mRNA_L-elsbetiae_contig12675.2155.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: D8LT51_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT51_ECTSI) HSP 1 Score: 230 bits (587), Expect = 3.330e-75 Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 1 Query: 1 MSTRKGAGTTRTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCCTKGRPRETSEGGE 336 MSTRKGAG TRTRKPKHQNTFAFRHNPKSQKTAKIL SVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTIT+AYHKIC PCARERRVCPWCCTKGRPRE++E GE Sbjct: 1 MSTRKGAGATRTRKPKHQNTFAFRHNPKSQKTAKILASVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITAAYHKICAPCARERRVCPWCCTKGRPRESTEDGE 112
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: A0A6H5JI96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI96_9PHAE) HSP 1 Score: 232 bits (592), Expect = 7.920e-75 Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1 Query: 1 MSTRKGAGTTRTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCCTKGRPRETSEGGE 336 MSTRKGAG TRTRKPKHQNTFAFRHNPKSQKTAKIL SVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTIT+AYHKICTPCARERRVCPWCCTKGRPRE++E GE Sbjct: 1 MSTRKGAGATRTRKPKHQNTFAFRHNPKSQKTAKILSSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITAAYHKICTPCARERRVCPWCCTKGRPRESTEDGE 112
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: A0A6V3DVU9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3DVU9_HETAK) HSP 1 Score: 137 bits (346), Expect = 5.020e-38 Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 1 Query: 1 MSTRKGAGTTRTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCC 297 MS+R+G + PKHQN FAF+HNP S+KT KIL N GLC C +K+EWRK+YRKY+PL QPA C C +KT+TSAYH C PCA++RR+C +CC Sbjct: 1 MSSRRGKSAAKKGAPKHQNEFAFKHNPNSKKTRKILAMPNVGLCRRCSEKIEWRKKYRKYKPLTQPAVCRFCKQKTVTSAYHSACKPCAKQRRICAFCC 99
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: A0A7S2BQ45_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQ45_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.850e-35 Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 37 RKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCCT 300 RKP HQN FAF HN S+ T KIL N GLC CHDK+EWRK+YRKY+PL+QP CN CH K + +AYH C PCA E+ +C WCCT Sbjct: 11 RKPAHQNEFAFVHNANSRLTKKILAMPNEGLCRRCHDKIEWRKKYRKYKPLKQPRKCNFCHNKAVKAAYHVACKPCAAEKSICAWCCT 98
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: A0A6A3LRT3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LRT3_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.540e-35 Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 1 Query: 1 MSTRKGAGTTRTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCC 297 MST++G + R PKHQN FAF+HNPKS+KT +IL GLC C +++EWRK+YRKY+PL QP +C CH+KT+TSAYH C PCA+ER +C CC Sbjct: 1 MSTQRG--NMKKRAPKHQNNFAFKHNPKSKKTERILSMPIHGLCEKCRNQIEWRKKYRKYKPLTQPGSCIHCHQKTVTSAYHSSCDPCAKERNICAKCC 97
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: W7TBG8_9STRA (Uncharacterized protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBG8_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.370e-35 Identity = 57/88 (64.77%), Postives = 67/88 (76.14%), Query Frame = 1 Query: 31 RTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWC 294 R R P HQNTFAFRHNPKS+KT +IL S GLC CH+KVEWRK+YRKY+PL PATC CH K++ +AYH+IC PCA +R VC C Sbjct: 19 RRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGC 106
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: A0A3R7MRP7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MRP7_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.460e-34 Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 22 GTTRTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCC 297 G + R PKHQNTFAF+HNPKS+KT +IL GLC C ++EWRK+YRKY+PL QP +C CH+KT+TSAYH C PCA+ER VC CC Sbjct: 29 GNVKKRAPKHQNTFAFKHNPKSKKTERILSMPIHGLCDKCLKQIEWRKKYRKYKPLSQPGSCIYCHQKTVTSAYHSACNPCAKERDVCAKCC 120
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: A0A485LR34_9STRA (Aste57867_24688 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR34_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.810e-34 Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 43 PKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCC 297 PK+QN+FAF+HNPKS+KT ILG GLC CHD++ WRK+YRKY+PL QP +C CH+KT+ SAYH +C PCARE+ VC CC Sbjct: 13 PKYQNSFAFKHNPKSKKTEHILGLPIHGLCPHCHDQIVWRKKYRKYKPLTQPGSCTSCHQKTVVSAYHVLCQPCAREKGVCAKCC 97
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: A0A5D6YPR8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YPR8_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.420e-34 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 43 PKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCC 297 PK+QNTFAF+HNPKS+KT +IL GLC C ++EWRK+YRKY+PL QPA+C CH+KT+TSAYH C PCARER +C CC Sbjct: 13 PKYQNTFAFKHNPKSKKTERILALPIYGLCEKCRKQIEWRKKYRKYKPLTQPASCIHCHQKTVTSAYHAACDPCARERDICAKCC 97
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Match: G4ZER0_PHYSP (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4ZER0_PHYSP) HSP 1 Score: 127 bits (319), Expect = 4.210e-34 Identity = 56/99 (56.57%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 1 MSTRKGAGTTRTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITSAYHKICTPCARERRVCPWCC 297 MST++G + R PKHQN FAF+HNPKS+KT +I+ GLC C ++EWRK+YRKY+PL QP +C CH+KT+TSAYH C PCA+ER +C CC Sbjct: 1 MSTQRG--NVKKRAPKHQNAFAFKHNPKSKKTERIMSMPIHGLCEKCRKQIEWRKKYRKYKPLTQPGSCIYCHQKTVTSAYHASCDPCAKERDICAKCC 97 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12675.2155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12675.2155.1 >prot_L-elsbetiae_contig12675.2155.1 ID=prot_L-elsbetiae_contig12675.2155.1|Name=mRNA_L-elsbetiae_contig12675.2155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp MSTRKGAGTTRTRKPKHQNTFAFRHNPKSQKTAKILGSVNAGLCASCHDKback to top mRNA from alignment at L-elsbetiae_contig12675:876..3165- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12675.2155.1 ID=mRNA_L-elsbetiae_contig12675.2155.1|Name=mRNA_L-elsbetiae_contig12675.2155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2290bp|location=Sequence derived from alignment at L-elsbetiae_contig12675:876..3165- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12675:876..3165- >mRNA_L-elsbetiae_contig12675.2155.1 ID=mRNA_L-elsbetiae_contig12675.2155.1|Name=mRNA_L-elsbetiae_contig12675.2155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig12675:876..3165- (Laminarionema elsbetiae ELsaHSoW15)back to top |