mRNA_L-elsbetiae_contig1375.2843.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A383VBQ5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VBQ5_TETOB) HSP 1 Score: 143 bits (360), Expect = 2.310e-40 Identity = 76/132 (57.58%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 16 IYHLVQEAKWKD--AGAEGYLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKSEVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGL 405 +YHLVQ+ W+ A A+ Y PPTY ADGFIH TKE LLL VANHFYT V G F+ L ID+ L S+V FEAAAPVGD+P K QQFPH+YG ID AAV AEL V+R++DG FL+I GL Sbjct: 13 LYHLVQQEVWQQCKAAAQPYFPPTYGADGFIHLTKEPQLLLGVANHFYTTVPGTFLVLAIDSTKLSSKVVFEAAAPVGDQPPLEKQ-----------QQFPHLYGTIDFAAVSAELPVERAADGTFLAIVGL 133
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: D7FTN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN0_ECTSI) HSP 1 Score: 138 bits (348), Expect = 6.050e-39 Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 Query: 1 MGDSYIYHLVQEAKWKDAGAEGYLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKSEVRFE 225 MG+ YIYHLVQ A+WKDAG +GYLPPTY ADGFIHATKE LLLPVANHFYTDV G+FICLRIDT +LKSEVRFE Sbjct: 1 MGEKYIYHLVQGARWKDAGGDGYLPPTYEADGFIHATKEAGLLLPVANHFYTDVPGSFICLRIDTTVLKSEVRFE 75
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A835YYL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL7_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.050e-38 Identity = 74/132 (56.06%), Postives = 88/132 (66.67%), Query Frame = 1 Query: 13 YIYHLVQEAKWKDAGAEGYLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKSEVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSD-GQFLSIEGL 405 +IYHLVQ+ W+ YLPPTYA DGFIHAT E LL VANHFY DV FICL+IDT L SEV++EAAAPVGDK AH+ + FPHI+GPI++ AV AEL V R+ D G FL I+G+ Sbjct: 8 HIYHLVQKPLWEATRGSEYLPPTYAHDGFIHATAEADQLLGVANHFYKDVKDPFICLQIDTAKLTSEVKYEAAAPVGDKVAHAST-----------RLFPHIFGPINADAVSAELPVVRAEDDGTFLEIQGV 128
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A7S1NLR5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NLR5_9EUGL) HSP 1 Score: 127 bits (320), Expect = 2.470e-34 Identity = 69/132 (52.27%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 16 IYHLVQEAKWKDAGAEG--YLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKSEVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGL 405 +YHLV + +W+ A G Y PPTY DGFIH TK LL VANHFY DV G I + ID+ L+SEV+FE AAPVGDK + A+ + FPH+YG ID AVV EL V R+ DG FL+IEGL Sbjct: 13 LYHLVPKERWEADRACGRPYFPPTYNQDGFIHLTKVADRLLIVANHFYKDVPGEHIVVGIDSTKLQSEVKFEPAAPVGDKETYDSAKV---------ELFPHLYGTIDYEAVVQELRVSRAPDGAFLAIEGL 135
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A7S2TE52_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TE52_9EUKA) HSP 1 Score: 112 bits (280), Expect = 2.120e-28 Identity = 60/130 (46.15%), Postives = 78/130 (60.00%), Query Frame = 1 Query: 16 IYHLVQEAKWKDAGAEGYLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKSEVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGL 405 IYH++++ +W + Y P TY DGF HAT E L+ +AN FY + ++C+ IDTN LK+EV++EA APVG+K GDES FPHIYGPI A VV + R G+FLSIEGL Sbjct: 8 IYHMLEKKEWAACEGKEYYPKTYKQDGFTHATGEAKFLIKIANMFYKESKEEWVCIAIDTNKLKAEVKWEAPAPVGNK-------KGDESEPK--VLFPHIYGPILHAEVVKVYPIVRCDKGEFLSIEGL 128
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A2E9NVU5_9GAMM (DUF952 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9NVU5_9GAMM) HSP 1 Score: 111 bits (278), Expect = 1.380e-27 Identity = 59/139 (42.45%), Postives = 80/139 (57.55%), Query Frame = 1 Query: 13 YIYHLVQEAKWKDAGAEG--YLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKS---EVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGLCRE 414 +++HLVQ++ W+DA Y PPTY DGF HAT L + NHFY DV G+++CL++ L + FE APVGDK A+ + G+D + FPHI G I ++V+ L V R DG+FLSIEG E Sbjct: 38 FVFHLVQKSLWEDAVENNVTYFPPTYHQDGFTHATANAIYLTTIGNHFYQDVMGDWLCLKMSLASLSRTGVDTIFEGTAPVGDKEANFE--------GSDSELFPHILGGIHPSSVLETLVVNRDHDGRFLSIEGFIEE 168
