prot_L-elsbetiae_contig10204.252.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10204.252.1
Unique Nameprot_L-elsbetiae_contig10204.252.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length202
Homology
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: D7FQG4_ECTSI (Cilia- and flagella-associated protein 52 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG4_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 3.730e-133
Identity = 189/201 (94.03%), Postives = 195/201 (97.01%), Query Frame = 0
Query:    1 MAAVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            MA VGSD TELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVR MTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDL+QAQANCDA++PSG GVLLHRLKQHLGHVR++DFSFDG+YFASLGGQDDNSVVIWE  TGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK
Sbjct:    1 MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPSGAGVLLHRLKQHLGHVRAVDFSFDGKYFASLGGQDDNSVVIWEAKTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A835Z6M8_9STRA (Cilia- and flagella-associated protein 52 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M8_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.550e-92
Identity = 131/199 (65.83%), Postives = 163/199 (81.91%), Query Frame = 0
Query:    3 AVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            A+  D  EL L +CIGF+G VLGG+K+TPCG Y VYPLG +++VR +TG  K AFLEGHT++I CVAMS DG R+ +GQ NH GVKAD+C+WD+ +A  NCD+  P G GVLL R +QHLG V+ LDFS DGRY A+LGGQDDN++V+W+ DTGRA+CG+PAAQDSAL++KWL+RRNDR VTAGN++LRVWQVDV IPK
Sbjct:    2 ALAEDAPELNLEACIGFSGHVLGGLKVTPCGNYTVYPLGKMMIVRSLTG-GKTAFLEGHTNDICCVAMSPDGKRLATGQVNHPGVKADVCIWDMSRAVRNCDSHDPHGAGVLLSRFRQHLGKVQCLDFSCDGRYLATLGGQDDNTLVVWDIDTGRAICGAPAAQDSALAIKWLNRRNDRLVTAGNYNLRVWQVDVRIPK 199          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A6V1NYK3_HETAK (Cilia- and flagella-associated protein 52 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NYK3_HETAK)

HSP 1 Score: 250 bits (639), Expect = 2.310e-76
Identity = 113/199 (56.78%), Postives = 155/199 (77.89%), Query Frame = 0
Query:    3 AVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            A+  + TEL+L+S IGF+G+V  G+K  PCG Y+VYPLGSI+V+R +  +NKQ+FLEGHT  ++C+A+S DGTR+ SGQ +H GVKAD+ VWDL +A+ NC    PS  G ++HRL QHLG V+++DFS D ++  +LGG+DDN++V+WE  TGR +CG+PA  D+AL  +WL  R+DR VTAGN+HLRVWQVDV++PK
Sbjct:    2 AIAENATELQLNSVIGFSGEVPDGLKYLPCGEYIVYPLGSIIVLRHLQ-ENKQSFLEGHTQGVTCLAVSHDGTRLASGQTHHSGVKADVIVWDLEKAKENCRNGTPSAGGEVVHRLFQHLGKVQAVDFSCDDQFLLTLGGRDDNALVVWEAATGRPICGAPAGADAALCARWLRNRSDRLVTAGNYHLRVWQVDVALPK 199          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A7S3H4V8_9STRA (Cilia- and flagella-associated protein 52 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4V8_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.210e-69
Identity = 107/193 (55.44%), Postives = 144/193 (74.61%), Query Frame = 0
Query:   10 ELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPS-GTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            ELK+ S IGF GKV   +  TPCG Y+VYPLGS +V++ M  + K+AF +GHTSEISCV +S+DG R+ SGQ N MGVKAD+ +WDL QA+   D+     G    ++RLKQHLG V+ + FS +  Y A++GGQDDN++V+W+ ++G A+CG+PAA DSA+  KWL+ RNDR VTAGN+H+RVWQ+D S+PK
Sbjct:    4 ELKIKSVIGFNGKVNNALVYTPCGKYIVYPLGSFVVLKNMVTE-KEAFFDGHTSEISCVTVSADGNRLASGQINLMGVKADVIIWDLAQAKKLLDSGVVMVGDSTCIYRLKQHLGRVQDVSFSPNNAYLATIGGQDDNTIVVWDAESGTAICGAPAASDSAICCKWLNGRNDRLVTAGNYHIRVWQIDFSLPK 195          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: F0Y0S5_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0S5_AURAN)

