mRNA_L-elsbetiae_contig12996.2365.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12996.2365.1
Unique NamemRNA_L-elsbetiae_contig12996.2365.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: D8LDT1_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 1.760e-179
Identity = 266/278 (95.68%), Postives = 275/278 (98.92%), Query Frame = 1
Query:  124 NMAFCFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ 957
            NMAFCFQCVSNS+VGVVERLGKFTGLA+PGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYV+DVVRSTLPK+DLDQAFDSKEDIA+AVK+QLE VMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSV+ F++ IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ
Sbjct:  112 NMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ 389          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: A0A6H5KBQ9_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE)

HSP 1 Score: 483 bits (1243), Expect = 3.180e-169
Identity = 247/278 (88.85%), Postives = 267/278 (96.04%), Query Frame = 1
Query:  124 NMAFCFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ 957
            NMA CFQC+ N+++GV+ERLGK+ GLA PG  CI+WP+D IVAK+STRVQQLDVRMETKTKDNVFVTAVVSVQYQPIK KIYDAFYRLTDP+AQIRSYVYDVVRSTLPK+DLDQAFDSKEDIA+AVK+QLE VM+EYGYQILQALVTDMDPD RVK AMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSV+TFS+TIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVA++Q+AMRDGFMQ
Sbjct:   71 NMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQSAMRDGFMQ 348          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: A0A835YL74_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 1.860e-139
Identity = 203/274 (74.09%), Postives = 243/274 (88.69%), Query Frame = 1
Query:  136 CFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ 957
            C  CV  S+VGVVER G+F  LA PGL+ + WP+  +V  ISTRVQQLDV+ ETKT DNVF+T  V VQYQ + +K+YDAFYRLTDP++QIRSYVYDV+RST+PK++LDQAF +KE++A AVK+QL  VM+EYGYQILQALVTD++PD RVK+AMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQR+AIV GLRDS+  FS +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++++T+FLPHAP+SVA++Q AMRDGFMQ
Sbjct:    7 CCICVQTSEVGVVERFGQFEKLAKPGLSLVFWPLSQVVGTISTRVQQLDVQAETKTSDNVFITVNVCVQYQVLYDKVYDAFYRLTDPKSQIRSYVYDVIRSTMPKLELDQAFAAKEEVAHAVKEQLTVVMQEYGYQILQALVTDLEPDRRVKDAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESVASLQGAMRDGFMQ 280          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: A0A6S8S5L6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S5L6_9STRA)

HSP 1 Score: 338 bits (868), Expect = 2.050e-113
Identity = 172/278 (61.87%), Postives = 218/278 (78.42%), Query Frame = 1
Query:  124 NMAFCFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQS-SRAATVFLPHAPQSVAAIQAAMRDGFM 954
