mRNA_L-elsbetiae_contig12728.2196.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 371 bits (953), Expect = 2.160e-113 Identity = 295/481 (61.33%), Postives = 311/481 (64.66%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATPRVAAALQRDRAAERLAVFGSGXXXXXXXXXXXXXXXRXXXXXXIXXXXXXGWPSSAVFSSGSGVAVSARMPPLXXXXXXXXXXXXXXSAGPGVKSDEPRSAPVGGGKGLWWGRGPAGAXXXXXXXKSGGSSPTEAAPLSTAPSLPAEWLGEMAKAAGKGNGAAGGESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGD---FGVASPPP-SAGSGSPSGAQSPGGGPSRPLATAGLPAEGGGGGVAHEGGGAAGYDRQKAPTAVDRVIEDVVTRAFLATDEEFLTTASKPSSGSTATTAMVLGDRFYGFNVGDSRTILCRAGRAEVVS 1431 LVGPYA+SRRL+LSDHILIGRTGFSINR+DWGVWEDRGARR+MEDKSVVIQDM VESLTSLGLGPQTFLAVYDGHGGGEAS FLWQRLHVAIAEALED+ R+ ALQ+DRAAERLA FGS GW SAVFSS +G PP ++G G + DEPRS G+G G G SSP + L TAPSLP EWL G XXXXXXXXXXXXXXXXXX XXXXX XXXXXXXXXXXXXXXXXX GD FGVAS PP +GSG SGAQSPGGGPSRPLA+AGLPAEGGGG VA EG +QKAPTAVDRVIEDVVT AFLATDEEFLTTASKPSSGSTATTAMVLGDRFYGFNVGDSRTILCRAGRAEVVS Sbjct: 561 LVGPYANSRRLQLSDHILIGRTGFSINRYDWGVWEDRGARRSMEDKSVVIQDMGVESLTSLGLGPQTFLAVYDGHGGGEASTFLWQRLHVAIAEALEDSASRIEEALQQDRAAERLATFGSSGGGGQATRCDDWDGDATTPAGG-------GWTPSAVFSSSNG----GPTPPNPSVESLLHALAMAAASGAGSE-DEPRSGDAFAGRGELR----LGCDTAPACMGFGESSPRRPSVLPTAPSLPPEWL-------------FGAREVVANAACSDEXXXXXXXXXXXXXXXXXXNAPSRSGAASDTGSEGEAAXXXXXDAASGVRTEXXXXXXXXXXXXXXXXXXTGGDEETFGVASKPPLPSGSGRQSGAQSPGGGPSRPLASAGLPAEGGGGAVAREG-----MAKQKAPTAVDRVIEDVVTAAFLATDEEFLTTASKPSSGSTATTAMVLGDRFYGFNVGDSRTILCRAGRAEVVS 1007
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A7S4DEC0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEC0_HETAK) HSP 1 Score: 138 bits (348), Expect = 1.620e-33 Identity = 65/106 (61.32%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATPRVAAA 318 LVGPYA+S +L SDHIL+GRTGFSINRFD+GV E+ G R MEDKS++IQD+ +E L LG+GPQ+F+AVYDGHGG AS +LW+ LH+ ++EALE + AA Sbjct: 78 LVGPYANSYKLTFSDHILVGRTGFSINRFDYGVSEEIGRRPNMEDKSIIIQDLGIEHLYQLGMGPQSFVAVYDGHGGAHASNYLWRHLHLNVSEALEKVGQEIQAA 183
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: D7FNP4_ECTSI (Putative serine/threonine phosphatase 2C ptc2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP4_ECTSI) HSP 1 Score: 127 bits (320), Expect = 1.880e-29 Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHV--AIAEA 285 +VGPY S RRL L DH+L+GRTGFS+NRFD+G+ E GAR TMED+S+VIQD+A+ L L PQTF AVYDGHGGG+AS +LW LH AI+EA Sbjct: 55 MVGPYVSHRRLALGDHLLVGRTGFSVNRFDYGISERMGARPTMEDRSIVIQDLALPGLEGTYLWPQTFTAVYDGHGGGQASEYLWGNLHTKEAISEA 151
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A836CBM8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM8_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.450e-28 Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATPRVAAA 318 LVGPYA+ RL LSDH L+GRTGFS+NRFD+GV E G+R +MEDKS +IQDMAV LT L PQTF+ V+DGHGG +AS +LW LH+ +A++L+ ++AA Sbjct: 244 LVGPYANKYRLGLSDHFLVGRTGFSVNRFDYGVSERMGSRPSMEDKSTIIQDMAVAGLTGTHLWPQTFVGVFDGHGGAQASEYLWDNLHLRLADSLQARAGELSAA 349
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A6H5LAB3_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB3_9PHAE) HSP 1 Score: 129 bits (324), Expect = 2.920e-28 Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATPRV 309 +VGPY S RR+ L DH+L+GRTGFS+NRFD+G+ E GAR TMED+S+VIQD+A+ L L PQTF AVYDGHGGG+AS +LW LH + +L + R+ Sbjct: 571 MVGPYVSHRRMSLGDHLLVGRTGFSVNRFDYGISERMGARPTMEDRSIVIQDLALPGLEGTYLWPQTFAAVYDGHGGGQASEYLWGNLHTKVTSSLASRSKRL 673
