mRNA_L-elsbetiae_contig136.2737.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig136.2737.1
Unique NamemRNA_L-elsbetiae_contig136.2737.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: D8LFG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG5_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 1.020e-148
Identity = 346/469 (73.77%), Postives = 370/469 (78.89%), Query Frame = 3 
Query:   45 MSGF-DGDGHPEEKTAKAGAEDMQXXXXXXXXXXXXXXXXXXXXXXGEFIEAGDIAAEFEVGNNDDDGDDGMGEEGEEEAGATEEVE----------DMAGATFTGHSDAVYCVAVNPKNPSQFISGGGDDKGFLWAVKDDGTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHPDPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHCDAGAGSVEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHPAAVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRLVDPHLPSSPXXXXXXXXXXXXXXXXXXXXXNSSKVFRWPSPEAEAAA 1418
            MSGF D  G  EEK+   G +DM                        EF+EAGDIAAEFE+G+         GEE                      DMA ATFTGHSDAVYCVAV+PKNPSQF++GGGDDKGFLW ++DDG V GSCELGGH DTVS VGFS DGSL ATGC+GGLLKVWEAATG +KHVLEG ED+ECLAWHTL XXXXXXXXXXXXXXXXXXXXXX   FAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FHVG+VTCLASHP+  QAA++MSGGEDG+AR+MHVQNKRVVGTMVHCDAGAGSVEAVGFCATH PWVATGGTDG +KVWD VSGTCRHTC+HPAAVTRLEWHPAA      XXXXXXXXXXXXXXXXTSLFTGHTDMILDMRLVDP   ++  XXXXXXXXXXXXXXXXX   N+SKVFRWPSP AEAAA
Sbjct:    1 MSGFEDNGGSAEEKSMGQGGDDMDQEDQEVAAGVAAGGDNGDD----EFMEAGDIAAEFEIGD---------GEEXXXXXXXXXXXXXXXXXXXXXXDMAVATFTGHSDAVYCVAVHPKNPSQFVTGGGDDKGFLWTIQDDGAVGGSCELGGHPDTVSAVGFSLDGSLVATGCFGGLLKVWEAATGGLKHVLEGQEDIECLAWHTLXXXXXXXXXXXXXXXXXXXXXXXMQVFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHVGSVTCLASHPNHAQAALVMSGGEDGTARVMHVQNKRVVGTMVHCDAGAGSVEAVGFCATH-PWVATGGTDGGMKVWDTVSGTCRHTCLHPAAVTRLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRLVDPRSQAAGAXXXXXXXXXXXXXXXXXSDDNASKVFRWPSPGAEAAA 455
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: A0A835YY67_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY67_9STRA)

HSP 1 Score: 269 bits (687), Expect = 3.760e-78
Identity = 196/369 (53.12%), Postives = 232/369 (62.87%), Query Frame = 3 
Query:  306 MAGATFTGHSDAVYCVAVNPKNPSQFISGGGDDKGFLWAVKDDGTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHPDPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHC--------------------------DAGAG-SVEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHPAAV------------------TRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRL 1277
             + ATF+GH D VYC+AVNP  P+QF++GGGDD+GFLW +  DG V+   ELGGHTDTV +V FS DG+LAATG Y G +++W++ATG +K  LEGP+DVE   WH   XXXXXXXXXXXXXXXXXXXX     FAGHE +V+         XXXXXXXXXXXXXXXXXXXXXXXXXXXX FH G VTCLA HPDP+QA +++SG EDG+AR++H Q KRV+ T VH                           +A A  SVEAVGFCA   PW ATGG DG+LK+WD  SG CRHTC HPA +                  TRL WHP  P ++TA                   +TGH DM LD+ L
Sbjct:   81 QSSATFSGHGDVVYCIAVNPAKPTQFLTGGGDDRGFLWTLSADGDVSQCHELGGHTDTVGSVAFSCDGALAATGGYDGRVQIWDSATGALKFCLEGPDDVEWATWHPKXXXXXXXXXXXXXXXXXXXXXECMRVFAGHEGRVNAGAFTSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHEGPVTCLAVHPDPEQAHLVLSGSEDGTARLVHAQTKRVLATFVHSANVAAAXXXXXXXXXXXXXXXXXDAMEAEASFSVEAVGFCAVR-PWCATGGADGNLKIWDLQSGLCRHTCRHPAGIXXXXXXXXXXXXXXXXXXTRLRWHPRLPTLYTACADGALRAWDALSGACARTYTGHRDMALDLDL 448
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: A0A7S2SSY9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSY9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.640e-40
Identity = 147/389 (37.79%), Postives = 185/389 (47.56%), Query Frame = 3 
Query:  285 ATEEVEDMAGATFTGHSDAVYCVAVNPKNPSQF--ISGGGDDKGFLWAVKD-------------------------------DGTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHPDPDQAA------------MIMSGGEDGSARMMHVQNKRVVGTMVHC-----------DAGAG-SVEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHP--AAVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILDMR 1274
            A E  +D++  T  GHSD+VY VA    +  +   ++GGGDD   LW++                                 + T   + E  GH D+V +VGFS DGSL AT    G++KVW +  G +   LEGP DVE L WH  G                         FAGHE  V+           XXXXXXXXXXXXXXXXXXXXXXXXXX FH GAVTCLA+HP  D               +IMSG EDG A+++H+ +KR+V +  H            +AG G SVE V  C    PW ATGG DG  KVWD  SG  RH+   P   AV +L WHP+  ++ TA                    TGH +M+LD++