            N  FC  CV  + V +VER GKF  +  PG  C++WP+D IV ++S RV+QLDV  ETKTKDNVFV  V+SVQYQ + EK +DAFY+L +P+ QI++YV+DVVRS LPKM+LD++F +KE +A  VK  L+  M  +GY I++ALVTD+ PD RVK +MNEINAS+R+REAA  KAEADKI+QVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+  FS  I GT+PKDVMDLLLLTQYFDML+DVG S S   T+FLPHAP +V  +Q ++++G M
Sbjct:    4 NQCFCLACVRTNTVALVERCGKFQAIKGPGCQCLVWPVDSIVGRVSLRVRQLDVNCETKTKDNVFVNVVISVQYQVVLEKAFDAFYKLANPEIQIQAYVFDVVRSELPKMELDESFSNKEQLANEVKHHLDETMMSFGYSIIKALVTDISPDARVKMSMNEINASRRLREAAKEKAEADKIVQVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGSSGSGGKTLFLPHAPSAVGDLQDSLKNGLM 281          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: A0A7S2BRL8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRL8_9STRA)

HSP 1 Score: 333 bits (853), Expect = 3.730e-111
Identity = 175/274 (63.87%), Postives = 216/274 (78.83%), Query Frame = 1
Query:  136 CFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ 957
            C QC+  S++G+VERLGK+  L + G+N    PI+ +  K+S RVQ LDVR ETKT+DNVFV   VSVQYQ  K+KIYDAFYRL++P  QIR+YV+D+VRS LP M LD+AF++KE +AL VK  L AVM EYG+ I+QALVTD+ PD +VK AMNEINASKRM+EAA+ KAEADK++ VKAAEA+AESKYLSGVGV+RQRKAIVDGLRDS++ FS  + GT+PKDV+DLLLLTQYFDML++VG     ATVFLP    S +A   +MRD  +Q
Sbjct:    7 CVQCIQTSEIGIVERLGKYDRLQNAGINFFCCPIEYLAGKVSLRVQALDVRCETKTEDNVFVEVNVSVQYQVQKDKIYDAFYRLSNPTQQIRAYVFDIVRSVLPAMPLDEAFEAKEHVALEVKKALSAVMDEYGFVIVQALVTDIAPDAKVKNAMNEINASKRMKEAASEKAEADKVLLVKAAEADAESKYLSGVGVARQRKAIVDGLRDSIKQFSGNVQGTTPKDVIDLLLLTQYFDMLKEVGNHEYTATVFLP----SESANGTSMRDSLLQ 276          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: A0A7S1V9W2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9W2_9STRA)

HSP 1 Score: 329 bits (844), Expect = 7.560e-110
Identity = 165/260 (63.46%), Postives = 213/260 (81.92%), Query Frame = 1
Query:  136 CFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQS 915
            CF  VS ++VGVVER GKF+ L  PGLNC++ P++V+V ++S RVQQLDVR+ETKT DNVF+TAVVSVQYQ ++EK+YDAFY LT+P  QI ++VYDVVRS LP ++LD  F++KE++ALAVK+ L   M  YGYQILQ L+TD+DPD RVK AMNEIN+SKR++ A   +AE DKI+QVKAAEAE+E+KYLSGVGV++QRKAIVDGL++S+  FS+ ++G+S K VMDLLLLTQYFDM+RDVG ++   T F+P +  S
Sbjct:    5 CFFTVSTAEVGVVERFGKFSRLVQPGLNCVVCPVEVLVGRLSFRVQQLDVRVETKTLDNVFITAVVSVQYQILREKVYDAFYALTNPTQQITAHVYDVVRSELPLLELDAVFEAKEELALAVKNALSETMGAYGYQILQTLITDLDPDNRVKAAMNEINSSKRLKFAVAERAEGDKILQVKAAEAESEAKYLSGVGVAKQRKAIVDGLKNSIVDFSQEVEGSSTKQVMDLLLLTQYFDMVRDVGAANHCRTTFVPSSKSS 264          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: W7TM34_9STRA (Hypersensitive-induced response protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM34_9STRA)

HSP 1 Score: 327 bits (838), Expect = 6.590e-109