HSP 1 Score: 193 bits (490), Expect = 1.590e-54
Identity = 95/207 (45.89%), Postives = 137/207 (66.18%), Query Frame = 0
Query:    3 AVGSDVTELKLHSCIGFTGKVLGGMK------LTPCGGYMVYPLGSILVVR--GMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            A+  D ++LKL   IGF+G V  G+       L     +++YPLGS++VVR  G   +   AFL+GH++++SC+ +S DG R+ SGQ +H GV AD+ VWDLV+A     A   +   VLLHRL+QH G V+++  +      A+LGG+DDN++VIW+ ++G  +CG PAA D+AL+++WLH   DR +T G  HLRVWQVDVS+PK
Sbjct:    2 ALAEDSSQLKLDGIIGFSGSVQDGVHVVRSEHLPGSREWIIYPLGSLVVVRQTGTGSRAVVAFLQGHSNDVSCLCVSGDGRRLASGQDSHQGVAADVIVWDLVEACEGALAGESASEKVLLHRLRQHKGSVQAVGINSTDSLLATLGGRDDNALVIWDLESGEPICGQPAAADNALALQWLHGNPDRLITCGARHLRVWQVDVSLPK 208          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: K0S6T1_THAOC (Cilia- and flagella-associated protein 52 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6T1_THAOC)

HSP 1 Score: 190 bits (482), Expect = 1.980e-53
Identity = 95/199 (47.74%), Postives = 126/199 (63.32%), Query Frame = 0
Query:    4 VGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLE-GHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            +GS    L L S IGFTG + GG+   PCG ++V+PLGS+ V++ ++ K KQ FL+ G    +SCVA+S DG  +  G       KA++ VWDL +       +       +LH L QH   V S+DFS DGR+ A+LGG DDN +V+W+ +TG AVCGSPAA D++  VKWLH RNDRFVT G  H+RVWQV V  P+
Sbjct:    1 MGSPPPNLALKSAIGFTGSICGGLHYLPCGKFVVFPLGSVAVLKSLSTK-KQYFLDAGVDKNVSCVAISGDGRYLACGHETTASFKAEVLVWDLNRVLRAYAKNEELSKDCVLHTLFQHYKRVESVDFSCDGRHLATLGGLDDNDLVVWDCETGVAVCGSPAATDASHCVKWLHDRNDRFVTCGQLHVRVWQVCVKTPR 198          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A482SVC4_9ARCH (Cilia- and flagella-associated protein 52 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVC4_9ARCH)

HSP 1 Score: 186 bits (471), Expect = 4.620e-52
Identity = 85/163 (52.15%), Postives = 121/163 (74.23%), Query Frame = 0
Query:   40 LGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPS-GTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            +GS +V++ +   +++AFL+GH+ +++CV MS++G R+ SGQ +  GVKAD+ +WDL  A+   D+     G   LLHRLKQHLG V+ + FS    + A++GGQDDN++VIW  DTG A+CGSPAA DSA+ VKWL+ R+DR VTAGN+H+RVWQ+D S+PK
Sbjct:    1 MGSFIVIKNLL-TDREAFLDGHSQDVTCVGMSNNGNRLASGQMHFTGVKADVIIWDLEAAKQLLDSGVIMLGERCLLHRLKQHLGKVQDVAFSNHDEFLATIGGQDDNALVIWNADTGEAICGSPAAMDSAICVKWLNNRHDRVVTAGNYHVRVWQIDFSLPK 162          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: F0YDJ7_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ7_AURAN)

HSP 1 Score: 183 bits (465), Expect = 4.590e-51
Identity = 94/201 (46.77%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    7 DVTELKLHSCIGFTGKVLGGMKLTPCGG--YMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGV----LLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            D+  L   SC+GF+G VLGG+      G  ++ +PLG+++VV+  T K   AFL+GH+  +SCVA+S D   + SGQ N +GV+A + +WDL +A   C+     G G      +H L+QHL  V++L FS D R  A++GG+DDNS+VIW+T TG A+CG PAA D+ L V WL R   R VTAG +H+RVW VD S PK
Sbjct:    6 DIAALHPSSCLGFSGGVLGGLHAVSYRGEPFITFPLGAMVVVKHATRKEGVAFLQGHSRSVSCVAVSHDCRMLASGQTNQLGVEAPVMLWDLEEA---CERVLQGGAGHGSLGPVHVLRQHLAGVQALSFSCDDRSLATIGGRDDNSLVIWDTRTGNAICGVPAAPDTVLCVSWLKRNPHRLVTAGKYHVRVWHVDPSGPK 203          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A7S1U044_9STRA (Cilia- and flagella-associated protein 52 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U044_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.950e-51
Identity = 82/138 (59.42%), Postives = 106/138 (76.81%), Query Frame = 0
Query:   64 EISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
            ++S +A+S DGT I +GQ  H+GVKAD+ VWDL +A+A CDA   S    +L+ L+QH G + S+DFS D RY AS+GGQDDNS+V+W+ ++GR +CGSPAA D AL +KWLH RNDR VTAG+FHLRVWQ+D S PK
Sbjct:   39 DVSTLAVSRDGTMIATGQKQHLGVKADIIVWDLTEAKARCDAGE-SVCDAVLYTLRQHSGGIMSVDFSCDSRYLASVGGQDDNSLVVWDLESGRPICGSPAATDQALCLKWLHGRNDRLVTAGHFHLRVWQIDASFPK 175          
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A7R9VFB0_9CHLO (Cilia- and flagella-associated protein 52 n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VFB0_9CHLO)

HSP 1 Score: 178 bits (452), Expect = 3.210e-49
Identity = 84/188 (44.68%), Postives = 123/188 (65.43%), Query Frame = 0
Query:   11 LKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVS 198
            L L+S +GF G +  G+ + P G  ++YPLGS +V+R       Q FL+GH+ ++SC+A+S  G  + SGQ  +MG  AD+ +WDL   Q             L+HR+  H   +++LDFS D RY ASLGGQDDN++V+W+ +TGRA+CGSPA  + +L+VK+ +  NDR VT GN++LRVW+ D+S
Sbjct:    5 LGLNSVVGFGGGIENGLVVHPDGRTLIYPLGSTIVLRDKNDPRAQEFLQGHSDKVSCLALSKSGRYLASGQITYMGFTADIIIWDLETRQ-------------LMHRMALHKVKIQALDFSCDERYLASLGGQDDNALVLWDVETGRAICGSPAHTNFSLTVKFFNNANDRLVTGGNYNLRVWEYDLS 179          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQG4_ECTSI3.730e-13394.03Cilia- and flagella-associated protein 52 n=2 Tax=... [more]
A0A835Z6M8_9STRA2.550e-9265.83Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
A0A6V1NYK3_HETAK2.310e-7656.78Cilia- and flagella-associated protein 52 n=2 Tax=... [more]
A0A7S3H4V8_9STRA1.210e-6955.44Cilia- and flagella-associated protein 52 (Fragmen... [more]
F0Y0S5_AURAN1.590e-5445.89Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
K0S6T1_THAOC1.980e-5347.74Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
A0A482SVC4_9ARCH4.620e-5252.15Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
F0YDJ7_AURAN4.590e-5146.77Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
A0A7S1U044_9STRA4.950e-5159.42Cilia- and flagella-associated protein 52 n=2 Tax=... [more]
A0A7R9VFB0_9CHLO3.210e-4944.68Cilia- and flagella-associated protein 52 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 155..194
e-value: 54.0
score: 6.1
coord: 51..95
e-value: 0.0064
score: 25.7
coord: 111..152
e-value: 0.0055
score: 25.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 114..151
e-value: 6.4E-6
score: 26.8
coord: 54..95
e-value: 0.0063
score: 17.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 26..201
e-value: 2.4E-31
score: 110.9
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 9..196
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 139..153
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10204contigL-elsbetiae_contig10204:3408..6138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10204.252.1mRNA_L-elsbetiae_contig10204.252.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10204 3408..6138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10204.252.1 ID=prot_L-elsbetiae_contig10204.252.1|Name=mRNA_L-elsbetiae_contig10204.252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MAAVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMT
GKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQ
ANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVI
WETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIP
KA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf