mRNA_L-elsbetiae_contig10168.219.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10168.219.1
Unique NamemRNA_L-elsbetiae_contig10168.219.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: D8LE72_ECTSI (FHA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE72_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 2.660e-98
Identity = 169/206 (82.04%), Postives = 177/206 (85.92%), Query Frame = 1 
Query:    1 VRAGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGD--SGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            V  GRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNK K+PPKEFHRL VGDV+KFGESTRLY LEGP+ELRPAEYESDNLRNLRLDAGRKQLAAKLAK++AG AGE        SGEYGISWGFDEDAVAEE               VELPDYLKTEAQKRRRRDTK+GLTED+VHKRDAKLFEKLQLKLTK+
Sbjct:  122 VLLGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKKKIPPKEFHRLHVGDVIKFGESTRLYALEGPEELRPAEYESDNLRNLRLDAGRKQLAAKLAKIKAGGAGEXXXXXXXXSGEYGISWGFDEDAVAEEXXXXXXXXXXXXX-XVELPDYLKTEAQKRRRRDTKIGLTEDNVHKRDAKLFEKLQLKLTKI 326
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BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: A0A836CFG3_9STRA (FHA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFG3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.820e-43
Identity = 106/229 (46.29%), Postives = 141/229 (61.57%), Query Frame = 1 
Query:   10 GRQQGVVDVLLEHPSISRKHAILQHGQ-NGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGE-YGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTK--------------------------VGLTEDSVHKRDAKLFEKLQLKLTKV 612
            GRQ G VD+ L+HPSISR+HA+LQ+G   G+L + D GSTHG  VNK ++ PK++ +L+VGDV+KFGESTRLYVL GP EL P EY+S+NL+  RL   +K + +KLA+        GK E D+ +  G SWGFDEDAV    + D  E    +E+  +LP+YLKTEAQK RR++ K                          VGL E+ V+ +D K F+ LQ KL K+
Sbjct:   43 GRQAGAVDIQLDHPSISRQHAVLQYGHAEGSLHVVDRGSTHGTFVNKQRLEPKKYVKLNVGDVIKFGESTRLYVLCGPAELMPPEYDSENLQKYRL---KKLVNSKLAEAGVKV---GKDEADAQQDTGASWGFDEDAV----ESDSGEGSDSEEDEEQLPEYLKTEAQKARRKELKSSITCQDRXXXXXXXXXXXXXXXXXXVGLKEEDVNAKDQKAFQNLQKKLQKI 261
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BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: M4B2V9_HYAAE (FHA domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2V9_HYAAE)

HSP 1 Score: 144 bits (364), Expect = 8.250e-37
Identity = 91/205 (44.39%), Postives = 124/205 (60.49%), Query Frame = 1 
Query:   10 GRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRD----TKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            GR + V DV + HPSISR HA+LQ  + GALFL+D  STHGC VNK +V  ++F RL +GDVL FGESTRLYV+ GP EL P EYES NL  LR   G+K+   + +K                E G+SWGF EDA  EEE E  EE +        LPDYL    ++++  D    + VG ++  +H++D +L+++LQ ++ K+
Sbjct:   47 GRMETVCDVAVAHPSISRVHAVLQFDEQGALFLYDTRSTHGCYVNKRRVSAEDFVRLHIGDVLVFGESTRLYVVCGPAELLPPEYESSNLTKLREKLGKKRSLQEDSKQLE-------------ERGVSWGFGEDAEDEEEGESDEEMDAAKTREA-LPDYLCNVRRRKKEDDQPYTSSVGPSQ--IHEKDQRLYQQLQTRIRKM 235
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BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: G4ZWG5_PHYSP (FHA domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZWG5_PHYSP)

HSP 1 Score: 138 bits (348), Expect = 4.500e-35
Identity = 89/204 (43.63%), Postives = 121/204 (59.31%), Query Frame = 1 
Query:    1 VRAGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            V AGR + V D+ L HPSISR HA LQ    GALFLFD  STHGC VNK +V  ++F RL +GDVL FGESTRLY + GP EL PAEYES NL   R    RK+   +  K                + G SWGF EDA  EE D++ +E +   +   ELPDYL+   ++   +  K  +++  V+++D +L+++LQ ++ K+
Sbjct:   44 VVAGRMKTVCDLPLAHPSISRVHAALQFDDKGALFLFDARSTHGCFVNKKRVVAEQFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLDRKRQILEKKKQE--------------DRGASWGFGEDAQEEEGDDESDEEDAA-KGKEELPDYLRN-LKEEEDQPYKSSVSQSQVNEKDQRLYQQLQTRIRKM 231
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BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: A0A484EAG2_BRELC (FHA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAG2_BRELC)

HSP 1 Score: 136 bits (342), Expect = 7.300e-34
Identity = 91/202 (45.05%), Postives = 121/202 (59.90%), Query Frame = 1 
Query:    7 AGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            AGR +GV D++L HPSISR HA+LQ  + GALFL+D  STHGC VNK ++P +EF RL +GDV+ FGES RLY + GP EL PAEYES NL   R     ++L  K+                  E G SWGF  DA    EDE+ EE E  D++  ELPDYL+   +      ++V  T   V+ +D +LF++LQ ++ K+
Sbjct:   46 AGRTEGVCDLVLAHPSISRTHAVLQFDEQGALFLYDMHSTHGCFVNKKRIPAEEFVRLHIGDVVGFGESMRLYAICGPPELLPAEYESLNLVKFR-----ERLETKVE-----------------ETGASWGFGNDA----EDEESEE-EILDDKMEELPDYLRNFKEDDLPYTSRV--TPSQVNAKDERLFQQLQTRIRKM 218
[Close]
BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: H3GIJ9_PHYRM (FHA domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIJ9_PHYRM)

HSP 1 Score: 137 bits (344), Expect = 1.040e-33
Identity = 93/204 (45.59%), Postives = 120/204 (58.82%), Query Frame = 1 
Query:    1 VRAGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            V AGR + V D+ L HPSISR HA LQ  + GALFL+D  STHGC VNK +V   EF RL +GDVL FGESTRLY + GP EL PAEYES NL   R    +K+   +  K               G  G SWGF EDA  EEEDE  EE+    E   +LPDYL+   ++  +  T   +++  V ++D +LF++LQ ++ K+
