mRNA_L-elsbetiae_contig13761.2852.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 349 bits (896), Expect = 1.930e-114 Identity = 179/224 (79.91%), Postives = 193/224 (86.16%), Query Frame = 3 Query: 324 MKTPFCCAAAGLVAA---SQTAQASTPTLTAQQQITMFNPEDFAFSLGGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIESLPEAPAAARRQCLKTCGLDNGDDDLSY 986 MKT FC AA +VAA S TAQAS +TAQQQITMFNPEDF F+LGGPEPDA ++GFQ+R L Q+PAL+GQGI+MALVNLDAC INLPHIHPRATEM YVI GE LRVAFVEENGGEGAVVNDL QGDV FFPQGLIHY+QNL CEP TFLAALNN+DPGAVTITTRFFELPSEAIQASLNFEDPALQ LIESLP+APAAARRQCL+ CGL +G D SY Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQAS-GVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSY 223
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 338 bits (867), Expect = 5.670e-110 Identity = 171/223 (76.68%), Postives = 190/223 (85.20%), Query Frame = 3 Query: 324 MKTPFCCAAAGLVAAS-QTAQASTPTLTAQQQITMFNPEDFAFSLGGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIESLPEAPAAARRQCLKTCGLDNGDDDLSYD 989 MKT FC AA ++AA +A +T QQQIT++NPEDF FSLGGPEPDA ++GFQLR +NQLPAL+GQGISM LVNLD CAINLPHIHPRATEM+YVIKGEQLRVAFVEENGGEGAVVNDL QGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGA+TITTRFFELP EAIQAS+NFE+P LQ LIESLP+APAAAR+QCL+ C + + SYD Sbjct: 1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYD 223
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 172 bits (437), Expect = 3.500e-46 Identity = 98/212 (46.23%), Postives = 129/212 (60.85%), Query Frame = 3 Query: 330 TPFCCAAAGLVAASQTAQASTPTLTAQQQITMFNPEDFAFSL-GGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFE-DPALQALIESLPEAPAAARRQCLKTCGL 959 T F A + +S T++ + T Q++ FN EDF L P+ G L +NL +PAL QG++M L+NL+ C NLPH+HPRA+E +YVI+G ++V F+EENG + +VNDL QG F PQG IHYQ NL CE A +AA NNEDPG +TI +FF+LP AI ASL DP ++AL SLP PA +CL+ CG Sbjct: 13 TSFLSAQSASPPSSTTSEPFDYSKTEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGN-VQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 155 bits (393), Expect = 4.150e-39 Identity = 80/175 (45.71%), Postives = 109/175 (62.29%), Query Frame = 3 Query: 441 FAFSLGGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIESLPEAPAAA--RRQCLKTCGL 959 F F+ E D + G + G +++Q PAL G G+S LV+L C+IN PH+HPRATE++Y+IKG ++ V F EENGG V ND+ +GD AFFP LIH+Q N CEPA F+A LN++D G TI FF LP + + +L ++ + L E LP PA R +C + CGL Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC) HSP 1 Score: 145 bits (366), Expect = 3.850e-36 Identity = 78/180 (43.33%), Postives = 104/180 (57.78%), Query Frame = 3 Query: 426 FNPEDFAFSLGGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIESLPEAPAAA--RRQCLKTCGL 959 F DF F + + G +RG Q PAL G G S + ++ C+IN PH+HPRATEMLY+ KG +L V F EENGG V ND+ +G+ AFFP LIH+Q N CEPA F+ LN++D G TI F LP++ + +LN ++ + L + LP PA R QC + CGL Sbjct: 69 FGNSDFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKG-RLIVGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 146 bits (369), Expect = 4.380e-36 Identity = 79/183 (43.17%), Postives = 114/183 (62.30%), Query Frame = 3 Query: 426 FNPEDFAFSLGGPEP---DASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIE-SLPEAPAAARRQCLKTCGLD 962 F+ EDF F D+ G ++ VNL + P ++ G+S + ++ C INLPH+HPRATE LY+I+G Q+ + FV + ++NDL + V FFP+G +HYQQN++CE A F++ L+NEDPG + +++ LP EA+ A+ N ED AL A + LPE PA AR +CL CGLD Sbjct: 105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEG-QVTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFN-EDQALIAQLRLGLPEGPARARSECLARCGLD 283
