mRNA_L-elsbetiae_contig13716.2830.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI) HSP 1 Score: 275 bits (703), Expect = 9.550e-82 Identity = 137/194 (70.62%), Postives = 160/194 (82.47%), Query Frame = 1 Query: 55 GSAATQMQPGDTMARLVSLLLKGEAGFVEKWFKVPSSSSSWAGAAELLAPPDTFLWLLGAIGAAGGGSSATPGEPPTQPVKVLPRQATGVIEALRAHVRAVPGRLYVDGNVTGLSPEEEAERRQQNSDADADGALKLLPISIPTEWKVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQPKVKKA 636 G A T + P D MARLVS+LLKGE GFVE+WFKV SS S GAAELLAPPD+F WLLGA+G GG G+PP PV +P+Q +G ++A +HVR+VPGRLYVDG VTGLSPE+EA++R Q+ ++DADGALKLLP+ IPTEW+VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDAL+PKV +A Sbjct: 1451 GGAETHLDPPDAMARLVSVLLKGEGGFVERWFKVSSSCSG--GAAELLAPPDSFSWLLGALGDGGGAPPPFAGDPPPTPVSAVPKQVSGGVDAFLSHVRSVPGRLYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRA 1642
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: G4Z438_PHYSP (PH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z438_PHYSP) HSP 1 Score: 71.2 bits (173), Expect = 9.290e-11 Identity = 42/96 (43.75%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 355 VPGRLYVDGNVTGLSPEEEAERRQQNSDAD------ADGALKLLPISIPTEWK-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 VPG V G GLS +EEA Q A A+ A + S P + VVQ+ACG+RH+AL+T + T GHGE GRLGHG++ED +P Sbjct: 1691 VPGLALVWGKPLGLSLDEEAHISQGGRSATLCLRPTAENASPIRMASFPRPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEP 1786
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: A0A0P1AQZ9_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQZ9_PLAHL) HSP 1 Score: 70.5 bits (171), Expect = 1.690e-10 Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 355 VPGRLYVDGNVTGLSPEEEAE-RRQQNSDADA----DGALKLLPISIPTEWK-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQPK 624 VPG + GN GLS ++EA+ R+ + + + A + +S P + VVQ+ACG+RH+AL+T L+ T GHGE GRLGHG EE PK Sbjct: 1177 VPGFALMWGNPLGLSLDDEAQISREPHMKSSLRPRPETAASICTLSFPPSIRCVVQIACGYRHTALITDDRLLYTFGHGECGRLGHGTEESCHDPK 1272
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: A0A425DLG9_9STRA (Uncharacterized protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DLG9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.030e-10 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 352 AVPGRLYVDGNVTGLSPEEEAERRQQNSDADA-------------DGALKLLPISIPTEWKVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 A G +V+GNV G+S + E QN D L LL +P + V V+CG+RH+A+VT + TLG+GE GRLGHGDE AL P Sbjct: 438 ATNGLAFVEGNVMGMSLDVEQRNMLQNQQRDPALHAFTSLSCSMRSTDLNLLQFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHP 540
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: W4GXB4_9STRA (eIF3_p135 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXB4_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.220e-10 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 352 AVPGRLYVDGNVTGLSPEEEAERRQQNSDADA-------------DGALKLLPISIPTEWKVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 A G +V+GNV G+S + E QN D L LL +P + V V+CG+RH+A+VT + TLG+GE GRLGHGDE AL P Sbjct: 997 ATNGLAFVEGNVMGMSLDVEQRNMLQNQQRDPALHAFTSLSCSMRSTDLNLLQFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHP 1099
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: A0A3R7C2L6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7C2L6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.900e-10 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 352 AVPGRLYVDGNVTGLSPEEEAERRQQNSDADA-------------DGALKLLPISIPTEWKVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 A G +V+GNV G+S + E QN D L LL +P + V V+CG+RH+A+VT + TLG+GE GRLGHGDE AL P Sbjct: 766 ATNGLAFVEGNVMGMSLDVEQRNMLQNQQRDPALHAFTSLSCSMRSTDLNLLRFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHP 868
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: A0A0W8DL90_PHYNI (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DL90_PHYNI) HSP 1 Score: 69.7 bits (169), Expect = 2.990e-10 Identity = 41/94 (43.62%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 355 VPGRLYVDGNVTGLSPEEEAERRQQNSDAD----ADGALKLLPISIPTEWK-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 VPG GN GLS +EEA S + + + IS P + VVQ+ACG+RH+AL+T + T GHGE GRLGHG+EED P Sbjct: 864 VPGLALAWGNPLGLSLDEEARISHGASKMSLRLTTENSSSVRMISFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNEEDCTDP 957
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: W2Q1R4_PHYPN (PH domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2Q1R4_PHYPN) HSP 1 Score: 69.7 bits (169), Expect = 3.060e-10 Identity = 41/94 (43.62%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 355 VPGRLYVDGNVTGLSPEEEAERRQQNSDAD----ADGALKLLPISIPTEWK-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 VPG GN GLS +EEA S + + + IS P + VVQ+ACG+RH+AL+T + T GHGE GRLGHG+EED P Sbjct: 1234 VPGLALAWGNPLGLSLDEEARISHGASKMSLRLTTENSSSVRMISFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNEEDCTDP 1327
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: A0A3R6ZVZ9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZVZ9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 3.060e-10 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 352 AVPGRLYVDGNVTGLSPEEEAERRQQNSDADA-------------DGALKLLPISIPTEWKVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 A G +V+GNV G+S + E QN D L LL +P + V V+CG+RH+A+VT + TLG+GE GRLGHGDE AL P Sbjct: 1283 ATNGLAFVEGNVMGMSLDVEQRNMLQNQQRDPALHAFTSLSCSMRSTDLNLLRFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHP 1385
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Match: A0A0W8D4U4_PHYNI (Mitogen-activated protein kinase kinase 6 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D4U4_PHYNI) HSP 1 Score: 69.3 bits (168), Expect = 4.140e-10 Identity = 40/94 (42.55%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 355 VPGRLYVDGNVTGLSPEEEAERRQQNSDAD----ADGALKLLPISIPTEWK-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALQP 621 VPG GN GLS +EEA S + + + +S P + VVQ+ACG+RH+AL+T + T GHGE GRLGHG+EED P Sbjct: 1216 VPGLALAWGNPLGLSLDEEARISHGASKMSLRLTTENSSSVRMVSFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNEEDCTDP 1309 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13716.2830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13716.2830.1 >prot_L-elsbetiae_contig13716.2830.1 ID=prot_L-elsbetiae_contig13716.2830.1|Name=mRNA_L-elsbetiae_contig13716.2830.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=213bp KKNAGRRLEGTAAAAEASGSAATQMQPGDTMARLVSLLLKGEAGFVEKWFback to top mRNA from alignment at L-elsbetiae_contig13716:1419..4811+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13716.2830.1 ID=mRNA_L-elsbetiae_contig13716.2830.1|Name=mRNA_L-elsbetiae_contig13716.2830.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3393bp|location=Sequence derived from alignment at L-elsbetiae_contig13716:1419..4811+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13716:1419..4811+ >mRNA_L-elsbetiae_contig13716.2830.1 ID=mRNA_L-elsbetiae_contig13716.2830.1|Name=mRNA_L-elsbetiae_contig13716.2830.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1278bp|location=Sequence derived from alignment at L-elsbetiae_contig13716:1419..4811+ (Laminarionema elsbetiae ELsaHSoW15)back to top |