Sbjct:  391 VVAGRMETVCDLPLAHPSISRVHAALQFDEQGALFLYDMRSTHGCFVNKKRVLADEFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFRDRLEKKREVLEKNKQE-------------GNKGASWGFGEDA--EEEDESDEESPA--ESKEDLPDYLRNLKEEEDQPYTS-SVSQSQVREKDQRLFQQLQTRIRKM 576
[Close]
BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: A0A329RQU1_9STRA (FHA domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RQU1_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.730e-33
Identity = 88/204 (43.14%), Postives = 118/204 (57.84%), Query Frame = 1 
Query:    1 VRAGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            V AGR + V D+ L HPSISR HA LQ  + GALFL+D  STHGC VNK +V   EF RL +GDVL FGESTRLY + GP EL PAEYES NL   R    +K+  +K  +   GA               SWGF EDA  +E     +  +G +E    LPDYL+   ++   +  K  +++  V ++D KL+++LQ ++ K+
Sbjct:   44 VLAGRMETVCDLALAHPSISRTHAALQFDEQGALFLYDIHSTHGCFVNKKRVLADEFVRLHIGDVLGFGESTRLYAICGPPELLPAEYESLNLAKFRKKLAKKREISKEKQEERGA---------------SWGFGEDAEEDESAXXDDSVKGKEE----LPDYLRN-LKEEEDQPYKSSVSQSQVSEKDRKLYQQLQTRIRKM 227
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BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: A0A6G0RIF9_9STRA (FHA domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RIF9_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.790e-33
Identity = 91/205 (44.39%), Postives = 122/205 (59.51%), Query Frame = 1 
Query:    1 VRAGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEE-EDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            V AGR + V D+ L HPSISR HA LQ  + GALFL+D  STHGC VNK +V  +EF RL +GDVL FGESTRLY + GP EL PAEYES NL   R    RK+   +  K                + G SWGF +DA  EE E  D +++  G+EE   LPDYL+   ++   +  K  ++E  V ++D +L+++LQ ++ K+
Sbjct:   44 VVAGRMETVCDLPLAHPSISRVHAALQFDEQGALFLYDARSTHGCFVNKKRVVAQEFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLDRKREILEEKKQVE-------------DRGASWGFGDDAEEEEGEQSDEDDSVKGEEE---LPDYLRN-LKEEEDQPYKSSVSESQVSEKDQRLYQQLQTRIRKM 231
[Close]
BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: A0A2P4Y619_9STRA (FHA domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y619_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.320e-33
Identity = 89/204 (43.63%), Postives = 119/204 (58.33%), Query Frame = 1 
Query:    1 VRAGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDAGRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTKV 612
            V AGR + V D+ L HPSISR HA LQ  + GALFL+D  STHGC +NK +V  +EF RL +GDVL FGESTRLY + GP EL PAEYES NL   R    +K+   +  K                E G SWGF EDA  EE DE+ E  E  ++    LPDYL+   + +     K  +++  V ++D +L+++LQ ++ K+
