0_THAOC4.200e-2474.58NifU domain-containing protein n=1 Tax=Thalassiosi... [more]
B8BR62_THAPS5.200e-2471.67NifU like protein n=1 Tax=Thalassiosira pseudonana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 1..56
e-value: 3.7E-20
score: 73.5
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 1..53
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 1..50
e-value: 1.8E-17
score: 63.2
NoneNo IPR availablePANTHERPTHR11178:SF39NIFU-LIKE PROTEIN 2, CHLOROPLASTICcoord: 1..51
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 1..51
NoneNo IPR availablePRODOMPD002830coord: 1..51
e-value: 2.0E-16
score: 203.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14115contigL-elsbetiae_contig14115:4032..4211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14115.3069.1mRNA_L-elsbetiae_contig14115.3069.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14115 4032..4211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14115.3069.1 ID=prot_L-elsbetiae_contig14115.3069.1|Name=mRNA_L-elsbetiae_contig14115.3069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp
GNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVV
QSIPNGPDLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf
IPR001075NIF_FeS_clus_asmbl_NifU_C