Identity = 165/279 (59.14%), Postives = 210/279 (75.27%), Query Frame = 1
Query:  121 PNMAFCFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ 957
            P    C QC+  S +G+ ER G F  +  PG+N I WPID +V ++S RVQQL     TKTKDNVFV   V VQYQ I  + YDA+Y+LTDP  QIRSYV D+VRST+PKM+LD AF++KE++A A++D L+  M  YGY I+Q+LV D+  D +VK AMNEINASKR+REAA  KAEADKI+QVKAAEA AESKYL+G+G++R+RKAIVDGLR SVE FS+T++G +PKDVMDL+LLTQYFDML+DVG +    T+F+ H P +V  ++  +R G MQ
Sbjct:    2 PFSCCCLQCIDTSTLGIQERFGNFVRILPPGMNLICWPIDNVVGRVSARVQQLVCDCGTKTKDNVFVAVQVIVQYQVIVSQAYDAYYKLTDPNLQIRSYVEDIVRSTVPKMELDMAFEAKEELAHAIRDSLQQTMGTYGYTIIQSLVLDIRVDEKVKTAMNEINASKRLREAAAEKAEADKIVQVKAAEASAESKYLNGMGIARERKAIVDGLRGSVEEFSETVEGATPKDVMDLILLTQYFDMLKDVGNNPTPTTLFMTHGPSAVTELKEQLRAGIMQ 280          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: A0A7S2PFY3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFY3_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.530e-107
Identity = 166/269 (61.71%), Postives = 213/269 (79.18%), Query Frame = 1
Query:  124 NMAFCFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQ 930
            N   CF+ V   Q+GVVE LG++T + +PG  CI WPI  +V  +S R+QQLDV  ETKTKDNVFV   V+VQY+ I EK YDA+YRL+DP+ Q+RSYV+DVVRST+P+M+LD+AF SKEDIA +V +QL  VM +YGY+I+++LVTD+ PD RVK +MNEINAS+R++EAA +KAEADK+ Q+KAAEAEAESKYLSG+GV+RQRKAIV+GL+DSV  FS+ ++G SPKDVMD+LLL+QYFD L  VG +S    + L H P  VA +Q
Sbjct:    4 NGCCCFRYVRTQQIGVVETLGQYTKMIAPGCTCIFWPIANVVGTLSLRIQQLDVYCETKTKDNVFVQVAVAVQYRVISEKAYDAYYRLSDPREQVRSYVFDVVRSTVPRMELDEAFASKEDIANSVMEQLTTVMSDYGYEIMESLVTDLSPDARVKASMNEINASRRLKEAAQHKAEADKVKQIKAAEAEAESKYLSGLGVARQRKAIVNGLQDSVGAFSEEVEGASPKDVMDILLLSQYFDTLSAVGANS----LILEHDPAVVAKLQ 268          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: A0A7S4NF76_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NF76_9STRA)

HSP 1 Score: 321 bits (822), Expect = 1.540e-106
Identity = 159/255 (62.35%), Postives = 205/255 (80.39%), Query Frame = 1
Query:  136 CFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP 900
            CF  +S S+VG++ER GK++ LA PGL C+  P DV+V ++S RVQQ+DVR+ETKT DNVF+TA VSVQYQ ++EK+++AFY LT+   QI S++YDV+R+ LP ++LD  F++KED+ALAVK+ L   M  YGYQILQAL+TD+DPD RVK AMNEIN+SKR++ A   +AE DKI++VK+AEAEAE+KYLSGVGV++QRKAIVDGLR S+  FS  + GTS KD+MDLLLLTQYFD +RDVGQ S   T F+P
Sbjct:    5 CFFTISTSEVGIIERFGKYSRLAHPGLGCVACPADVLVGRMSFRVQQIDVRVETKTLDNVFITATVSVQYQVLREKVFEAFYALTNAHQQITSHIYDVMRAQLPTLELDAVFEAKEDLALAVKNALSETMSLYGYQILQALITDLDPDQRVKNAMNEINSSKRLKFAVAERAEGDKILKVKSAEAEAEAKYLSGVGVAKQRKAIVDGLRTSIVDFSDGVKGTSSKDIMDLLLLTQYFDCIRDVGQESHCKTTFVP 259          
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Match: B7FWC4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWC4_PHATC)

