prot_L-elsbetiae_contig13760.2851.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13760.2851.1
Unique Nameprot_L-elsbetiae_contig13760.2851.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length85
Homology
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BLAST of mRNA_L-elsbetiae_contig13760.2851.1 vs. uniprot
Match: A0A6H5KWB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWB1_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.630e-14
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:   18 AISPSCQTLCASLELACNCLMTSSRAGXXXXXXXXXASYGKGEAWLKSVFALLEAEGQPESEGKTSQG 85
            A+SP+C TLCAS++LACNCLM   RA           + G GEAWL++VFALL+A+GQPESEG+   G
Sbjct:  826 AVSPACLTLCASIKLACNCLMAPGRA-----TDVSGGAEGTGEAWLRTVFALLKADGQPESEGEREMG 888
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BLAST of mRNA_L-elsbetiae_contig13760.2851.1 vs. uniprot
Match: D7FVV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV7_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 6.010e-13
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0 
Query:   18 AISPSCQTLCASLELACNCLMTSSRAGXXXXXXXXXASYGKGEAWLKSVFALLEAEGQPESEGKTSQG 85
            A+SP+C TLCAS++LACNCLM   RA           +  +GEAWL +VFALL+A+GQPES+G+   G
Sbjct:  964 AVSPACLTLCASIKLACNCLMAPGRA-----TDVSGGAEDRGEAWLSTVFALLKADGQPESDGEREMG 1026
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13760.2851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWB1_9PHAE3.630e-1455.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVV7_ECTSI6.010e-1352.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13760contigL-elsbetiae_contig13760:3401..3655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13760.2851.1mRNA_L-elsbetiae_contig13760.2851.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13760 3401..3655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13760.2851.1 ID=prot_L-elsbetiae_contig13760.2851.1|Name=mRNA_L-elsbetiae_contig13760.2851.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
GVGGGGGGRKKTAAAGGAISPSCQTLCASLELACNCLMTSSRAGAGGGGG
GGGASYGKGEAWLKSVFALLEAEGQPESEGKTSQG
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