Sbjct:   44 VVAGRMETVCDLALAHPSISRVHAALQFDEQGALFLYDICSTHGCFINKKRVLAEEFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLEKKREIREKKKEEI-------------EQGASWGFGEDA--EESDEEDEIVENKED----LPDYLRNVKEDQ---PYKSSVSQSDVKEKDQRLYQQLQTRIRKM 225
[Close]
BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Match: A0A7S2RXC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXC8_9STRA)

HSP 1 Score: 134 bits (337), Expect = 7.900e-33
Identity = 94/207 (45.41%), Postives = 122/207 (58.94%), Query Frame = 1 
Query:   10 GRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKTKVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLR--LDAGRKQLAAKLAKL-----RAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEETEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLKLTK 609
            GR   V D++LEHPSISR HA+LQ  +NG L+L+D  STHG  VNK KV    F +L  GDV+ FGESTRLY+L GP++ RP E ES+NLR +R  L+  R++  AKLA       +A A    +   +    GISWG  +   A E+DE+G E         ELPDYLK + Q+ +   T +G  E   H RD KL+ KL  K+ K
Sbjct:  109 GRAGDVSDIVLEHPSISRAHAVLQFNRNGTLWLYDLNSTHGTRVNKRKVSGGAFEQLRPGDVVSFGESTRLYLLNGPEQQRPPEMESENLRKMREKLNNRRERREAKLAAAMTSDAQALAQVMQEKNKEVERDGISWGMQD---APEDDEEGAEMN-----EEELPDYLKGKEQRYKEHATSLGQGE--FHSRDEKLWSKLHQKVGK 305
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10168.219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE72_ECTSI2.660e-9882.04FHA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CFG3_9STRA2.820e-4346.29FHA domain-containing protein n=1 Tax=Tribonema mi... [more]
M4B2V9_HYAAE8.250e-3744.39FHA domain-containing protein n=1 Tax=Hyaloperonos... [more]
G4ZWG5_PHYSP4.500e-3543.63FHA domain-containing protein n=1 Tax=Phytophthora... [more]
A0A484EAG2_BRELC7.300e-3445.05FHA domain-containing protein n=1 Tax=Bremia lactu... [more]
H3GIJ9_PHYRM1.040e-3345.59FHA domain-containing protein n=1 Tax=Phytophthora... [more]
A0A329RQU1_9STRA1.730e-3343.14FHA domain-containing protein n=2 Tax=Phytophthora... [more]
A0A6G0RIF9_9STRA1.790e-3344.39FHA domain-containing protein n=5 Tax=Phytophthora... [more]
A0A2P4Y619_9STRA3.320e-3343.63FHA domain-containing protein n=2 Tax=Phytophthora... [more]
A0A7S2RXC8_9STRA7.900e-3345.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10168contigL-elsbetiae_contig10168:1534..6656 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue4.2e-83
Seed eggNOG ortholog2880.D8LE72
Preferred nameSLC4A1AP
KEGG koko:K06091,ko:K08956
KEGG Pathwayko04390,ko04391,ko04530,ko05165,map04390,map04391,map04530,map05165
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005886,GO:0016020,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0071944,GO:0097159,GO:1901363
EggNOG free text desc.Solute carrier family 4 (anion exchanger), member 1, adaptor protein