HSP 1 Score: 318 bits (816), Expect = 1.940e-105
Identity = 164/274 (59.85%), Postives = 216/274 (78.83%), Query Frame = 1
Query:  136 CFQCVSNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPKMDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQ 957
            CFQCV   +V VVE LG+F  L  PGL+C+ WP+  IV +++ R+QQLDV  ETKT+DNVFV   V+VQY+ + E  YDAFYRLTDP+ QI+SYV+DVVRST+PKM+LD+AF SK+DIA AV +QL++VM EYGY+I   LVTD+ PD +VK +MNEINAS+R++EA+++KAEADK  QVKAAEA+AE++YLSG+GV+RQRKAIV+GL+ SV  FS  ++G  PKDVMD+LLL+QYFD L  VG +S    +FL H P +VAA+Q ++   F++
Sbjct:   14 CFQCVRTQEVAVVEDLGQFKRLLDPGLHCLCWPLVSIVGRLTLRIQQLDVVCETKTRDNVFVQVAVAVQYRVLAEAAYDAFYRLTDPRGQIQSYVFDVVRSTVPKMELDEAFASKDDIAKAVLEQLQSVMLEYGYEIRNTLVTDLSPDSKVKASMNEINASRRLKEASSHKAEADKTRQVKAAEADAEARYLSGLGVARQRKAIVEGLQASVSEFSSEVEGARPKDVMDILLLSQYFDTLSVVGANS----LFLEHDPATVAALQNSVGASFLK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12996.2365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDT1_ECTSI1.760e-17995.68PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBQ9_9PHAE3.180e-16988.85PHB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YL74_9STRA1.860e-13974.09Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A6S8S5L6_9STRA2.050e-11361.87Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2BRL8_9STRA3.730e-11163.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1V9W2_9STRA7.560e-11063.46Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
W7TM34_9STRA6.590e-10959.14Hypersensitive-induced response protein n=1 Tax=Na... [more]
A0A7S2PFY3_9STRA1.530e-10761.71Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4NF76_9STRA1.540e-10662.35Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
B7FWC4_PHATC1.940e-10559.85Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12996contigL-elsbetiae_contig12996:1273..4975 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score514.6
Seed ortholog evalue3.3e-143
Seed eggNOG ortholog2880.D8LDT1
Preferred nameHIR1
KEGG koko:K03129
KEGG Pathwayko03022,ko05016,ko05168,map03022,map05016,map05168
Hectar predicted targeting categorysignal peptide
GOsGO:0002239,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0008150,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0012505,GO:0016020,GO:0019899,GO:0019900,GO:0019901,GO:0030054,GO:0031090,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043424,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051704,GO:0051707,GO:0055044,GO:0071944,GO:0098588,GO:0098805
EggNOG free text desc.stress-induced mitochondrial fusion
EggNOG OGsCOG0330@1,KOG2620@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03036
Exons9
Model size958
Cds size957
