prot_L-elsbetiae_contig13144.2464.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13144.2464.1
Unique Nameprot_L-elsbetiae_contig13144.2464.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length90
Homology
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BLAST of mRNA_L-elsbetiae_contig13144.2464.1 vs. uniprot
Match: D7FT02_ECTSI (Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT02_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.650e-6
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:   38 HIIALIAIKTQYKDETDNAYVAPGATANTSS 68
            HI ALIA+KTQYKDET  AYVAPGATAN SS
Sbjct:  609 HIDALIALKTQYKDETGKAYVAPGATANASS 639
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13144.2464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT02_ECTSI1.650e-683.87Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13144contigL-elsbetiae_contig13144:1988..4990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13144.2464.1mRNA_L-elsbetiae_contig13144.2464.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13144 1986..4990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13144.2464.1 ID=prot_L-elsbetiae_contig13144.2464.1|Name=mRNA_L-elsbetiae_contig13144.2464.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=90bp
VVERNPQPPPQWLPRSSRRGRHPRVEEVQGGPGQPPAHIIALIAIKTQYK
DETDNAYVAPGATANTSSGGGAVPPRSTPRRRLRLWGTMR
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