Sbjct:   70 AQEVFDDLSLVTLDGHSDSVYSVAGCRMDGGELRVVTGGGDDVAMLWSISPSLGDAPPXXXXXXXXXXXXXXXAPTQAPRQLEATKLATLE--GHADSVVSVGFSHDGSLFATASMDGVIKVWSSDDGKLVRTLEGPGDVEWLQWHGKGNVLLAGSSDGTVWMWLASSGACMQVFAGHEGAVTSGIFTPDGRTVXXXXXXXXXXXXXXXXXXXXXXXXXXGFHEGAVTCLAAHPKWDSGTSAADGSSDSSNHLIMSGSEDGYAKLLHLGSKRIVASFAHSPGISQEGTVDEEAGEGFSVEDVDLCGVQ-PWAATGGVDGFCKVWDISSGRLRHSLQIPEGVAVVKLRWHPSQALIVTASADGVVRLWDARQGLMAKELTGHRNMLLDLQ 455
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: A0A7S2MQ02_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQ02_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.950e-40
Identity = 180/370 (48.65%), Postives = 219/370 (59.19%), Query Frame = 3 
Query:  297 VEDMAGATFTG-HSDAVYCVA----------VNPKNPS-------QFISGGGDDKGFLWAV----KDDGTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHP---DPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHC----DAGAG--------SVEAVGFCATH-HPWVATGGTDGSLKVWDAVSGTCRHTCVHPAAV-------TRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILDM 1271
            V DM+ AT  G H D++Y VA          V P  P        +  +GGGDD+G LW V    ++   VA    L GHTD+V  V FS D +L ATG   G++++W+AA+G ++  LEGP D+E L WH  G      XXXXXXXXXXXXXXXXXX  AGHE  V+         XXXXXXXXXXXXXXXXXXXXXXXXXXXX  H   VTC+A HP   + +   + ++G EDG+AR+M V  K+VVG   H     + G+         SVEAV FC T   PW+AT G DG++K+WD  +G  R TCV P  V       T+L W P  P     XXXXXXXXXXXXXXXX    TGH+DM+LDM
Sbjct:   71 VPDMSIATLAGMHEDSIYTVAHSRFIPAENTVAPGTPQPPPTGIFRVATGGGDDRGGLWEVALPSRETRLVA---RLEGHTDSVIAVAFSFDDALLATGGMDGIVRIWDAASGALQQSLEGPGDIEWLDWHVKGNVVLAGXXXXXXXXXXXXXXXXXXVLAGHEGGVTAGNFTPDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCHEAGVTCIAFHPNWIESESDRLALTGSEDGTARLMQVSAKKVVGCFAHSVPLTNEGSAQQQAVEILSVEAVAFCRTKSQPWIATAGVDGTVKIWDMTNGALRETCVDPGKVGGEADPVTKLLWFPNIPXXXXXXXXXXXXXXXXXXXXXVEALTGHSDMVLDM 437
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: W7TIN2_9STRA (WD40 repeat containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIN2_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.620e-40
Identity = 175/399 (43.86%), Postives = 210/399 (52.63%), Query Frame = 3 
Query:  255 MGEEGEEEAGATEEVEDMAGATFTGHSDAVYCVAVNPKNPSQFISGGGDDKGFLW----AVKDDGTVAGSCELGG------HTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHPDPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHCD------AGAG-------------------------------------------SVEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHPA--AVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILD 1268
            +GEEGE  AG    V DMA  +F GH   +Y VA+NP++    ++GGGDD+ F W    A     T      LG       H ++V+ VG+S DGSLAATG Y G + VW+A T  +   LEGPEDVE L WH   XXXXXXXXXXXXXXXXXXXXXXXXX    E  V+        XXXXXXXXXXXXXXXXXXXXXXXXXXXX  FH G VT LASHP                AR++H   KRV+ +MVH +       G G                                           SVE VGF +  + W ATGG DG++K+WD  + +CRH CVHP    VT+L+WH + P+++TA                    TGH DMILD
Sbjct:   81 LGEEGE--AGLPTSVADMAVLSFRGHKGPIYAVAINPRDSRSMLTGGGDDRAFFWETTAAAPSVNTSTSMPGLGAVKESEDHGESVNAVGYSHDGSLAATGAYSGKVLVWDAKTRGLLQTLEGPEDVEWLQWHPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAVTVGMFTSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAFHEGPVTALASHPXXXXXXXXXX--XXXXARLLHAAGKRVLASMVHSEPTAVGNGGGGASVNGRGKEGGKSEGGVAPMEEDGTGPGTEEGVAGEEVHEGNYSVETVGFSSVLN-WCATGGMDGTMKIWDLGNFSCRHVCVHPGLPGVTKLQWHASLPLIYTAATDGVLRLWDARSGALLQAMTGHEDMILD 474
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: A0A7S3HSR6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSR6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.300e-39
Identity = 163/405 (40.25%), Postives = 204/405 (50.37%), Query Frame = 3 
Query:  303 DMAGATFTGHSDAVYCVAVNPKNPSQFISGGGDDKGFLW--AVKDD---------------------GTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHPDPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHC---------------------------------------------DAGAGS-----------VEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHPAAVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRLV 1280
            D++   F+ HSD+VYC AV+P +P   I+GGGDD  ++W  A + D                     G V  + +L GHTDTV++VGF+ +GSLA TG Y GL+K+W+  TG +   LEGPEDVE   WH  G  XXXXXXXXXXXXXXXXXXXXX  FAGH+  V+        XXXXXXXXXXXXXXXXXXXXXXXXXXX    H   VTCLAS      A  ++SG  DG+  +  +  KR + T +H                                              D G  S           VE VGF      WVA+GG D ++KVWD ++GT R TC+H  +V  L WH   P+V TA                    TGH D++  + +V
Sbjct:   51 DLSYVAFSAHSDSVYCAAVHPLSPGLVITGGGDDTAYIWKFAKQADTHMDTDESTGELAGVSSSFPRGEVISTIKLSGHTDTVTSVGFNFNGSLALTGAYDGLVKIWQVETGELVQTLEGPEDVEWAHWHNKGNAXXXXXXXXXXXXXXXXXXXXXHVFAGHDGAVTCGSFTRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXIADAHQADVTCLAS--GGADADFVLSGSADGTVHLYQLSGKRKLQTFLHSKQLDEDTANAAAAEAAAARREAREQAALATVREGDEMNEEDGDFDDEGYDSEGEEKHDAVLGVECVGFANGEFKWVASGGMDKTMKVWDTMTGTVRCTCLHGGSVVALVWHSTLPLVATAALDNVVRIWDARNGKLLQELTGHNDLVTSIDMV 453
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: UPI0014580C3A (angio-associated migratory cell protein-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014580C3A)

HSP 1 Score: 150 bits (378), Expect = 1.130e-35
Identity = 110/350 (31.43%), Postives = 153/350 (43.71%), Query Frame = 3 
Query:  237 DDGDDGMGEEGEEEAGATEEVEDMAGATFTGHSDAVYCVAVNPKNPSQFISGGGDDKGFLWAVKDDGTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHPDPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHCDA---GAGSVEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHPAAVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRL 1277
            D+ DD   EE E   G   +V+D A A F+ HSDAV+ V ++P      ++GG DDKG++W+V D  ++    E GGH D+V++VGFS DG  AAT    GL+KVW+  T +     E   D+E L WH L                          F GH                                            H   V C+  H D    +M+M+G  D +A++++    +V+ T   C++   G  SVEA GFC       ATG   G+L +WD  +   R +C H A V RL+W P AP+V+TA                 + +TGHTD ILD  L
Sbjct:   53 DEEDDEFDEESEAMGGG--QVKDDASAVFSSHSDAVFSVGIDPHEGKMVVTGGQDDKGYIWSVTDGESIM---ECGGHKDSVTSVGFSFDGMYAATADLSGLVKVWKVDTKSEVWSFEC-SDIEWLQWHLLAPVLLCGTVDGDVWMWKIPDGDCKT-FQGHGCTAGVGRILPDGKRLCVGYDDGAVKIWNMKTADVMKTISGRDGHTSTVVCMDCHHDN---SMVMTGSTDITAKVINSSTGKVLSTF-KCESIKEGDNSVEACGFCK-QQTLAATGTLQGTLCIWDMPTQIVRSSCQHEAGVVRLKWDPTAPLVYTACLDGVVRLWDGRNGQCVNQWTGHTDSILDFDL 390
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: R1F0A5_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F0A5_EMIHU)

HSP 1 Score: 149 bits (375), Expect = 1.790e-35
Identity = 103/323 (31.89%), Postives = 142/323 (43.96%), Query Frame = 3 
Query:  303 DMAGATFTGHSDAVYCVAVNPKNPSQFISGGGDDKGFLWAVKDDGTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGP-EDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVG-AVTCLASHPDPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHCDAGAGSVEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHPAAVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMIL 1265
            D++      H+ AV+ VAVNP  P  F +GGGDD   LW +  +  VA    L GHTD+VS+VGFSADGS  ATG   G ++VW AA G++  +LEGP + +  + WH  G                         F+ H + VS                                       H   AVTCLA HP     A+ + G E G+ ++ H ++ +++ ++    A   SVEA  FC    P  ATGG DG L +WD  +   RHTC+H A V    W   +P+VF+                  +  TGHTD +L
Sbjct:   52 DLSVQCLRAHTSAVFAVAVNPAQPHVFATGGGDDVAHLWRLGSEAPVA---ALRGHTDSVSSVGFSADGSYLATGGLDGAVRVW-AADGSLVVLLEGPTQGINWVCWHARGHVLLAGSEDATAWMWKVPEGAVMQIFSAHSASVSYGGFANGGRSVITASEDGTIRLWNPRAGTVEHCTHASPPHEPEAVTCLAPHPSQ---AVYLFGVESGAVKIAHAESGKLLASL---PAHEDSVEAASFCECM-PLAATGGMDGKLCIWDLNTYGLRHTCLHGAGVIEAVWRRGSPLVFSCTVSKEVRLWDARSGACLNTLTGHTDAVL 363
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: F0Y9Y4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Y4_AURAN)

HSP 1 Score: 146 bits (369), Expect = 2.280e-35
Identity = 119/324 (36.73%), Postives = 151/324 (46.60%), Query Frame = 3 
Query:  330 HSDAVYCVAVNPKNPSQFISGGGDDKGFLWAVKDDGTVAGSCELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHV------------GAVTCLASHP-DPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHCDAGAGSVEAVGFCATHHPWVATGGTDGSLKVWD--AVSGTCRHTCVHPAAVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTD 1256