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815479.542478-CDS-L-elsbetiae_contig12996:1273..14341622815479.542478-CDS-L-elsbetiae_contig12996:1273..1434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 1274..1434 -
1691682918.1746588-CDS-L-elsbetiae_contig12996:1273..14341691682918.1746588-CDS-L-elsbetiae_contig12996:1273..1434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 1274..1434 -
1622815479.5538633-CDS-L-elsbetiae_contig12996:1617..17411622815479.5538633-CDS-L-elsbetiae_contig12996:1617..1741Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 1618..1741 -
1691682918.1865757-CDS-L-elsbetiae_contig12996:1617..17411691682918.1865757-CDS-L-elsbetiae_contig12996:1617..1741Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 1618..1741 -
1622815479.6009927-CDS-L-elsbetiae_contig12996:2185..23741622815479.6009927-CDS-L-elsbetiae_contig12996:2185..2374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 2186..2374 -
1691682918.1973512-CDS-L-elsbetiae_contig12996:2185..23741691682918.1973512-CDS-L-elsbetiae_contig12996:2185..2374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 2186..2374 -
1622815479.6139681-CDS-L-elsbetiae_contig12996:2634..26811622815479.6139681-CDS-L-elsbetiae_contig12996:2634..2681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 2635..2681 -
1691682918.2070374-CDS-L-elsbetiae_contig12996:2634..26811691682918.2070374-CDS-L-elsbetiae_contig12996:2634..2681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 2635..2681 -
1622815479.625681-CDS-L-elsbetiae_contig12996:2893..29661622815479.625681-CDS-L-elsbetiae_contig12996:2893..2966Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 2894..2966 -
1691682918.2185023-CDS-L-elsbetiae_contig12996:2893..29661691682918.2185023-CDS-L-elsbetiae_contig12996:2893..2966Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 2894..2966 -
1622815479.6419783-CDS-L-elsbetiae_contig12996:3249..33121622815479.6419783-CDS-L-elsbetiae_contig12996:3249..3312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 3250..3312 -
1691682918.2279036-CDS-L-elsbetiae_contig12996:3249..33121691682918.2279036-CDS-L-elsbetiae_contig12996:3249..3312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 3250..3312 -
1622815479.6551836-CDS-L-elsbetiae_contig12996:3664..37211622815479.6551836-CDS-L-elsbetiae_contig12996:3664..3721Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 3665..3721 -
1691682918.2403584-CDS-L-elsbetiae_contig12996:3664..37211691682918.2403584-CDS-L-elsbetiae_contig12996:3664..3721Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 3665..3721 -
1622815479.6728578-CDS-L-elsbetiae_contig12996:4062..41891622815479.6728578-CDS-L-elsbetiae_contig12996:4062..4189Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 4063..4189 -