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A2E0N657_9GAMM (DUF952 domain-containing protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0N657_9GAMM) HSP 1 Score: 111 bits (277), Expect = 1.900e-27 Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 13 YIYHLVQEAKWKDAGAEG---YLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKS---EVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGLCREP 417 Y++HL+Q W+ AE Y PPTY DGF H T LL VANHFY +V G+++CLR+ L+ + FE APVGDKPA+ + G+D + +PHI G I +AV+A V R+ DG+F+ IEG+ P Sbjct: 37 YVFHLIQAELWQATLAEEDGIYYPPTYDVDGFTHGTANPAKLLVVANHFYPEVQGDWLCLRMTVESLQESGVKTIFEGTAPVGDKPANFE--------GSDSELYPHILGGISPSAVLAAHKVVRTQDGKFIQIEGVTDSP 169
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A520SLI5_9GAMM (DUF952 domain-containing protein n=1 Tax=OM182 bacterium TaxID=2510334 RepID=A0A520SLI5_9GAMM) HSP 1 Score: 110 bits (274), Expect = 2.380e-27 Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = 1 Query: 13 YIYHLVQEAKWKDAGAEG---YLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKS---EVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGLCREP 417 Y++HL+Q W+ A+ Y PPTY DGF H T LL VANHFY +V GN++CLR+ L+ E FE APVGDKPA + G+DG+ +PHI G I +AV+ V R++DG+F++I + P Sbjct: 8 YVFHLIQAELWQATLAQDDGVYYPPTYDVDGFTHGTANPEKLLVVANHFYPEVPGNWLCLRMTVESLQESGVETIFEGTAPVGDKPADFE--------GSDGELYPHILGGISPSAVLGTHKVVRTADGKFVAIADVTDSP 140
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A7S0H530_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H530_9EUKA) HSP 1 Score: 109 bits (272), Expect = 3.680e-27 Identity = 62/132 (46.97%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 16 IYHLVQEAKWKDAGAEG-YLPPTYAADG-FIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKSEVRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGL 405 IYHLV+E WK E Y PPT+ DG F HAT + LL V NHFY D +ICL I LKS +++E AA VG+ AH+K FPHIYGPI + V V RS DG+F+SIEGL Sbjct: 10 IYHLVEEPHWKPVSEEKPYFPPTFKQDGGFTHATADPKALLTVGNHFYKDSKECWICLEIVVKNLKSNLKWEGAASVGNTKAHTKENV----------VFPHIYGPIHPSEVGKVYKVSRSKDGEFISIEGL 131
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Match: A0A2D6V7Y3_9GAMM (DUF952 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D6V7Y3_9GAMM) HSP 1 Score: 108 bits (270), Expect = 2.690e-26 Identity = 60/137 (43.80%), Postives = 79/137 (57.66%), Query Frame = 1 Query: 13 YIYHLVQEAKWKDAGA---EGYLPPTYAADGFIHATKEGHLLLPVANHFYTDVAGNFICLRIDTNILKSE---VRFEAAAPVGDKPAHSKAETGDESAGADGQQFPHIYGPIDSAAVVAELAVKRSSDGQFLSIEGL 405 Y++HLVQ+ W++A + + Y PPTY DGF H T LL VANHFY DV G+++CLR+ + LK FE APVGDKPA + G D + +PHI G I AV+ V R+ DG F +IEG+ Sbjct: 36 YVFHLVQKNLWEEASSSEDQVYYPPTYKQDGFTHGTANPEKLLTVANHFYKDVPGDWLCLRMTVDSLKISGVVTVFEGTAPVGDKPA--------DFDGNDDELYPHILGGISPMAVIDTHKVFRAEDGVFTAIEGV 164 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1375.2843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1375.2843.1 >prot_L-elsbetiae_contig1375.2843.1 ID=prot_L-elsbetiae_contig1375.2843.1|Name=mRNA_L-elsbetiae_contig1375.2843.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp MGDSYIYHLVQEAKWKDAGAEGYLPPTYAADGFIHATKEGHLLLPVANHFback to top mRNA from alignment at L-elsbetiae_contig1375:789..5408- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1375.2843.1 ID=mRNA_L-elsbetiae_contig1375.2843.1|Name=mRNA_L-elsbetiae_contig1375.2843.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4620bp|location=Sequence derived from alignment at L-elsbetiae_contig1375:789..5408- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1375:789..5408- >mRNA_L-elsbetiae_contig1375.2843.1 ID=mRNA_L-elsbetiae_contig1375.2843.1|Name=mRNA_L-elsbetiae_contig1375.2843.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig1375:789..5408- (Laminarionema elsbetiae ELsaHSoW15)back to top |