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A0G4FMH1_VITBC (Cupin type-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMH1_VITBC) HSP 1 Score: 145 bits (367), Expect = 4.740e-36 Identity = 75/192 (39.06%), Postives = 110/192 (57.29%), Query Frame = 3 Query: 381 QASTPTLTAQQQITMFNPEDFAFSLGGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIESLPEAPAAARRQCLKTCG 956 QA +P TA + + F EDF F+L + + G +LR + +P+L G G+S AL L C +N +HPRATE+ YVI +L V FVEENGG + N L G ++F P+GL+H+ N CE A FL+ N+EDPG +TI F++ S ++QA+ N + + + S+P +P +CL CG Sbjct: 26 QAYSPGQTALKFRSQFKTEDFVFNLAAAKAGDAGKGGELRVAAVAAMPSLAGNGVSQALYRLYPCGMNSVQMHPRATELFYVINATELHVGFVEENGGR-TIENVLKTGQLSFVPKGLLHWHYNAGCEDAIFLSTFNHEDPGVLTIVNALFDINSTSLQAAFNVDADQIADIKSSIPASPVPGIAECLAKCG 216
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.620e-35 Identity = 75/100 (75.00%), Postives = 84/100 (84.00%), Query Frame = 3 Query: 324 MKTPFCCAAAGLVAA---SQTAQASTPTLTAQQQITMFNPEDFAFSLGGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATE 614 MKT FC AA ++AA S T QAS +TAQQQIT+FNPEDF FSLGGPEPDA ++GFQ+R VN+NQLPAL+GQGISMALVNLD CAINLPHIHPRATE Sbjct: 1 MKT-FCAAAGFVIAAGLMSSTVQAS-GVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A0G4EA80_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA80_VITBC) HSP 1 Score: 144 bits (362), Expect = 2.490e-35 Identity = 74/190 (38.95%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 393 PTLTAQQQITMFNPEDFAFSLGGPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIESLPEAPAAARRQCLKTCGLD 962 P TA + + F F F L P + G +LR ++ +P+L G G+S L L C +N +HPRA+E+ YVI +L V FVEENGG V N L G ++F P+GL+H+ N CE A FL+ N+EDPG VTI F++ + ++QA+LN + + L S+P +P +CL+ CGL+ Sbjct: 31 PGQTALKFRSQFGSSQFVFDLARMSPVDAGKGGELRKADVGSMPSLAGNGVSQVLYRLYPCGMNSVQMHPRASELFYVINATELVVGFVEENGGR-TVENTLKTGQLSFVPKGLMHWHYNAGCEDAVFLSTFNHEDPGVVTIVNALFDINATSLQAALNVDRALVADLKTSVPPSPVPGIAECLRRCGLE 219
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 140 bits (353), Expect = 8.610e-35 Identity = 74/191 (38.74%), Postives = 108/191 (56.54%), Query Frame = 3 Query: 399 LTAQQQITMFNPEDFAFSLG----GPEPDASINGFQLRGVNLNQLPALEGQGISMALVNLDACAINLPHIHPRATEMLYVIKGEQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAVTITTRFFELPSEAIQASLNFEDPALQALIESLPEAPAAARRQCLKTCGL 959 ++A + + F+ EDF F G D+ NG + N+N P ++ ++ + C INLPH+HPR TE Y+I+GE L V FV E+G V+ND+ FFPQGL+HYQQN+ CEPA F++ L++ DPG + I LP EAI A+ + ++ + + LP+ PA R +CL CGL Sbjct: 13 VSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGE-LTVGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13761.2852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13761.2852.1 >prot_L-elsbetiae_contig13761.2852.1 ID=prot_L-elsbetiae_contig13761.2852.1|Name=mRNA_L-elsbetiae_contig13761.2852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=234bp MKTPFCCAAAGLVAASQTAQASTPTLTAQQQITMFNPEDFAFSLGGPEPDback to top mRNA from alignment at L-elsbetiae_contig13761:1419..4171- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13761.2852.1 ID=mRNA_L-elsbetiae_contig13761.2852.1|Name=mRNA_L-elsbetiae_contig13761.2852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2753bp|location=Sequence derived from alignment at L-elsbetiae_contig13761:1419..4171- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13761:1419..4171- >mRNA_L-elsbetiae_contig13761.2852.1 ID=mRNA_L-elsbetiae_contig13761.2852.1|Name=mRNA_L-elsbetiae_contig13761.2852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1404bp|location=Sequence derived from alignment at L-elsbetiae_contig13761:1419..4171- (Laminarionema elsbetiae ELsaHSoW15)back to top |