1691682918.2506137-CDS-L-elsbetiae_contig12996:4062..41891691682918.2506137-CDS-L-elsbetiae_contig12996:4062..4189Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 4063..4189 -
1622815479.6881056-CDS-L-elsbetiae_contig12996:4859..49751622815479.6881056-CDS-L-elsbetiae_contig12996:4859..4975Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 4860..4975 -
1691682918.270138-CDS-L-elsbetiae_contig12996:4859..49751691682918.270138-CDS-L-elsbetiae_contig12996:4859..4975Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12996 4860..4975 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12996.2365.1prot_L-elsbetiae_contig12996.2365.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12996 1274..4975 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12996.2365.1

>prot_L-elsbetiae_contig12996.2365.1 ID=prot_L-elsbetiae_contig12996.2365.1|Name=mRNA_L-elsbetiae_contig12996.2365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=319bp
RDTLAFAFNSLLYSSLRVYASTTARVYDTAGLARSSPSSAPNMAFCFQCV
SNSQVGVVERLGKFTGLASPGLNCILWPIDVIVAKISTRVQQLDVRMETK
TKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVYDVVRSTLPK
MDLDQAFDSKEDIALAVKDQLEAVMKEYGYQILQALVTDMDPDPRVKEAM
NEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIV
DGLRDSVETFSKTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLP
HAPQSVAAIQAAMRDGFMQ
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mRNA from alignment at L-elsbetiae_contig12996:1273..4975-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12996.2365.1 ID=mRNA_L-elsbetiae_contig12996.2365.1|Name=mRNA_L-elsbetiae_contig12996.2365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3703bp|location=Sequence derived from alignment at L-elsbetiae_contig12996:1273..4975- (Laminarionema elsbetiae ELsaHSoW15)
AGAGATACACTGGCTTTTGCTTTCAACTCTTTGCTGTACAGCTCGCTTAG AGTTTACGCAAGTACCACGGCTCGTGTCTACGACACCGCGGGGTTGGCGA GGTCGAGCCCTTCCAGGTAAGACTTTAGTCTCTGGGTCCTTTTGTGTTCC ATAGCAGTCAAGTGATCATATTCTAGGAGGATACATGCCTGACATCTACG TTCCCCCAGATCTCGGACGATAATTACACAGCGCTATTGAATATACCGGG GGTCTGCCTTACTTACTGTTGGTCTTGGCACGCCAAGTCCGGCCACCATT TGGCATGAACTCAGTCCTTGCGTGTGTGAAAGTTGCTCCACCATAATATC TAGATACATTAGATAAGCACCCAGACCACAGTTGGTTGCGCGGCATAAAA CTAAAACGGCTACATATGTGCCAGCTGTGGTTGGTGGCACGCCATTTACA TTGTACATACATGCACGAATTCGTTCACTATTGAAGTTTGACAGGCAATA GACAGGTTCCTACATACTTTTTTTAAGTAAAGTCGAATCTTGTAGGTCTA GATAATGAATGTAGACTACATATATCCATATCTCTACATAGATATGTGGA CATGTACGTAGTACCCCTACAACATGGAAAATATACGGGTGCACTTCTCT GAAAGTCATGTATGTAATACACGAAGAGCGCGCCAGCATCCAAACAACCC GATCAATCAAAATAATAACGTTTTTGACTTATTCCCCCTCCACATTTACT GCGACTTTCTCCAAATCTAATGCCTTGTTCGTGCAGCGCGCCAAACATGG