mRNA_L-elsbetiae_contig1407.3040.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5K832_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K832_9PHAE) HSP 1 Score: 128 bits (322), Expect = 1.630e-30 Identity = 65/137 (47.45%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 80 KVICVDAGHLKGEWEGQMLLATFKDANNTLV-----------------------------HLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVGQ 403 +V+CVDAGHLKG+W G ML+AT KDA+ LV H+AT ICDKEN+DNYS+ Y +MK N M VLNS KT+++TD+HKSH PA+ HA N +W+WCLRH + L + GQ Sbjct: 64 QVLCVDAGHLKGDWNGMMLVATSKDADTKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALPEAPGQ 200
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5KNP1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP1_9PHAE) HSP 1 Score: 119 bits (299), Expect = 9.950e-29 Identity = 59/127 (46.46%), Postives = 81/127 (63.78%), Query Frame = 2 Query: 2 QHPDGTFKRYGFMLGRAAFACAESPLKVICVDAGHLKGEWEGQMLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGN 382 +HPDG+FKR ++ RAA A K + VD GH+KG W+G +L+A KD NN LV +A VICDKENS NY FL+ MKKN H+++ L S T+IY+D++ A+ A + I + C +HL N Sbjct: 65 RHPDGSFKRIAIVVNRAALVIARGLFKFLQVDGGHMKGTWKGMVLVAAGKDTNNNLVLVAFVICDKENSTNYEFLFSEMKKNVHLKAPLESPLTTIYSDENNGIKSAIEIEASDIIHRLCCKHLANN 191
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5LCT1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT1_9PHAE) HSP 1 Score: 120 bits (300), Expect = 4.670e-27 Identity = 64/129 (49.61%), Postives = 82/129 (63.57%), Query Frame = 2 Query: 14 GTFKRYGFMLGRAAFACAESPLKVICVDAGHLKGEWEGQMLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVG 400 G F+ MLGRAA A SP+KV+ +D GHLKGEW G ML T KDANN +H+ATVI KE++ Y L KKN M +L +KT+ +TDQHK AL A A ++CLRHL+ NLE+++G Sbjct: 170 GRFRSVFVMLGRAAHAAVRSPIKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVATVIGPKEDTSLYKTLLRNCKKNLKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLILNLEEKIG 298
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5L0I2_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I2_9PHAE) HSP 1 Score: 109 bits (272), Expect = 3.030e-25 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 131 MLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVGQ 403 ML+AT DA+N LVH+AT ICDKEN+DNYS+ Y +MK N M +LNS KT+++TD+ KSH P + HA N +W+WCLRH + L + GQ Sbjct: 2 MLVATGTDADNKLVHVATSICDKENTDNYSWFYRMMKNNVDMAEILNSPKTTLFTDKRKSHEPTITLHAPNTVWRWCLRHHIKALAEASGQ 92
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5KCW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW3_9PHAE) HSP 1 Score: 111 bits (277), Expect = 5.390e-25 Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 131 MLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVGQ 403 ML+AT DA+ LVH+AT ICDKEN+DNYS+ Y +MK N M VLNS KT+++TD+HKSH PA+ HA N +W+WCLRH + L + GQ Sbjct: 2 MLVATGTDADTKLVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALPEAPGQ 92
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5JAG6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG6_9PHAE) HSP 1 Score: 113 bits (283), Expect = 7.360e-25 Identity = 62/131 (47.33%), Postives = 83/131 (63.36%), Query Frame = 2 Query: 17 TFKRYGFMLGRAAFACAESPLKVICVDAGHLKGEWEGQMLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVGQVR 409 +F+R MLGRAA A SP+KV+ D GHLKGEW G +L T KDANN ++H+ATVI KE++ Y L KKN M +L +KT +TDQHK AL A A ++CLRH++ N+E+ +G V+ Sbjct: 148 SFRRVILMLGRAARAAVRSPMKVVGKDGGHLKGEWNGMVLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTIFFTDQHKGATCALRGEAPLAQHRYCLRHIILNIEK-IGSVQ 277
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5L490_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L490_9PHAE) HSP 1 Score: 113 bits (283), Expect = 4.190e-24 Identity = 61/129 (47.29%), Postives = 80/129 (62.02%), Query Frame = 2 Query: 14 GTFKRYGFMLGRAAFACAESPLKVICVDAGHLKGEWEGQMLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVG 400 G F+ ML RAA A SP+KV+ +D GHLKGEW G ML T KDANN +H+A VI KE++ Y+ L KKN M +L +KT+ +TDQHK AL A A + CLRHL+ N+E+++G Sbjct: 173 GRFRSVFVMLRRAAHAAVRSPMKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVAAVIGPKEDTSLYNTLLRNCKKNPKMRDLLEDSKTTFFTDQHKEATCALRGEAPLAQHRHCLRHLILNIEEKIG 301
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5K0L7_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L7_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.060e-23 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 131 MLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVGQV 406 ML+AT DA+N L+H+AT ICDKEN+DNYS+ Y +MK N+ M VLNS KT+++TD+H SH PA+ HA +W+WCLRH++ L + G + Sbjct: 2 MLVATGMDADNRLMHVATGICDKENADNYSWFYRMMKNNAEMAKVLNSPKTTLFTDKHLSHEPAIRVHASKPVWRWCLRHVIRRLPEAPGSI 93
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: D7G6Q0_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q0_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.770e-23 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 8 PDGTFKRYGFMLGRAAFACAESPLKVICVDAGHLKGEWEGQMLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGN 382 PD F R MLG+AA+ A S K++ +DAGHLKG W G M + D+NN ++H++TV+ DKEN+ NY FL +N HM+ +L+S + + Y D HK AL A W+ C+RH + N Sbjct: 136 PDNRFVRSFLMLGKAAYVAAHSVPKIVAMDAGHLKGSWHGVMYVLCMHDSNNKIIHVSTVLADKENATNYEFLLQQTCRNEHMQRLLSSGEVTFYIDGHKGSPAALRAVLPQAPWRACVRHFITN 260
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Match: A0A6H5KJU4_9PHAE (MULE domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU4_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.770e-23 Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 131 MLLATFKDANNTLVHLATVICDKENSDNYSFLYGLMKKNSHMESVLNSNKTSIYTDQHKSHAPALATHARNAIWKWCLRHLMGNLEQQVGQ 403 ML+AT DA+ LVH+AT ICDKEN+DNYS+ Y +MK + M VLNS KT+++TD+HKSH PA+ HA N +W+WCLRH + L + GQ Sbjct: 2 MLVATGTDADTKLVHVATSICDKENTDNYSWFYRMMKNDVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALPEAPGQ 92 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1407.3040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1407.3040.1 >prot_L-elsbetiae_contig1407.3040.1 ID=prot_L-elsbetiae_contig1407.3040.1|Name=mRNA_L-elsbetiae_contig1407.3040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp MLGRAAFACAESPLKVICVDAGHLKGEWEGQMLLATFKDANNTLVHLATVback to top mRNA from alignment at L-elsbetiae_contig1407:24575..26238+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1407.3040.1 ID=mRNA_L-elsbetiae_contig1407.3040.1|Name=mRNA_L-elsbetiae_contig1407.3040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1664bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:24575..26238+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1407:24575..26238+ >mRNA_L-elsbetiae_contig1407.3040.1 ID=mRNA_L-elsbetiae_contig1407.3040.1|Name=mRNA_L-elsbetiae_contig1407.3040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:24575..26238+ (Laminarionema elsbetiae ELsaHSoW15)back to top |