EggNOG OGsKOG1881@1,KOG1881@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110
Ec32 ortholog descriptionForkhead-associated (FHA) domain
Ec32 orthologEc-00_001160.1
Exons6
Model size612
Cds size612
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10168.219.1prot_L-elsbetiae_contig10168.219.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10168 1534..6656 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815247.829157-CDS-L-elsbetiae_contig10168:1533..16271622815247.829157-CDS-L-elsbetiae_contig10168:1533..1627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 1534..1627 +
1691682794.4346442-CDS-L-elsbetiae_contig10168:1533..16271691682794.4346442-CDS-L-elsbetiae_contig10168:1533..1627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 1534..1627 +
1622815247.8470724-CDS-L-elsbetiae_contig10168:3180..32511622815247.8470724-CDS-L-elsbetiae_contig10168:3180..3251Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 3181..3251 +
1691682794.4482193-CDS-L-elsbetiae_contig10168:3180..32511691682794.4482193-CDS-L-elsbetiae_contig10168:3180..3251Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 3181..3251 +
1622815247.857361-CDS-L-elsbetiae_contig10168:3787..39011622815247.857361-CDS-L-elsbetiae_contig10168:3787..3901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 3788..3901 +
1691682794.4576037-CDS-L-elsbetiae_contig10168:3787..39011691682794.4576037-CDS-L-elsbetiae_contig10168:3787..3901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 3788..3901 +
1622815247.8708591-CDS-L-elsbetiae_contig10168:4802..49971622815247.8708591-CDS-L-elsbetiae_contig10168:4802..4997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 4803..4997 +
1691682794.4664876-CDS-L-elsbetiae_contig10168:4802..49971691682794.4664876-CDS-L-elsbetiae_contig10168:4802..4997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 4803..4997 +
1622815247.8819036-CDS-L-elsbetiae_contig10168:5621..56801622815247.8819036-CDS-L-elsbetiae_contig10168:5621..5680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 5622..5680 +
1691682794.475671-CDS-L-elsbetiae_contig10168:5621..56801691682794.475671-CDS-L-elsbetiae_contig10168:5621..5680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 5622..5680 +
1622815247.8933845-CDS-L-elsbetiae_contig10168:6577..66561622815247.8933845-CDS-L-elsbetiae_contig10168:6577..6656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 6578..6656 +
1691682794.4871173-CDS-L-elsbetiae_contig10168:6577..66561691682794.4871173-CDS-L-elsbetiae_contig10168:6577..6656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10168 6578..6656 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10168.219.1