CCTTCTGCTTTCAGTGTGTCTCGAACTCTCAAGTTGGCGTCGTCGAGCGG CTGGGAAAGTTTACTGGACTGGCGAGCCCTGGACTAAACTGCATTCTTTG GCCTATCGACGTCGTAAGTGAATAGTCTATTTATGGTAGGCTTCAGCAGA CATGCCACACTCGAGGGGACCATGCACAAATTTCTAGAGCCAAACAGATG CCACGCGTGTTGCAACTGACAATACTATTGACGAACGAACATATGTAGAT GATCATTATTCTGTAGAAAATATTTATTCTGGGCTTGCCTGTGTCGACAG ATGTCTGGTGCATCAAATGCGATAAGAGATAAGTTACGTACGTACGTACG TATTTTTTCATACACATATCATGCTGCAATACTTTTGACTTTCCCAGATG GCCATTGAGCTTACTGACGTCAACACTTAATTTTATCATTCAAACCGGGT ACAGATTGTCGCGAAAATTTCAACGCGCGTTCAGCAGCTAGACGTTCGAA TGGAAACCAAGGTAAGATCGGTCGAACAGATTCCTCCTTCGACCGTATTG TAGCAAATCGCATCTTAAAAGCAGTACATACACTTCTCTGCCAGTTGAAA GTACCACCAGTGGAAACGAAGTGCGCACGGTAAATGTTAACATTCTAAGG TAGAATTCTGCCAGTCTAAGTCTCTGCATAGGCACTGATCAGTGTAACGC GGCAAGTTTGCCGCTGTGGTAGATATATTTTCCAAATATCCCCTTATCTG ATTCCTATGGTTTGCTCCCCTCGCCCCCAGCCCGCTCCCACCTTCTGAGG GTTCTCTCTCTTGTCTGCATTGTATTGCGCTTGGCACCTGTCACGCTGTA TCTTGACATTCAGACGAAGGACAACGTGTTCGTCACGGCCGTTGTGTCGG TGCAGTACCAGCCCATCAAGGAAAAGGTCAGACCCATGAGTGCCCTGTAG AAGTACGAACATAGCAATAAACGACCCTTGTTTCCTCCCAAACAGTGGCG ACCTTGATGAGTGCCCTGTTACTGCTGCTGCCTTTTCTAAGGGCGATGGT GGCGCGTCTTCGATCATGTTTCTGGTGTTGTTCTTGCTGTGTGTGCCGGA GTGTGCATATCTATATATGTGCCATCAGCAATAACTTGTACCCACGTCAT CCTGTTGCCCCACCAACTTATTGTGCTTGTTGGCGTCTTCTCAACATCTC GTCTCGAAGATCTACGATGCGTTCTACCGGCTCACGGATCCACAGGCACA GATTCGTTCATACGTCTACGACGTTGTCAGGAGTGAGTTATGTACATAGT ATGGATGTAGCCTAATATAGGTGTCATTCTCTTGGTATTTTCCACCTCCA CTCCTCCCAACTTTCATCCGCTTACTCTGCTATCTTCTACCAATCTATGT ACAGCTATCATTGCCCCTGCAGCTTCAGTAAAGTCATTTTCTTCTCCGTC ATGAACATGGTTTATCTTCCACGTCGATCGTAACCTCTTTCCAGGCACCC TACCGAAGATGGACCTCGATCAGGCCTTCGACTCCAAGGAGGTATGGCTT GCTGGAGCCCATCGCTCAGATATATTTGGTGCAACTGGTTTATTGGGTGG TTTTGGGGTTTCAGTGACACAGTATAATATTGATGACGGCTGAAGTGCTC GGGTTTTAAAGTGCATCATTTATGATCGGTGCTACAACGCGGATCGATTC TGCAATCCCCCATACGGCTGTTGTAACAGAACATGCCACCTGGGTAATTC ACTTTTGAATCCCTGTTCACTTTGCGCTCTTTAAATCTTGGCGAGAAATA GGACATCGCTCTAGCCGTGAAAGATCAACTGGAAGCAGTGATGAAGGAGT ATGGATACCAGATCCTGCAGGCCCTCGTGACCGACATGGACCCGGACCCT CGTGTTAAGGAAGCCATGAACGAAATCAACGCTTCGAAGCGGATGAGAGA GGCGGCCACCAACAAGGCCGAGGCCGACAAGATCATGCAGGTCAGTTCGG TCATCATCGCGAATAGCTTGAATGTTTTATTTTTCGTGTGCATCGCCCTC GTGTCGACGGGGAGTAAGAACAGTACCTCCGCCCCCTCGCGACGGCATTC CCGTTGATCAATGTTGACCTGATGCAAGTTATTTCATAACGGTGCCGTGT TCTTGATTGGAGATCCTGAGAGAGGTCGCTCAAAATGTATCTTCGTTCAC AGCATGATGTACAATATGTTGTACACCTGACTAGAACTATCTATACGCCG CACATATATATATGTAGACTATCTACTAGTGCTCTGGGTATTTCATTCGC TCAAGCGCAGATACGCATGGGAGTCGTCTCGCATTACATAGTTTCGGTTG TTTTGTCGACGCACGGGAGGGTGAAGACAATGTAGGATCAGAGATTGATG CCGATGTTCACGACGACTAATTGAATCGCTGCAGGTCAAGGCGGCAGAGG CCGAGGCCGAATCCAAGTACCTGTCTGGCGTGGGTGTGTCAAGGCAGCGC AAGGCGATCGTCGACGGGCTCCGCGACTCCGTGGAGACCTTCTCGAAGAC AATCGACGGTACGCGCGTTTACCAGAGAATAGGGTATGGATCCGATTGCA ATAATACTGTTTGTTTTTTCGTTAGGACCTCCTGTGGCGGATCCAACACT CTCTCTTCGCTGTCGATCCGACACCTGGTCATCTGCAAGGTGTCTGTTGA TTTCACAACTGTTGTTTGGTGTGTCATGGCTCCTGTTTCAGGAACGTCTC CGAAGGACGTGATGGACCTCCTCCTCCTGACCCAGTACTTCGATATGCTG AGAGACGTGGGCCAATCATCTAGGGCGGCCACAGTGTTCCTGCCGCATGC TCCTCAAAGCGTGGCAGCGATCCAAGCAGCCATGCGCGACGGCTTCATGC AGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12996:1273..4975-

>mRNA_L-elsbetiae_contig12996.2365.1 ID=mRNA_L-elsbetiae_contig12996.2365.1|Name=mRNA_L-elsbetiae_contig12996.2365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1914bp|location=Sequence derived from alignment at L-elsbetiae_contig12996:1273..4975- (Laminarionema elsbetiae ELsaHSoW15)
AGAGATACACTGGCTTTTGCTTTCAACTCTTTGCTGTACAGCTCGCTTAG
AGTTTACGCAAGTACCACGGCTCGTGTCTACGACACCGCGGGGTTGGCGA
GGTCGAGCCCTTCCAGAGAGATACACTGGCTTTTGCTTTCAACTCTTTGC
TGTACAGCTCGCTTAGAGTTTACGCAAGTACCACGGCTCGTGTCTACGAC
ACCGCGGGGTTGGCGAGGTCGAGCCCTTCCAGCGCGCCAAACATGGCCTT
CTGCTTTCAGTGTGTCTCGAACTCTCAAGTTGGCGTCGTCGAGCGGCTGG
GAAAGTTTACTGGACTGGCGAGCCCTGGACTAAACTGCATTCTTTGGCCT
ATCGACGTCCGCGCCAAACATGGCCTTCTGCTTTCAGTGTGTCTCGAACT
CTCAAGTTGGCGTCGTCGAGCGGCTGGGAAAGTTTACTGGACTGGCGAGC
CCTGGACTAAACTGCATTCTTTGGCCTATCGACGTCATTGTCGCGAAAAT
TTCAACGCGCGTTCAGCAGCTAGACGTTCGAATGGAAACCAAGATTGTCG
CGAAAATTTCAACGCGCGTTCAGCAGCTAGACGTTCGAATGGAAACCAAG
ACGAAGGACAACGTGTTCGTCACGGCCGTTGTGTCGGTGCAGTACCAGCC
CATCAAGGAAAAGACGAAGGACAACGTGTTCGTCACGGCCGTTGTGTCGG
TGCAGTACCAGCCCATCAAGGAAAAGATCTACGATGCGTTCTACCGGCTC
ACGGATCCACAGGCACAGATTCGTTCATACGTCTACGACGTTGTCAGGAA
TCTACGATGCGTTCTACCGGCTCACGGATCCACAGGCACAGATTCGTTCA
TACGTCTACGACGTTGTCAGGAGCACCCTACCGAAGATGGACCTCGATCA
GGCCTTCGACTCCAAGGAGGCACCCTACCGAAGATGGACCTCGATCAGGC
CTTCGACTCCAAGGAGGACATCGCTCTAGCCGTGAAAGATCAACTGGAAG
CAGTGATGAAGGAGTATGGATACCAGATCCTGCAGGCCCTCGTGACCGAC
ATGGACCCGGACCCTCGTGTTAAGGAAGCCATGAACGAAATCAACGCTTC
GAAGCGGATGAGAGAGGCGGCCACCAACAAGGCCGAGGCCGACAAGATCA
TGCAGGACATCGCTCTAGCCGTGAAAGATCAACTGGAAGCAGTGATGAAG
GAGTATGGATACCAGATCCTGCAGGCCCTCGTGACCGACATGGACCCGGA
CCCTCGTGTTAAGGAAGCCATGAACGAAATCAACGCTTCGAAGCGGATGA
GAGAGGCGGCCACCAACAAGGCCGAGGCCGACAAGATCATGCAGGTCAAG
GCGGCAGAGGCCGAGGCCGAATCCAAGTACCTGTCTGGCGTGGGTGTGTC
AAGGCAGCGCAAGGCGATCGTCGACGGGCTCCGCGACTCCGTGGAGACCT
TCTCGAAGACAATCGACGGTCAAGGCGGCAGAGGCCGAGGCCGAATCCAA
GTACCTGTCTGGCGTGGGTGTGTCAAGGCAGCGCAAGGCGATCGTCGACG
GGCTCCGCGACTCCGTGGAGACCTTCTCGAAGACAATCGACGGAACGTCT
CCGAAGGACGTGATGGACCTCCTCCTCCTGACCCAGTACTTCGATATGCT
GAGAGACGTGGGCCAATCATCTAGGGCGGCCACAGTGTTCCTGCCGCATG
CTCCTCAAAGCGTGGCAGCGATCCAAGCAGCCATGCGCGACGGCTTCATG
CAGGAACGTCTCCGAAGGACGTGATGGACCTCCTCCTCCTGACCCAGTAC
TTCGATATGCTGAGAGACGTGGGCCAATCATCTAGGGCGGCCACAGTGTT
CCTGCCGCATGCTCCTCAAAGCGTGGCAGCGATCCAAGCAGCCATGCGCG
ACGGCTTCATGCAG
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