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A7S2FV88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.510e-26 Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLG-LGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATP 303 LVGPYA L L+DHIL+GRTGFS+NRFD+G+ E+ G RR+MEDKS+++QDM V L++L PQT++ +YDGHGG EAS FLWQ+LH + +L P Sbjct: 183 LVGPYAGRYPLHLNDHILVGRTGFSVNRFDFGISEETGMRRSMEDKSIMVQDMRVPELSALAPYSPQTWMGIYDGHGGTEASHFLWQQLHENVKNSLAMVAP 284
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: W7U755_9STRA (Protein phosphatase 1b2 53 kDa isoform n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U755_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.240e-25 Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALE 291 L GPYA + L L D I++GRTGFSINR+D+G+ E+RG R+TMED ++VIQD+ V +L GL PQTF AV+DGHGG EASA+L LHV + E LE Sbjct: 668 LAGPYAKAYNLSLGDEIMVGRTGFSINRYDYGISEERGRRKTMEDHTLVIQDLGVRALKRFGLAPQTFAAVFDGHGGEEASAYLACHLHVNLREELE 764
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A7S2GBR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GBR9_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.830e-25 Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLG----LGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATPRVAAALQRD 330 LVGPYA L ++DHIL+GRTGFSINR+D+ V E+ G R+TMEDKS+++QDM +++L L PQT++AVYDGHGG +AS FLW+ LH A+ +L P + AA + Sbjct: 193 LVGPYAGRYPLHVNDHILVGRTGFSINRYDFAVSEEMGMRKTMEDKSIMVQDMKIDALNELDAMMHFTPQTWMAVYDGHGGTQASQFLWKELHDAVVASLAIRGPLLVAAADEE 306
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A482RP31_9ARCH (FHA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RP31_9ARCH) HSP 1 Score: 108 bits (269), Expect = 4.740e-23 Identity = 50/103 (48.54%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATPRV 309 LVGPY +L L+DHILIGRTGFSINR+D+G+ E+ G R++MED ++Q + + L + L PQ+F V+DGHGG AS +L Q LH+ +A AL +++ + Sbjct: 77 LVGPYGGRYKLSLNDHILIGRTGFSINRYDYGLSEEMGYRQSMEDACTIVQHLNISPLNATELSPQSFFGVFDGHGGVSASHYLAQHLHINVAHALLNSSQEI 179
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Match: A0A7S1UBQ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBQ7_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.090e-22 Identity = 56/110 (50.91%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 1 LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIQDMAVESLTSLGLGPQTFLAVYDGHGGGEASAFLWQRLHVAIAEALEDATPRVAAALQRD 330 LVGPY RL LSDHIL+GRTGFS+NR+D+GV E+ G R++MED V+IQD+ + L + LGP F V+DGHGG SA+L LH +A ALE+ + A ++D Sbjct: 347 LVGPYRGLWRLSLSDHILVGRTGFSVNRYDFGVSEEMGRRQSMEDAHVLIQDLDLRRLNAGMLGPVFFAGVFDGHGGDATSAYLSAHLHANLARALEEEASTLVKAFKKD 456 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12728.2196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12728.2196.1 >prot_L-elsbetiae_contig12728.2196.1 ID=prot_L-elsbetiae_contig12728.2196.1|Name=mRNA_L-elsbetiae_contig12728.2196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=477bp LVGPYASSRRLELSDHILIGRTGFSINRFDWGVWEDRGARRTMEDKSVVIback to top mRNA from alignment at L-elsbetiae_contig12728:710..5265- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12728.2196.1 ID=mRNA_L-elsbetiae_contig12728.2196.1|Name=mRNA_L-elsbetiae_contig12728.2196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4556bp|location=Sequence derived from alignment at L-elsbetiae_contig12728:710..5265- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12728:710..5265- >mRNA_L-elsbetiae_contig12728.2196.1 ID=mRNA_L-elsbetiae_contig12728.2196.1|Name=mRNA_L-elsbetiae_contig12728.2196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2862bp|location=Sequence derived from alignment at L-elsbetiae_contig12728:710..5265- (Laminarionema elsbetiae ELsaHSoW15)back to top |