>prot_L-elsbetiae_contig10168.219.1 ID=prot_L-elsbetiae_contig10168.219.1|Name=mRNA_L-elsbetiae_contig10168.219.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp
VRAGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKT
KVPPKEFHRLSVGDVLKFGESTRLYVLEGPDELRPAEYESDNLRNLRLDA
GRKQLAAKLAKLRAGAAGEGKGEGDSGEYGISWGFDEDAVAEEEDEDGEE
TEGGDEEAVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDAKLFEKLQLK
LTKV
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mRNA from alignment at L-elsbetiae_contig10168:1534..6656+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10168.219.1 ID=mRNA_L-elsbetiae_contig10168.219.1|Name=mRNA_L-elsbetiae_contig10168.219.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5123bp|location=Sequence derived from alignment at L-elsbetiae_contig10168:1534..6656+ (Laminarionema elsbetiae ELsaHSoW15)
GTACGAGCAGGAAGGCAGCAGGGCGTCGTGGATGTGCTGCTGGAACACCC
GTCTATCTCGAGGAAGCACGCCATTCTCCAGCACGGACAGAATGGTGAGA
TAATAAGGAAGGGACGAGAGTTTTATGGCACGGTGGGGTCGCGTCTTCGA
GCGCGTCTTGAGACATCGGGCTTTCCCTGCCGTGTTTCGATGAGGCTGAA
GTATTGATCGTGACACTGCCTTCTGCTGCTGCAAACTACTTTCTACCTAC
TTGGGGGGCACGTAATAATAATAGGCGCGGCCGGCGTGTAGGCAATAGTG
TAGGTACATGCGGCGATGTTGGTTCTTCAAAGCACGAGGAACCTCGATGG
GTTAGTTAGCCACTGCTGCTGCGCGTCAGTCGTACACGACACTTTCACAA
CAAGTTTTCTGCTTGACGTCAGCCGTCTGCACGGGTCCAGCCTGTTGAAA
AACGTCTTTCCAGGACACAGTAGTAGTTTCGGTGCAGTGTTATTAGGAAT
TGTTTTCAAGGAGGCACAGAAATGAGCTCTTTCTTGACAAGTGCTCGCAG
CTGAATGCAGATTTTGCAACGCAGCAAGCTCAGACTTGAAGCTCTGATAC
CTGTCGAATGTTGAGCAAGAAGAACCAAGCGAATCGATGCTCAAGTGGTG
GAGTACGAACGATTTGGGGCGTCAACAAACTGCTGGAGTGGCCCTGCAGA
CGAAAACACGCAAAAAAAAAGACCCCCTACCAAAAGCCCCGCCCTGTCGA
GGCATACGCTCGCACCGGCGCGCCAGCCCTTGTAGCGCACAATATCCATC
CCAGATGAAACAAACCAAAGGGGGGGGATATCCACTACTCATGACTAGCG
TCGTTGCGGGTTTCAGACGCTGAATCGCTCTGTGAGCGTCAAATCAGAGT
TGCCTTCGAACACGCACGGAGGGGGTCAGCGAGGCCAGCACCAGTAGGTA
GCAGCAGCTGTCGTTAGTGCCCTACAAGACGGCTGTCGGTATTGGCAAGT
GTTCTACACACCTGGGACCGTATACTTTCCGATGTGTATAGTTTCCTCGT
GGATGGGTGCTATCTGACCCTGCCCCCAAACCACCCAAAATGGTGCTGTG
GATCGGCGGACTGGCTCTCTCTCTCTCGTCCGAGCTCTTCCAGTCCAGTA
CGAATGTCAAGCGATGCTGAGAGTTATTGCCCTGCAAGAATTGACGCCTA
ATTCTTTGTCCTACTATGCAGCCAAGGACCTTATCAACATTTCCTCTGAC
TCCTGGCTTGGATGACTTTCTCCAAGCTGAGCTTTCGACCTCTCCGTATC
TTCCTACACTGAAGATCTGTGTTTTTTTACGTCCCAGGAAGTCCCTCCTT
AAAACCCCAATCCCGTATGCGCCCCCTTGAAAGCCGAGTTCCAATAACAC
TGGGTGGTGTCATGCCTTGGCTGCGGCGGCACGAAGACGTATCCTGTCGG
GGGGAGAGGGGGCGGGGGTTCCCTATGCGTTTACTCTGCATCTACTCCTT
ATTACGGGCGGGGTGTTCGTGCGAGTTTGGTGAGCCGCCTCTTTGCATTA
AATCGCATGCTCTCGGCTTGGCGCCCCCCCCCGTGTCTGGCGTATGTATG
TACCGCACCTACCTATGTGCCTCCCTTTCGTCTTCTCTCGCTCGCAGGGG
CTCTGTTTCTCTTCGACAACGGCAGCACCCACGGCTGCAGCGTCAACAAG
ACAAAGGTCCCTCCGAAGGTACCGCCTGACTGCCTAGGTGCTGCTGCACC
CCCCCTTTCGCAGGGCAGATGCCCCGCTTTGTCCGCGAGGAAGCACCGCT
TTGGCCGCGAGGAACCACTGCTTTGGCGCGGACTTTTTTGTGCTTTTGGA
GTCAACGACGTCGTCGCGAAGACCATTTGGATTGGTTGCTTTGGCGGTGG
TGGCGCATCCTGCTCTTTTACGGACACGACTTTTTGTTTGGGGTTTTGGT
AAATAATTACACCAGCTGTCGGGCACGTTGTACAGGTCACAGCTATTTAA
TTGCTGTGTTTAATCCTCAGGTGCCAGCGTTGCTATTGACTCTACTACTG
ACTGTGCCCCCTTATTTTTGCCTCAACACGCTCACCCGCCGCGAACTTCT
GCAGCACGAGGCGGCGGTCAGGGTTTCTGTTCTCTTGTTTGCGCGCCGTC
ATCGGCGTGTAACCCGCGACGGTTGCGTTGAGTTGCCGACACCGAGGAAC
CTCGCATCCTGTGTTGTATCCTGTGTTTTTTTTTTTTTCGTCTGTCTGTC
GCAGGAGTTCCACCGCCTCAGCGTCGGCGACGTGTTAAAGTTCGGAGAGT
CCACGCGGCTGTACGTGCTGGAAGGCCCGGACGAGCTGCGGCCAGCAGAA
TACGAGAGTGACAATCTTGTGAGTCCAACCGGCAGCAAGGACCGGCACTG
CGAACACACACCTCCGACCGACGGCGATCTAGGCTGCATTTTCCCCACTC
GCAAAGCGATCATACGCAATCCCCAAAGCAACGACTCGGTAGTGTGGCAG
CATGCACACCGCCACGTGCTATGAGCCTTCCTGCAATAGCCGGGGCCCCG
ATTCTCAAAAAGAGCGGGGGGGGCAGCGGGGGGGGGGGAGTATTTATCTA
GGAAATAGAGTGAAGAATCCCCCACAGTAGCCACTTTTTCAGAATTGGAG
GGCCCTGCTGCAGGAAGCCTATGTACATCCGAAACCGACGCCAGGGCTTG
AAGCACGGCGCCCCCAAGTGCTCCCAGGCTACTCACTACTACTGTGTGCA
CTTCTCCCGAACCAAGCGGTCTTTCAAGAAAATAAGTCTCTGGGGTGCCC
TAAGTTTGTAACCACACATAACACATGTATCTAGTACCCCCCCCCCCCCC
TCCCAAAGTCTCACAGCGATTGTCTTTCCGAAGGTTTGTATCCTGGCCTC
ACTCCCAGTTCGATTCGTTGTTCTCCTGTGAGCACCTCATAATGCACTAC
TGTAAATGGAGGGGGGGGAAACACGACGCGGTTACGAAGTGCCTGGTAGG
TAGCTATATAACCTAGCACCAGCAATAGGGGTGGGGTTGGTTTTGCAACA
ACGCGAACAGCAGCCTGACGAGGAAAGCTGGGCTTGGCCCGAGTCTCCCG
GCGCGGTGTGTGGCGATACCATATTTACACATGGTAACTTTCCGACCCAA
AGTTGACCTTTCGAACCCCCAAGTAAGCCGGTCGCTCGAACACCGAACAT
CGTCATTCCATTATCTTCGCTCCCCCCCCACACCTCCCCCCCCCCCCAAT
GAAAATGGAAATATTCAAGCGAAATTTACGGCTGGACGCCGGGAGGAAGC
AGCTGGCGGCGAAGCTGGCGAAGCTGAGAGCAGGCGCGGCTGGAGAGGGG
AAGGGGGAAGGGGATAGCGGGGAGTACGGCATCAGCTGGGGGTTCGACGA
GGACGCGGTGGCGGAGGAGGAAGACGAGGACGGCGAGGAGACGGAGGGGG
GCGATGAGGAGGCGGTGAGGGGATTCGTTTCGCTTGCCCCCCATCGCGTT
TAAATTTTTGTTTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CGTGTGCCTGCCTTTATCTGGTGTGGTTTGTGGCGTCTCTCTGCCTGCCT
GCCTGCCTGCCTGCCTGTCTGTCTGCCTGCCTCTCTGTCTGTTTTTCGCT
CTTTGGAGCGCTCAAAGTCTGTAACCTCATTGTTATTTAGTTATTTGTTT
TGTTCAACGGAACTGGGTTTGATTTCGCCACCATGGGTAAGGTGCCAGCA
TTTTTGTGTGTGTGTTTTTTTTCTTTGAAACGCTGTCGCTACAAAAAGAA
TCGCTCGGCTTTCCCTTCCCGATATCCCCGTTGCTGCTTGGCGTAGCGGT
ACGAGTAGGAAGTGCGAAACCCCCCGCAAACGCACCGAGACGTTTTCGCT
TGCCTCTGTGCTGCCATCGCTCACGCGTTATGCAATACCATCACGGCATG
ATGCCGCGCCCCCCCCCGTCTGCGCACACGAATCGATGCGTGCTTCCATT
TTGTCTCCGTACTGCCATCTCTCACGCACCTCTGTAGTTACCATCACGGC
ACGATATCACGTCGCCCCCCGGCCACCCCTCCCCGCAGGTGGAACTACCT
GACTACCTGAAAACGGAAGCTCAAAAGCGGCGAAGACGGGATACAAAGTG
AGTAGCTAGCAGCACAGGCAGTAAGGAGAGGGTTTTGTCGCTTTCAAGCG
CGAAGAACGGAGGGGGGGAAAGGCTGGACCGTTGCCATCTTAGTATCTGT
TCGATTTGTGGTGTCTAGGTACCTCCTGGTGTTGCCGTTTTGAAAGGCGG
TCGGTATTTCTGTGCGGCGGCATTCTGTTGGATTTGAGTACATTGGATGT
GGCATGGCCTAATGTGGAGCTGCCCGCTAGTACACCGCACGCGCAGCCAT
TCGGCGGGAGTTCCGTAGATATCATTCTCCGGGCATGCCCGACTCTGAAG
ATGGTATACAGAGAGCATCTATTGTTGCAGTGGCGGCAAATGCCTTGGGG
CGCAATCGAGACAGAAGTGGCATGGATATCGCGAAATAAATAAGTAGGCG
TTTTCTGTTGTCGCCACGCCGTCGTCGAAAGGGAAAGGCGTGCCCTAGTC
AGCGCCGTGTAACCGCTTGTGGCTGCTCTTTGAACAGGCGCGGACGGGAA
AGGAACGCCCCCCACGGCACTTAATTAGCCACGGGGGGTAAATTATCTCT
TGGTTGGTGGGACAGCGCATTCATCGTCCAGGCACCGGGGCGTCAAAACC
TTTTTTAATTAATGCATACAAATGTCAGCAGCCTACGTCCAGTCCGTGAA
AAAGTCGTTCCAGAGGGAACTCCTCGCGCACTTCGAATTTTCTGGGACGG
CGCGTTGGACCAATCAATCGTCCTGCGTTCAAGTATGTAGTGCAACGAAA
GGTTTCCAGCTTTACTTTGAAGAATCCCGCGAGGAGCATACGGTGCTGGT
ACATTCGCGAGCAACGCTTTTTATGTATGTTGCCGTAACCGTAATCCATA
AAATCCGTCACGTGCTTACCTCTTCCGCACTTTTTTTTTGCAAGGGTCGG
CCTGACGGAGGATAGCGTTCACAAGAGAGACGCGAAGCTGTTCGAAAAGC
TGCAGCTGAAGCTCACCAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10168:1534..6656+

>mRNA_L-elsbetiae_contig10168.219.1 ID=mRNA_L-elsbetiae_contig10168.219.1|Name=mRNA_L-elsbetiae_contig10168.219.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig10168:1534..6656+ (Laminarionema elsbetiae ELsaHSoW15)
GTACGAGCAGGAAGGCAGCAGGGCGTCGTGGATGTGCTGCTGGAACACCC
GTCTATCTCGAGGAAGCACGCCATTCTCCAGCACGGACAGAATGGTACGA
GCAGGAAGGCAGCAGGGCGTCGTGGATGTGCTGCTGGAACACCCGTCTAT
CTCGAGGAAGCACGCCATTCTCCAGCACGGACAGAATGGGGCTCTGTTTC
TCTTCGACAACGGCAGCACCCACGGCTGCAGCGTCAACAAGACAAAGGTC
CCTCCGAAGGGGCTCTGTTTCTCTTCGACAACGGCAGCACCCACGGCTGC
AGCGTCAACAAGACAAAGGTCCCTCCGAAGGAGTTCCACCGCCTCAGCGT
CGGCGACGTGTTAAAGTTCGGAGAGTCCACGCGGCTGTACGTGCTGGAAG
GCCCGGACGAGCTGCGGCCAGCAGAATACGAGAGTGACAATCTTGAGTTC
CACCGCCTCAGCGTCGGCGACGTGTTAAAGTTCGGAGAGTCCACGCGGCT
GTACGTGCTGGAAGGCCCGGACGAGCTGCGGCCAGCAGAATACGAGAGTG
ACAATCTTCGAAATTTACGGCTGGACGCCGGGAGGAAGCAGCTGGCGGCG
AAGCTGGCGAAGCTGAGAGCAGGCGCGGCTGGAGAGGGGAAGGGGGAAGG
GGATAGCGGGGAGTACGGCATCAGCTGGGGGTTCGACGAGGACGCGGTGG
CGGAGGAGGAAGACGAGGACGGCGAGGAGACGGAGGGGGGCGATGAGGAG
GCGCGAAATTTACGGCTGGACGCCGGGAGGAAGCAGCTGGCGGCGAAGCT
GGCGAAGCTGAGAGCAGGCGCGGCTGGAGAGGGGAAGGGGGAAGGGGATA
GCGGGGAGTACGGCATCAGCTGGGGGTTCGACGAGGACGCGGTGGCGGAG
GAGGAAGACGAGGACGGCGAGGAGACGGAGGGGGGCGATGAGGAGGCGGT
GGAACTACCTGACTACCTGAAAACGGAAGCTCAAAAGCGGCGAAGACGGG
ATACAAAGTGGAACTACCTGACTACCTGAAAACGGAAGCTCAAAAGCGGC
GAAGACGGGATACAAAGGTCGGCCTGACGGAGGATAGCGTTCACAAGAGA
GACGCGAAGCTGTTCGAAAAGCTGCAGCTGAAGCTCACCAAGGTGGGTCG
GCCTGACGGAGGATAGCGTTCACAAGAGAGACGCGAAGCTGTTCGAAAAG
CTGCAGCTGAAGCTCACCAAGGTG
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