mRNA_L-elsbetiae_contig13036.2407.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI) HSP 1 Score: 158 bits (399), Expect = 3.350e-43 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 Query: 4 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV Sbjct: 118 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 194
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE) HSP 1 Score: 158 bits (399), Expect = 3.360e-43 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 Query: 4 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV Sbjct: 284 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 360
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A7R9VVS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVS4_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.310e-27 Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 1 Query: 4 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 V +QP+ASQGW+E+ KLEEE GDL +C+ +L GL++CEY+E LL KA+K EER G+L AR+LL+RLKHVGIE V Sbjct: 36 VCTLQPYASQGWLEFSKLEEESGDLDKCACLLNEGLSYCEYNENLLTKAIKHEERMGDLTRARQLLARLKHVGIEQV 112
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A7S0PWJ1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWJ1_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.870e-27 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 1 QVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 QV K+QP+ASQGW+EY KLEEE G L C++ILRRGL +C++SE LL +A+K EE+ GNL GAR+LL+RLKHVGI+ V Sbjct: 762 QVCKLQPYASQGWLEYSKLEEECGHLKTCARILRRGLEYCKFSENLLTRAIKHEEKMGNLGGARQLLARLKHVGIDKV 839
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.620e-25 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 1 Query: 4 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 V +QP+ASQGW+E+ KLEEE G+L RC+ +L GL++CEY+E LL KA+K EER GNL AR+LL+RLKHVGIE V Sbjct: 1084 VCTLQPYASQGWLEFSKLEEESGNLERCASLLSEGLSYCEYNENLLTKAIKHEERMGNLTRARQLLARLKHVGIEKV 1160
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A448YUD9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUD9_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.020e-25 Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 1 QVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 QV K+QP+ASQGW+E+ KLEEE G+++ C++IL GL +CEYSE+LL +A+K EE+ GNL ARE L+RLKHVGIE V Sbjct: 1062 QVYKLQPYASQGWLEFSKLEEECGNMNACAKILSAGLEYCEYSESLLSRAIKHEEKRGNLGRAREFLARLKHVGIEKV 1139
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A1E7FB42_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB42_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.540e-25 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 1 QVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 QV +QP+ASQGW+E+ KLEEE G+++ C++IL GL +CEYSE LL +A+K EE+ GN+ ARELLSRLKHVGIE V Sbjct: 203 QVYTLQPYASQGWLEFSKLEEECGNMNACAKILFAGLEYCEYSENLLTRAIKHEEKRGNISRARELLSRLKHVGIEKV 280
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A7S4PH40_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH40_9EUKA) HSP 1 Score: 103 bits (256), Expect = 6.800e-25 Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 1 QVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIE 228 QV +MQPFASQGW+E+ K+EEE GD+ RC ++L RGL FC Y+E LL+K +K +ER GN+ AR LLSRLK V ++ Sbjct: 85 QVHRMQPFASQGWLEHAKMEEECGDMERCGRVLNRGLFFCPYNENLLVKGIKHQERIGNIQAARALLSRLKRVTVD 160
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: B7FTG6_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTG6_PHATC) HSP 1 Score: 105 bits (261), Expect = 1.390e-24 Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 1 Query: 4 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 V + QP+ASQGW+EY KLEEE G ++R + IL GL +CEYSE LL +AVK +E+ GN++GARELL+RLKHVGI+ V Sbjct: 224 VCQQQPYASQGWLEYSKLEEECGHMNRVTNILHAGLEYCEYSENLLTRAVKHQEKMGNVNGARELLARLKHVGIDKV 300
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Match: A0A7S4DG20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG20_HETAK) HSP 1 Score: 100 bits (249), Expect = 3.270e-24 Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 4 VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENV 234 V ++QP+A+QGW+EY KLEEE G L CS+IL RGL FC YSE+LLIKA+K ER G L AR LL+RLK G+E V Sbjct: 93 VCRLQPYAAQGWLEYAKLEEEGGHLETCSRILHRGLMFCHYSESLLIKAIKHFERLGQLRPARVLLARLKRAGVEKV 169 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13036.2407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13036.2407.1 >prot_L-elsbetiae_contig13036.2407.1 ID=prot_L-elsbetiae_contig13036.2407.1|Name=mRNA_L-elsbetiae_contig13036.2407.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=74bp MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEback to top mRNA from alignment at L-elsbetiae_contig13036:550..783- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13036.2407.1 ID=mRNA_L-elsbetiae_contig13036.2407.1|Name=mRNA_L-elsbetiae_contig13036.2407.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=234bp|location=Sequence derived from alignment at L-elsbetiae_contig13036:550..783- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13036:550..783- >mRNA_L-elsbetiae_contig13036.2407.1 ID=mRNA_L-elsbetiae_contig13036.2407.1|Name=mRNA_L-elsbetiae_contig13036.2407.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=444bp|location=Sequence derived from alignment at L-elsbetiae_contig13036:550..783- (Laminarionema elsbetiae ELsaHSoW15)back to top |