            H DAVYC A  P   +  ++GGGDD+ FL      G  + S ELGGHTD+V+T GFS  G+ AATG Y G +K+W+A TG +   L+GP DVE L WH  G     XXXXXXXXXXXXXXXX    FAGHE  V                                                      GA+T L  HP DP+   ++ +  EDG+A ++H ++K++V  + H D  A +V  V F      WVATG  DG LKVWD   +    R + VH  AV  L W P A  + ++                     GHTD
Sbjct:    1 HGDAVYCCAFAPNGDA--LTGGGDDRAFLHFGAGSGAASRSVELGGHTDSVTTCGFSHTGTFAATGSYDGTVKLWDATTGNLARTLDGPGDVEWLKWHPKGDVVLCXXXXXXXXXXXXXXXXCMRVFAGHEGPVLCGAFTCDGKQIVTGSADGSVRVWAPKKGVCKHAWLPRGHGAPPGDRGMLLMSNGAITALDVHPSDPE---LVAAAAEDGTAVVLHCKSKKIVNVLEHADP-AYAVVCVAFSRDPDTWVATGSVDGFLKVWDFAKLPARPRVSLVHNTAVVALAWFPKAAKLVSSSADLSVKVWDARSGACERDLRGHTD 318
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Match: A0A210PG61_MIZYE (Angio-associated migratory cell protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PG61_MIZYE)

HSP 1 Score: 145 bits (365), Expect = 5.550e-34
Identity = 103/343 (30.03%), Postives = 146/343 (42.57%), Query Frame = 3 
Query:  264 EGEEEAGATEEVEDMAGATFTGHSDAVYCVAVNPKNPSQFISGGGDDKGFLWAVKDDGTVAGSC--ELGGHTDTVSTVGFSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGXXXXXXXXXXXXXXXXXXXXXXXXXFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGAVTCLASHPDPDQAAMIMSGGEDGSARMMHVQNKRVVGTMVHCDA---GAGSVEAVGFCATHHPWVATGGTDGSLKVWDAVSGTCRHTCVHPAAVTRLEWHPAAPVVFTAXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRL 1277
            E E EA    +V+D A   F+ H+DAV+ V ++P      ++GG DDK ++W+  D     G C  E GGH D+V++VGFS +G  AAT    GL+KVW+  T       E   D+E L WH L                          F GH                                            H   V C+  H D    +M+M+G  D ++++++    +V+ T   C++   G  SVEA GFC     W ATG   G+L +WD  +   R  C H A V RL+W P AP+V+TA                 + ++GHTD ILD+ L
Sbjct:   54 EDELEARGGSQVKDDASVVFSNHTDAVFSVGIDPHEGKMVVTGGQDDKAYIWSATD-----GECIMECGGHKDSVTSVGFSFNGVYAATADLSGLVKVWKVETKAEVWSFEC-SDIEWLQWHPLAPVLLSGTVDGDVWMWKIPDGDCKT-FQGHGCTAGVGRILPDGKRVCVGYDDGAIKVWNMKTADMMKTISGRDGHSSTVVCMDCHHDN---SMVMTGSTDVTSKVVNTSTGKVLSTF-KCESMKEGENSVEACGFCK-QQTWAATGTLQGTLCIWDLPTQIVRSNCQHEAGVVRLKWDPTAPLVYTACLDGVVRLWDGRNGQCVNQWSGHTDSILDLDL 384
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig136.2737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFG5_ECTSI1.020e-14873.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YY67_9STRA3.760e-7853.12WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2SSY9_9STRA1.640e-4037.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2MQ02_9STRA2.950e-4048.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TIN2_9STRA3.620e-4043.86WD40 repeat containing protein n=2 Tax=Monodopsida... [more]
A0A7S3HSR6_9STRA2.300e-3940.25Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI0014580C3A1.130e-3531.43angio-associated migratory cell protein-like n=1 T... [more]
R1F0A5_EMIHU1.790e-3531.89Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
F0Y9Y4_AURAN2.280e-3536.73Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A210PG61_MIZYE5.550e-3430.03Angio-associated migratory cell protein n=1 Tax=Mi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig136contigL-elsbetiae_contig136:13340..21534 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.8
Seed ortholog evalue1.2e-125
Seed eggNOG ortholog2880.D8LFG5
KEGG koko:K14818
Hectar predicted targeting categoryother localisation
EggNOG free text desc.smooth muscle cell migration
EggNOG OGsKOG0296@1,KOG0296@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-04_002260.1
Exons10
Model size2164
Cds size1383
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig136.2737.1prot_L-elsbetiae_contig136.2737.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig136 13384..20797 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815526.6288967-UTR-L-elsbetiae_contig136:13339..133831622815526.6288967-UTR-L-elsbetiae_contig136:13339..13383Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig136 13340..13383 +
1691682940.910034-UTR-L-elsbetiae_contig136:13339..133831691682940.910034-UTR-L-elsbetiae_contig136:13339..13383Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig136 13340..13383 +
1622815526.7557893-UTR-L-elsbetiae_contig136:20797..215341622815526.7557893-UTR-L-elsbetiae_contig136:20797..21534Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig136 20798..21534 +
1691682941.01788-UTR-L-elsbetiae_contig136:20797..215341691682941.01788-UTR-L-elsbetiae_contig136:20797..21534Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig136 20798..21534 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815526.6399004-CDS-L-elsbetiae_contig136:13383..134221622815526.6399004-CDS-L-elsbetiae_contig136:13383..13422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 13384..13422 +
1691682940.922111-CDS-L-elsbetiae_contig136:13383..134221691682940.922111-CDS-L-elsbetiae_contig136:13383..13422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 13384..13422 +
1622815526.6514099-CDS-L-elsbetiae_contig136:14669..148071622815526.6514099-CDS-L-elsbetiae_contig136:14669..14807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 14670..14807 +
1691682940.9316857-CDS-L-elsbetiae_contig136:14669..148071691682940.9316857-CDS-L-elsbetiae_contig136:14669..14807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 14670..14807 +
1622815526.6627991-CDS-L-elsbetiae_contig136:14969..151281622815526.6627991-CDS-L-elsbetiae_contig136:14969..15128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 14970..15128 +
1691682940.9399245-CDS-L-elsbetiae_contig136:14969..151281691682940.9399245-CDS-L-elsbetiae_contig136:14969..15128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 14970..15128 +
1622815526.677469-CDS-L-elsbetiae_contig136:15573..156591622815526.677469-CDS-L-elsbetiae_contig136:15573..15659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 15574..15659 +
1691682940.9484959-CDS-L-elsbetiae_contig136:15573..156591691682940.9484959-CDS-L-elsbetiae_contig136:15573..15659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 15574..15659 +
1622815526.6914675-CDS-L-elsbetiae_contig136:15913..160631622815526.6914675-CDS-L-elsbetiae_contig136:15913..16063Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 15914..16063 +
1691682940.958112-CDS-L-elsbetiae_contig136:15913..160631691682940.958112-CDS-L-elsbetiae_contig136:15913..16063Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 15914..16063 +
1622815526.702633-CDS-L-elsbetiae_contig136:16382..164701622815526.702633-CDS-L-elsbetiae_contig136:16382..16470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 16383..16470 +
1691682940.9701095-CDS-L-elsbetiae_contig136:16382..164701691682940.9701095-CDS-L-elsbetiae_contig136:16382..16470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 16383..16470 +
1622815526.7123275-CDS-L-elsbetiae_contig136:18324..185001622815526.7123275-CDS-L-elsbetiae_contig136:18324..18500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 18325..18500 +
1691682940.9810395-CDS-L-elsbetiae_contig136:18324..185001691682940.9810395-CDS-L-elsbetiae_contig136:18324..18500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 18325..18500 +
1622815526.7217133-CDS-L-elsbetiae_contig136:19208..193291622815526.7217133-CDS-L-elsbetiae_contig136:19208..19329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 19209..19329 +
1691682940.9912388-CDS-L-elsbetiae_contig136:19208..193291691682940.9912388-CDS-L-elsbetiae_contig136:19208..19329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 19209..19329 +
1622815526.732195-CDS-L-elsbetiae_contig136:19679..198441622815526.732195-CDS-L-elsbetiae_contig136:19679..19844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 19680..19844 +
1691682940.9996586-CDS-L-elsbetiae_contig136:19679..198441691682940.9996586-CDS-L-elsbetiae_contig136:19679..19844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 19680..19844 +
1622815526.744893-CDS-L-elsbetiae_contig136:20536..207971622815526.744893-CDS-L-elsbetiae_contig136:20536..20797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 20537..20797 +
1691682941.0085833-CDS-L-elsbetiae_contig136:20536..207971691682941.0085833-CDS-L-elsbetiae_contig136:20536..20797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 20537..20797 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig136.2737.1

>prot_L-elsbetiae_contig136.2737.1 ID=prot_L-elsbetiae_contig136.2737.1|Name=mRNA_L-elsbetiae_contig136.2737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=461bp
MSGFDGDGHPEEKTAKAGAEDMQQDDTEEAAGAAAAGGDASNNNGGEFIE
AGDIAAEFEVGNNDDDGDDGMGEEGEEEAGATEEVEDMAGATFTGHSDAV
YCVAVNPKNPSQFISGGGDDKGFLWAVKDDGTVAGSCELGGHTDTVSTVG
FSADGSLAATGCYGGLLKVWEAATGTMKHVLEGPEDVECLAWHTLGNVLL
TGSQDGTVWMWEASNGTCMQVFAGHESKVSCVMFTTSGKAVVSGSDDATV
RVWAPRTGECRHSFSGHGFHVGAVTCLASHPDPDQAAMIMSGGEDGSARM
MHVQNKRVVGTMVHCDAGAGSVEAVGFCATHHPWVATGGTDGSLKVWDAV
SGTCRHTCVHPAAVTRLEWHPAAPVVFTACVDGNARAWDARTGVCTSLFT
GHTDMILDMRLVDPHLPSSPPAAAGGGAADAPVLIVTASDDNSSKVFRWP
SPEAEAAANA*
back to top

mRNA from alignment at L-elsbetiae_contig136:13340..21534+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig136.2737.1 ID=mRNA_L-elsbetiae_contig136.2737.1|Name=mRNA_L-elsbetiae_contig136.2737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8195bp|location=Sequence derived from alignment at L-elsbetiae_contig136:13340..21534+ (Laminarionema elsbetiae ELsaHSoW15)
CTCACACGCAGCACGCGGGCCCTCCCCGCCAACAAAAGAACAAGATGTCA
GGGTTCGATGGAGACGGGCACCCTGAAGAGAAGGTGCGGTTGACAAACGC
TGCGAAAAGGCGAACCCTACCGCACCTCGAGGTACATCTCCACTCATTCG
CTCCTCGACAGCACAGTTACCACACGCGAGCTCCAGGAGGACTGGTGCAA
CATCGCGATGAACTACTACTGTTTTACGCGGGTCTACAGCAGGAATGGGT
AGCTTGCAAAACAGTTTTGAAAGTTCTTAGGCTATAAAAAACAATGCGGT
TCGTCCGCTATGCTCCCCCCCCCCCTCCATGTCGTCGGATTGGACATGGT
GCACAGCAGTGCCCAGAGGGCTCGACCGCTAGATAGTCTAGCCCGCTGAA
GCAGAGAAAGTGTTCGGCGTTGTCGCCGCCTTCTTCGTCCATAAACACTT
GTCGTCGATACATTGTTTGTATGTGCAAGAGGGCTTGGGAATATCAACAA
GCGTTGTAACATACAAAGAGCAGCAGTAGACTCAACCTTGAGAGAGCGTA
CATACTCTAATCTCATTGCCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTC
GCAGAGAATACCCGTCGAACACAGGAGTTCTTGCAAACTACTTGCACGTC
TACTGATCGATTTACTTGCTTCAGTCGCGTTCACTCCAAGCAAAGGCTCA
AATCTGTCCGGTTGAAACATCTGGCCAGTACGTACACCTGCCACCGATGG
CACCAGGATGCGGGACGCGAGATACGAGACTCGAAAGGCGAAGCAAAAAG
TCCGAAAGCGTAATTTCGTGGTAAAGCCGTGTCCCAACTCCTTACCCGTA
ACACTCGGAGCTTGTCCACCCACACCTCCATGCTTTCTGCTCTCTGCATC
GCGATGACATCAGCCGTGTACCTGGAGGTTAAGATCCATGTATTCCACGA
TACGGCGACCGCGGAGGGGGGGGGGGGAGGAAGGGGGAGGAAGACACGGG
GGGGGGGGGGGGGGGGAAAAACCCCCCCGCCCCCAACGGGACGTGCCCGA
AATNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGAGGCAAGACCACTCCGGCACCAACGTCATGGTCCCATGAT
GCCTTGTTTCTATGATGTAAGACACACGTGATTCCTGCCTCTTCTCCACC
CTGCGCAACCCCACTATTGTTGTTCCTGAAATTCGCCGCCCCCTCTATTG
TCAAAACCAACTACCGGACCGGCCAAGAAGACTGCGAAGGCAGGCGCGGA
AGACATGCAGCAAGACGACACTGAAGAAGCTGCAGGAGCAGCAGCAGCGG
GGGGCGATGCTAGCAACAACAACGGCGGAGAGTTTATAGAGGCAGGAGAC
ATCGCAGCAGAATTTGAGGTGGGGTGATGTAAAGCAGTAGTAGTACAGAG
CAGACCCAATCCACATGCACGGCAGGCCGAGTTTTCACAGGGGCACGATT
CGTTAGCCCCGGGCAGAGTGGCATGCAGCAATATTTTTGCTTGAACTCGT
GAATTATTGCTTGTCCGGTCTGGTGCGTAGGTCGGGAACAACGACGATGA
TGGTGACGACGGCATGGGAGAGGAGGGAGAGGAGGAGGCTGGTGCCACCG
AGGAAGTGGAAGATATGGCAGGGGCGACCTTTACCGGACACTCTGACGCG
GTCTACTGCGTTGCGGTCAACCCCAAAAACCCTTCGCAGGTGAAGAATGG
CGTCAATGCAAAAACAATCTCCGAACATTCTTGCGGCTTCATGTTTTCCC
GCGGAAATAGACAGGACGGTTGTTTGACCTGCGAGAACTGGGTTCAGGTT
TGAAAAATCGCTTACGATGTTTTCCCCCTCCAATCCCGCAGCATGCACCT
CTCAGTATGGATTAGTTGCCTTAGCCGTGTCAGGGCACTAGGGCTAACAC
TCTCTCGACCCAGTCAGTCCGCTGCCGCGCTTGCTCACAAATCAAAAATA
GAATATTATGTAGCTAGCTGCTGCTGCCACAGAAAGTCTTGTATAACTTC
TTTCGTTATCGGAGTGCATACTTAATAAAGGATGCAGCGCCAAACCGACT
AATTCCCACTCGTACGTGCGCCTTCCTACTCTGGTGATATCATATGATAC
ACTGGGCATTCTCTGTTGTACATGCACTGTGCAGTTTATCAGCGGAGGTG
GGGACGACAAGGGTTTTCTGTGGGCTGTCAAGGATGACGGCACGGTGGCC
GGCTCCTGCGAACTAGGAGGGTAAGGGTGACAAGTGTTGCTGCTCTTGTT
ATTTCTCGTCGTCGTCGTCGTTGTTGTTGTTGGCGGCGGATTCTGAGGGT
GTGTGGTGGAAGCTTAACGCAAGAGTTAAGGTAGCGGATCTTGAGGTATT
CATAGCCCGCCAAGTACATCCCCTGTCCAAGACTAGGATACGATAGAAAG
AAGGGATTTGTCCTCCCGACGATGACGCAAAGACATTAAAGTTGCGACAT
GGCGCACTTCACGGCTTTTTTCAGGCACACGGACACGGTGTCGACGGTGG
GGTTCAGTGCAGACGGCAGCCTAGCCGCCACCGGCTGCTACGGCGGACTG
TTGAAGGTCTGGGAAGCTGCGACGGGCACGATGAAGCACGTGCTGGAGGG
GCCGGAGGACGTCGAGTGCCTCGCGTGAGTTTATTGACTCGACGTATTGG
TGTGCTTATGTGCTCGGTGTTCGTGCGCATTTGGCTGTTTTGATAAAACT
GGAGATGTGGATCGGTGATCGTGTTGTTCTTTATAATTTTTGATCGTTTG
ATCGGCTGAATGCGTCGCCGGCTCATCCAGATGCTGGCTCGAACTAGCCC
GCGGCGGATATCGATCGGTCGCCGCGCGTGCATACGTTTCATTCTGAGAT
GAATTGCGGGTTTTGATCCGTGCCGTTAAACCCTTTGCAAACCCTTTGCT
GTTCCATCCTTTTGCGACCCCAATTTGTTTCGTTTTTTTCTAGGTGGCAC
ACCTTGGGGAACGTGTTGTTGACAGGGAGTCAGGACGGGACCGTCTGGAT
GTGGGAGGCCTCAAACGGCACGTGCATGCAGGTGTGTATTCGTGTGTACG
GCACAACAGCAGTTGCAGCAGTACCGTGTCTATTCAATCCACACTTGTCT
AATCACCTTTTGGACTGAATATTCCGAACGTTAATTATATATGTTTCCCT
TTTTATTTTGCTTGATTGCGCCGGTTTTCTGTGAGCACGGGAGTCGTCTG
CATGTTGCAGGTACTGGAGCTAAAGGTACTTCCTCGCACGTTTGGTACAC
CACAACTATTTCCAAGCGCCGAACTTCGTCTACCGCCCCCGTATTGCTGC
CAGCTCTCTCGCGCTAGATAATTTCTGATGGCCTAAAAAGCGCCCACCTT
TTCGCGCAAAAGCAGCCCTCACAACCAAGTATTGTAGTAAATCTCATTGT
TTTTTCTTTGTTGCGTTTACAATTATGATCAACACGGGGTTGGGGCCGAG
GCAGTGGTGCCTAGTCAGCAACCTCCATGCCTGGGCTCCTCGTAGGATAG
GGTAAGCAGGATCGGTGACGCGGGAAGGGGGGGAAGAGGAACACTGTAAA
ACGTGTCCCCTCTCACTCCTCCCTCCTTGTCTTCCTTTCTTCTCCTTTCA
TCCTTCCCGAAGAGCAGCGGATTGCGTGAACGACCTTTGATGACTGCGCG
TGCAGAGAACAGCCGGGTGGGCAGATACGGGCCGAACATGAGCTTGGGCA
GAGCATGAGCATGTGGATATTTCGTATGTATCAAAAAATAAAAGTGGTCG
TTGTTGCGCTGCATAGACGATATTTACCCTTTCGGCTCCTTGGATCGTTG
TCGACCGACCACAGCAGCGGGCCTTTGGCCAGACCCCCGCTTGACTCGCC
GCTCGCAGCTTTTTATTGTCAGGTCATGTCATACGTGATGCGGTTCACAA
TCACCTAACAGTGAAATCTAGTCCCACCTCCCCCCCACTGCTGTACTATC
TTGCAACACCGCCGGTGGAGCGATGAGGCGTTTGTCTGTCTGGGGTCTTT
ATGTTTGTTTGTTTGGTTTGTTTGTACTTTCGGCTTGGTTATTGTCCGAT
GTCCTTTCCCTCTTACTGTATCATGGGTATCATGGGTGCGGTACGACGGG
TGGGGAGGGCTATGTAGATCGGTGGCCTGGCCGGCGAGAACCCGGCGCGG
AACACCCCGGCATTGTTTGGGGAACCAAGATAGAACCAGGGGGCGTACCC
CCGCGGTTGGTGATGTTGGCTTGTCCACTTTTGTTTTTCACCTCGCATAG
CGTGTAGAGGGGGCGGAAGGCTCCAGACTATATTTATCTGATCTTTTGTT
TTGTGCTCTGTGGCCCCTCGGGTACATTTTATTTATTTTATTTTTCAGTA
GTCTATACCCTTTTAGGGTAAGTTATCCTGTGACCACGGGAATTGACCGC
GTCAGTGTTGGATTAGTACACGGACTCATGGAGGTGTACTGGATAGAGAG
ATCGGAACGGTTTTTAATGTGAAGACAACAACAACAGTCGAACACACTAT
ACAAGTAGGCTAAAACTGATCGGTCAGTAGGTAGTATCCTCAAATTTGGG
AAAACAAATGGAAATATAAGAAGACTTCACAGTCTACTAGTAGTAAATAA
CTGCTCGATTGTTAAATCAAGCAGGTGAGACTAGGCAGGGCCTCGATGCA
ATCGATCTGCTTGAGGTGGGGACAGGGCCAAGCGAGCGATCTCAGGCCAC
CAAACTCAGAGATTAGATACAGAAAAAGAGACCTCTTCGTTGTTCGATTT
CAGGCTATCAGACTACGGGCGGGCGCATGTGTTCCTCAGCCCAAAATGTC
CCCTCGAGAGTGTCCCAATGGTAAAAACACAAACAGGCATGTGTACATAA
AGTACACCACAACAACATGTCTGACTCGCTTCCAGGTGTTTGCGGGGCAC
GAGAGCAAGGTGTCCTGCGTCATGTTCACCACCTCCGGCAAAGCAGTGGT
TTCGGGTTCGGACGACGCCACCGTGAGGGTCTGGGCTCCGAGGACGGGGG
AGTGCAGGCACTCCTTCTCCGGCCACGGCTTCCACGTGGGCGCGGTCACT
TGCTTAGCGAGGTGGGCGTGACGATGGCAACGCGTGATAGCGTACAGCAG
TAGTTGCAGCACTGGTGTGTGTCGCTTGTCGGAGGTGTTTTTAGTTTCTT
CCTTATTGTGTCGCGTTTTCACCTCGTGCCTTGGTTTGTTTGTTTTGGGC
ACCGCGGTGTTTGCAGGTTTGAAGGTTGATTGAGCGGTTATAGCAACTAA
TAGCGGCATAACAACGTATTGATTTAACACAGCCGCTAGGTTCCCCTGCT
GCGGTGTACAGGAGTATACTGCCATACATTTTGTAGGCGTTCAGCAGGCG
TGTTCGCAGTGTTGCGTTTTCGACAACGGAGGGGTGGGTGTCGCGGCAGG
CGCTCATTCTCTCTCGGCAAGAACTGCCCGTAGCTTTCAAAGCGGTCACC
TACCCGACCGGGGTAAATGTACTGCTTCCGTATCGTATCGTATCGACAGC
AACTCCAACTGCCTCCGTTGCACTTTGATGAAAAGACCCAAGGCATGTGT
TGATGCTTTGTGGTTTGAGATCTTACTCGCACGTTCTCATTTTCTTGCGT
GCGCGCATCTAGTTGGTTCCCTTGTCGACACCTGCCCCCGGTTTCCTATC
TAGCCATTCCTATCTAGCCAATCACCCACCTTTTATTAGTACATACACCT
GTTTTGCTGTGTTTCTTTGTTCGCTGCACCTCATTTCGCTTCACGTCACC
TCACGTCTCCTCACGCCAGTCATCCAGACCCCGATCAGGCGGCCATGATA
ATGTCCGGCGGGGAGGATGGCTCAGCGCGCATGATGCACGTGCAGAATAA
GCGCGTGGTGGGGACCATGGTGCACTGCGACGCGGGAGCGGTGAGAGGCG
TGTTTCGGCGGCGGGGGGGAGGTCGGCGAAACGGGGTAGAGATGGTATAC
ACAGTAGTAGTGCCAAGGGCGGCCGTCGTCATCAGAACGAAGACCTCCTT
ACCCTGTTGCCTGTCGTAATATGCCAAGGCGGGGGGCCGGTGCCTGGGTT
TTGGTAGTCCGGCAGCCAGATCGAGAAGCGGGACTTTCGTCCCCCCCTTG
AAATGTTCTTTTTAGCCACCGTACGCTGTAGTGATCTTCCGATCTGTATG
CTTGACATCTATCCCTGTGTCGGACGCATCCTCCGATCCCCCGATCACTC
CATAACGCTAACGCCTCTCGCACCACCCTGGCGCACGCAGGGATCGGTGG
AAGCTGTCGGCTTCTGCGCGACGCACCACCCCTGGGTGGCCACCGGCGGC
ACAGACGGCAGTCTCAAGGTGTGGGACGCCGTGTCTGGCACATGCCGGCA
CACGTGCGTGCACCCGGCGGCTGTAACGAGGCTGGAGTGGCACCCAGCAG
CTCCGGTGAGTGGCGCGCTCGAAGTCATTTTTTCATCTCGTCCACCCGGC
CAACCAGCCACGCACTTCCTCCGCTGCCCCTTCTGCCGCTCCCTTTTTGT
TTCCCTTTGCCCTTTGCTCCCTGCCGCGTCATATGCAGTTGGTGCTCCCC
CACCCCAAAAAACGCGTGCACACCTGTCGGGAAAATCGGAACGGGGATGC
TCTTACTGTGATCGGTAAACGGAGTTAATTAGACCGCACAACAATTTGAC
CCCCTCCGTAAACCCGTTTTGCGGAACCCCCGGTCCTGTTTGGGTATTGT
GCGTGTTCTCGACGGCTCTAGCAGTAAGCAGTAACCACGGGCGGAGTCCG
TAGTCTAGGGAGAGACGCATCCCACCCACCCACCGGCCAGCCGCGTACGC
ACACACGCCGAACGATAGCACACACACAACCCTTAAATACTACCAACCTA
ACCCTGACCCTAACCCACCCACCGCGGTGCTTCGCACACCTTCCAACCTA
ACCCAACCCTGCGAAATCAGTCTGATGTGGTCGAGCGTAGAGGCAGCATT
CGGTACAAAGCGCACGCAACATTCGATACCAAAGCGCATCACGCAGCATT
CGGTGCACCGTGTTTAATCACCATACATTCGTTGGATTGTTAACGAGTCG
AGTATCCCACCCCCGCCCCCGGCGCCGTTTTGTGCCGCCGCGTGCAGGTG
GTGTTCACGGCTTGCGTCGACGGCAACGCAAGAGCTTGGGACGCCCGCAC
AGGGGTATGCACGAGCTTGTTCACCGGCCATACCGACATGATCCTGGACA
TGCGATTGGTCGACCCTCACTTGCCGTCGTCGCCGCCCGCAGCGGCCGGA
GGAGGCGCGGCGGATGCTCCAGTTTTGATCGTGACCGCGTCGGATGACAA
CTCGTCGAAGGTTTTCCGATGGCCTTCTCCGGAGGCGGAAGCCGCTGCGA
ACGCATAGTCGCGTGCGTGTGTCGGGTGAATGCGTATTGGTAAAGAACCG
TGGGGGGTTGGCTTGAAGGGGGTTATCGTACTTTCGTGTCGTTGTGTGCG
CATGTCGTGTTTGGAAAGACCCAGTGTGTGTATGGCGGTTCTGTCGTGAT
CACCGCTGGTGTATTGTAGGTTCGTATGATCACCGCTGGTGTAGGTTCGT
ACGATGTCTGTGGGTGTGGTGCAGGTGTTCCGATGGCCCTCTCTCTGATG
CCCAACGCGGTGCAATAGTAGTAGTATGGTCATAGCAGTACATTAGAACT
CCTACGCGTGAGCGGGATCACCTTGCTACTCCTGTAGTGCCCTCGCTCTG
CCAAATTGCTCGGACTGTCAGTCGCATATCGTGGACAAAAGCGGATAATT
ATATACCCCGCCCGTAAACATTCGGGCTTCAAGTTGGAAGAAAAATGAAC
CGTGCGAATGGCAGAGAGCCCGAGTACACGCAGCTGTTTCTGACAGCTAG
GTAGCTGTAGCTTTGTTATTTCGGGGGCACTTTGATTTGAAAAACCCTAA
CCCTATGTACCTATCATCACCTGTTTTTGTGTGTGGCATTCAACGGGGAG
TGGTGAAACCTTCATATGGATGAGCAAATGCACTGTGAAGTGTAATGGGA
GTCAGCTAGTGGTTCCCGCGATTGGAAAGTAGGATCTATCGCCTAGTTCA
TCTAGGTTGGTCGACCCACACGCCGTCAAGCACCTCCATCCAATT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig136:13340..21534+

>mRNA_L-elsbetiae_contig136.2737.1 ID=mRNA_L-elsbetiae_contig136.2737.1|Name=mRNA_L-elsbetiae_contig136.2737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2766bp|location=Sequence derived from alignment at L-elsbetiae_contig136:13340..21534+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAGGGTTCGATGGAGACGGGCACCCTGAAGAGAAGATGTCAGGGTT
CGATGGAGACGGGCACCCTGAAGAGAAGACTGCGAAGGCAGGCGCGGAAG
ACATGCAGCAAGACGACACTGAAGAAGCTGCAGGAGCAGCAGCAGCGGGG
GGCGATGCTAGCAACAACAACGGCGGAGAGTTTATAGAGGCAGGAGACAT
CGCAGCAGAATTTGAGACTGCGAAGGCAGGCGCGGAAGACATGCAGCAAG
ACGACACTGAAGAAGCTGCAGGAGCAGCAGCAGCGGGGGGCGATGCTAGC
AACAACAACGGCGGAGAGTTTATAGAGGCAGGAGACATCGCAGCAGAATT
TGAGGTCGGGAACAACGACGATGATGGTGACGACGGCATGGGAGAGGAGG
GAGAGGAGGAGGCTGGTGCCACCGAGGAAGTGGAAGATATGGCAGGGGCG
ACCTTTACCGGACACTCTGACGCGGTCTACTGCGTTGCGGTCAACCCCAA
AAACCCTTCGCAGGTCGGGAACAACGACGATGATGGTGACGACGGCATGG
GAGAGGAGGGAGAGGAGGAGGCTGGTGCCACCGAGGAAGTGGAAGATATG
GCAGGGGCGACCTTTACCGGACACTCTGACGCGGTCTACTGCGTTGCGGT
CAACCCCAAAAACCCTTCGCAGTTTATCAGCGGAGGTGGGGACGACAAGG
GTTTTCTGTGGGCTGTCAAGGATGACGGCACGGTGGCCGGCTCCTGCGAA
CTAGGAGGTTTATCAGCGGAGGTGGGGACGACAAGGGTTTTCTGTGGGCT
GTCAAGGATGACGGCACGGTGGCCGGCTCCTGCGAACTAGGAGGGCACAC
GGACACGGTGTCGACGGTGGGGTTCAGTGCAGACGGCAGCCTAGCCGCCA
CCGGCTGCTACGGCGGACTGTTGAAGGTCTGGGAAGCTGCGACGGGCACG
ATGAAGCACGTGCTGGAGGGGCCGGAGGACGTCGAGTGCCTCGCGCACAC
GGACACGGTGTCGACGGTGGGGTTCAGTGCAGACGGCAGCCTAGCCGCCA
CCGGCTGCTACGGCGGACTGTTGAAGGTCTGGGAAGCTGCGACGGGCACG
ATGAAGCACGTGCTGGAGGGGCCGGAGGACGTCGAGTGCCTCGCGTGGCA
CACCTTGGGGAACGTGTTGTTGACAGGGAGTCAGGACGGGACCGTCTGGA
TGTGGGAGGCCTCAAACGGCACGTGCATGCAGGTGGCACACCTTGGGGAA
CGTGTTGTTGACAGGGAGTCAGGACGGGACCGTCTGGATGTGGGAGGCCT
CAAACGGCACGTGCATGCAGGTGTTTGCGGGGCACGAGAGCAAGGTGTCC
TGCGTCATGTTCACCACCTCCGGCAAAGCAGTGGTTTCGGGTTCGGACGA
CGCCACCGTGAGGGTCTGGGCTCCGAGGACGGGGGAGTGCAGGCACTCCT
TCTCCGGCCACGGCTTCCACGTGGGCGCGGTCACTTGCTTAGCGAGGTGT
TTGCGGGGCACGAGAGCAAGGTGTCCTGCGTCATGTTCACCACCTCCGGC
AAAGCAGTGGTTTCGGGTTCGGACGACGCCACCGTGAGGGTCTGGGCTCC
GAGGACGGGGGAGTGCAGGCACTCCTTCTCCGGCCACGGCTTCCACGTGG
GCGCGGTCACTTGCTTAGCGAGTCATCCAGACCCCGATCAGGCGGCCATG
ATAATGTCCGGCGGGGAGGATGGCTCAGCGCGCATGATGCACGTGCAGAA
TAAGCGCGTGGTGGGGACCATGGTGCACTGCGACGCGGGAGCGTCATCCA
GACCCCGATCAGGCGGCCATGATAATGTCCGGCGGGGAGGATGGCTCAGC
GCGCATGATGCACGTGCAGAATAAGCGCGTGGTGGGGACCATGGTGCACT
GCGACGCGGGAGCGGGATCGGTGGAAGCTGTCGGCTTCTGCGCGACGCAC
CACCCCTGGGTGGCCACCGGCGGCACAGACGGCAGTCTCAAGGTGTGGGA
CGCCGTGTCTGGCACATGCCGGCACACGTGCGTGCACCCGGCGGCTGTAA
CGAGGCTGGAGTGGCACCCAGCAGCTCCGGGATCGGTGGAAGCTGTCGGC
TTCTGCGCGACGCACCACCCCTGGGTGGCCACCGGCGGCACAGACGGCAG
TCTCAAGGTGTGGGACGCCGTGTCTGGCACATGCCGGCACACGTGCGTGC
ACCCGGCGGCTGTAACGAGGCTGGAGTGGCACCCAGCAGCTCCGGTGGTG
TTCACGGCTTGCGTCGACGGCAACGCAAGAGCTTGGGACGCCCGCACAGG
GGTATGCACGAGCTTGTTCACCGGCCATACCGACATGATCCTGGACATGC
GATTGGTCGACCCTCACTTGCCGTCGTCGCCGCCCGCAGCGGCCGGAGGA
GGCGCGGCGGATGCTCCAGTTTTGATCGTGACCGCGTCGGATGACAACTC
GTCGAAGGTTTTCCGATGGCCTTCTCCGGAGGCGGAAGCCGCTGCGAACG
CATAGGTGGTGTTCACGGCTTGCGTCGACGGCAACGCAAGAGCTTGGGAC
GCCCGCACAGGGGTATGCACGAGCTTGTTCACCGGCCATACCGACATGAT
CCTGGACATGCGATTGGTCGACCCTCACTTGCCGTCGTCGCCGCCCGCAG
CGGCCGGAGGAGGCGCGGCGGATGCTCCAGTTTTGATCGTGACCGCGTCG
GATGACAACTCGTCGAAGGTTTTCCGATGGCCTTCTCCGGAGGCGGAAGC
CGCTGCGAACGCATAG
back to top