prot_L-elsbetiae_contig13085.2435.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13085.2435.1
Unique Nameprot_L-elsbetiae_contig13085.2435.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length60
Homology
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BLAST of mRNA_L-elsbetiae_contig13085.2435.1 vs. uniprot
Match: A0A6H5JU58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU58_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.330e-19
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 0 
Query:    1 LSLSHNLVRRTEELLPLASLPLLEALSLEGSPVCGAANYRAHVVSLAPPCLRMLDRREV 59
            LS+SHNLVRRTE+L PL+ L  LE LSLEG+PVCGAANYRAHVVSLA  CL+ LD REV
Sbjct:  125 LSISHNLVRRTEDLHPLSLLAHLETLSLEGNPVCGAANYRAHVVSLASACLKTLDGREV 183
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BLAST of mRNA_L-elsbetiae_contig13085.2435.1 vs. uniprot
Match: D8LLH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH8_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.500e-18
Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0 
Query:    1 LSLSHNLVRRTEELLPLASLPLLEALSLEGSPVCGAANYRAHVVSLAPPCLRMLDRREV 59
            LS+SHNLVRRTE+L PL+ L  LE LSLEG+PVCGAANYRAHVVSLA  CL+ LD RE+
Sbjct:  131 LSISHNLVRRTEDLHPLSLLAHLEMLSLEGNPVCGAANYRAHVVSLASACLKTLDGREM 189
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13085.2435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU58_9PHAE4.330e-1976.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLH8_ECTSI1.500e-1874.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..60
e-value: 6.2E-11
score: 43.7
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13085contigL-elsbetiae_contig13085:5071..5250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13085.2435.1mRNA_L-elsbetiae_contig13085.2435.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13085 5071..5250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13085.2435.1 ID=prot_L-elsbetiae_contig13085.2435.1|Name=mRNA_L-elsbetiae_contig13085.2435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp
LSLSHNLVRRTEELLPLASLPLLEALSLEGSPVCGAANYRAHVVSLAPPC
LRMLDRREVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf