mRNA_L-elsbetiae_contig1258.2083.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1258.2083.1
Unique NamemRNA_L-elsbetiae_contig1258.2083.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: D8LFK4_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK4_ECTSI)

HSP 1 Score: 842 bits (2174), Expect = 8.690e-288
Identity = 506/911 (55.54%), Postives = 574/911 (63.01%), Query Frame = 1 
Query:   43 FSPALADKIRRQYRYIFTEVGVFDNSEIVDVMPGVMSTSLLYAQHRAVARGVEFLAKRPPVLVARLLRKMVPCFANSGDVLFLEHEVGGHWYLLRSGTISFYVSMSPLETQSEVRLMRSLSNDGHFGLAPVLLNVLNNETATATTAAELLTVRKDDLVDILRLWPEVMAELTIEAERHFQEVKTFRTTKQPARKVLRSPSPPPARPKPNAKTKDWRD-SPTKSIATNFSDSPDMYTAQPIALSEAVVGAATGGCNAGSEAFRARSFGDKMGSKGGE-------------SVFFKADESKETXXXXXXXXXXXXXXXXXXXXXXXEYAENVLGGISNIAGAVAKATSAVVEAAQRGMMPAAPEQLATVEETDDGDEEEGGKRSATTRADTLDRAGSSADKPSPVKNADSSSLRSQLLDKIDTIRGDEGDKDAGERERSGVQEEQRGVARQGAPAVAVADGIGPRESLRSTETVAGNVAATATPIVSPRRRAGELVRPPPIVTEDIPPILHTSVYKKMGRGGSSDSGDADEDLGQVRRCFVAKTFSPSDLGLGELRRGGDNEGGDAVPEEMTKASLMKDRRRRRTIHKGIPGIEGRRHTVDEVLGLDDPQAVLGSVPPERLFSMTGMFHPEAPVKVSWDLWLSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLLVLKIAVGNPNAATSTKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGLHTTSERNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            F PALADKIRRQYRYIFTEVGVFDNSEIVDVMPGV+STSLLYAQHRAVA+GV FL +RPPVLV RLLRKMVPCFAN GDVL+LEHEVGGHWY LR+GT+SFYVS+SPLETQSEV LMRSLS+DGHFGL PVLLNVLN+ETAT T AAELLT+RKDDL+DIL+ WPEVMAELTIEAER F+EVK FR  KQ A   L++ S         ++T++  + S  +S   N SD                                 ++ GD                      + F+ DESK+                              +G +S +                               ++  G+ E  G+R A                                          EG               +R V RQ   A   A GIG                     +V P                                               +RRCFVAKTFSPSDLGLG    G       + PE +TKASLMK +RRRRTI+KGI  I+GR+ +VDEVLGL D  A+LGSVPPERLFS+TGMFHPEAP+KVSWD+WLSMVIIWSVLEVTYRLGFDRP +GGW VLSY VDALFF DMLV+LRTAL++RDGEVVANQK+VAVAYLKGWF VDL+STVPWDLLVL+IAVGN NAATST+LVR    XXXXXXXXXX IPDFMEEWE+NSPLGPSSVKLGRLL++MAFSAH+NACIWYAAGLHT +E NWIADYYCS+D VS DCP+SK++FSLYLTSIYFAFTTMTTTGYGDILP+RLSV ELVVAI SEVLGAT+FAWVIGNLVNLVLN+DPAERNRKSMMNYLTEY+R
Sbjct:  413 FPPALADKIRRQYRYIFTEVGVFDNSEIVDVMPGVISTSLLYAQHRAVAKGVGFLRQRPPVLVGRLLRKMVPCFANCGDVLYLEHEVGGHWYFLRAGTVSFYVSVSPLETQSEVLLMRSLSDDGHFGLTPVLLNVLNSETATVTAAAELLTIRKDDLIDILQHWPEVMAELTIEAERLFKEVKKFRARKQSAGVKLQAFS---------SRTENTLNGSLAESARNNSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGGDXXXXXXXXXXXXXXXXXXXXXGMLFRGDESKQA---------------------------EAVGDVSAV-------------------------------DSSSGESEREGRREA------------------------------------------EGSXXXXXXXXXXXXXXERRVERQAEAAAMAAKGIG---------------------LVDPEH---------------------------------------------MRRCFVAKTFSPSDLGLGVSADGA------STPEAVTKASLMKAQRRRRTINKGITEIDGRKQSVDEVLGLSD--ALLGSVPPERLFSITGMFHPEAPIKVSWDIWLSMVIIWSVLEVTYRLGFDRPPEGGWQVLSYFVDALFFADMLVTLRTALLDRDGEVVANQKQVAVAYLKGWFTVDLISTVPWDLLVLQIAVGNANAATSTRLVRXXXXXXXXXXXXXXXIPDFMEEWEENSPLGPSSVKLGRLLVIMAFSAHVNACIWYAAGLHTAAEHNWIADYYCSDDGVSADCPSSKRAFSLYLTSIYFAFTTMTTTGYGDILPNRLSVMELVVAIGSEVLGATIFAWVIGNLVNLVLNLDPAERNRKSMMNYLTEYMR 1140
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: A0A6H5JXQ6_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ6_9PHAE)

HSP 1 Score: 394 bits (1013), Expect = 8.090e-124
Identity = 281/637 (44.11%), Postives = 323/637 (50.71%), Query Frame = 1 
Query:   43 FSPALADKIRRQYRYIFTEVGVFDNSEIVDVMPGVMSTSLLYAQHRAVARGVEFLAKRPPVLVARLLRKMVPCFANSGDVLFLEHEVGGHWYLLRSGTISFYVSMSPLETQSEVRLMRSLSNDGHFGLAPVLLNVLNNETATATTAAELLTVRKDDLVDILRLWPEVMAELTIEAERHFQEVKTFRTTKQPARKVLRSPSPPPARPKPNAKTKDWRDSPTKSIATNFSDSPDMYTAQPIALSEAVVGAATGGCNAGSEAFRARSFGDKMGSKGGESVFFKADESKETXXXXXXXXXXXXXXXXXXXXXXXEYAENVLGGISNIAGAVAKATSAVVEAAQRGMMPAAPEQLATVEETDDGDEEEGGKRSATTRADTLDRAGSSADKPSPVKNADSSSLRSQLLDKIDTIRGDEGDKDAGERERSGVQEEQRGVARQGAPAVAVADGIGPRESLRSTETVAGNVAATATPIVSPRRRAGELVRPPPIVTEDIPPI-LHTSVYKKM------GRGGSSDSGDADEDLGQVRRCFVAKTFSPSDLGLGELRRGGDNEGGDAVPEEMTKASLMKDRRRRRTIHKGIPGIEGRRHTVDEVLGLDDPQAVLGSVPPERLFSMTGMFHPEAPVKVSWDLWLSMVI 1932
            F PALADKIRRQYRYIFTEVGVFDNSEIVDVMPGVMSTSLLYAQHRAVA+GV FL +RPPVLV RLLRKMVPCFAN GDVL+LEHEVGGHWY LR+GTISFYVSMSPLETQSEV LMRSLS+DGHFGL PVLLNVLN+ETATAT AAELLT+RK DL+DIL+ WPEVMAELTIEAER F+EVK                                                           EAV   +T   ++G      R   +  G +G +                                                     KA +A +  A +G+                G +E                                 SLR      I  + G                EE  GV    A          P           G  A T  P+ + R RA + +RPPPIVT+D P I L  S  K            + D  D   D   +RRCFVAKTFSPSDLGLG    G       + PE +TKASLMK +RRRRTI+KGI  I+GR+ +VDEVLGL D  A+LGS+PPERLFS+TGMFHPEAP+K    LW+ M +
Sbjct:   74 FPPALADKIRRQYRYIFTEVGVFDNSEIVDVMPGVMSTSLLYAQHRAVAKGVGFLRQRPPVLVGRLLRKMVPCFANCGDVLYLEHEVGGHWYFLRAGTISFYVSMSPLETQSEVLLMRSLSDDGHFGLTPVLLNVLNSETATATAAAELLTIRKVDLIDILQHWPEVMAELTIEAERLFKEVKA----------------------------------------------------------EAVGDVSTDDSSSGELEREGRREAEGSGGEGSKXXXXXXXXXXRVAR---------------------------------------KAEAAAM--AGKGI----------------GFDE---------------------------------SLR------IPGVAG---------------AEEAAGVLHAAATTXXXXXXXXP---------TVGVAAGTTNPVEAARGRAAKKLRPPPIVTKDAPLISLDLSSEKTQDDDHNKNSNVAGDGNDMSADPEHMRRCFVAKTFSPSDLGLGVSADGA------STPEAVTKASLMKAQRRRRTINKGITEIDGRKQSVDEVLGLSD--ALLGSIPPERLFSITGMFHPEAPIK----LWVKMAL 520
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: A0A6H5JY39_9PHAE (Ion_trans_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY39_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 7.370e-57
Identity = 98/114 (85.96%), Postives = 108/114 (94.74%), Query Frame = 1 
Query: 2392 YAAGLHTTSERNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            YAAGLHT +E NWIADYYCSED VS +CP+SK++FSLYLTSIYFAFTTMTTTGYGDILP+RLSV ELVVAI SEV+GAT+FAWVIGNLVNLVLN+DPAERNRKSMMNYLTEY+R
Sbjct:    6 YAAGLHTAAEHNWIADYYCSEDGVSAECPSSKRAFSLYLTSIYFAFTTMTTTGYGDILPNRLSVMELVVAIGSEVIGATIFAWVIGNLVNLVLNLDPAERNRKSMMNYLTEYMR 119
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: D8LB68_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB68_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 7.500e-56
Identity = 126/306 (41.18%), Postives = 189/306 (61.76%), Query Frame = 1 
Query: 1822 QAVLGSVPPERLFSMTGMFHPEAPVKVSWDLWLSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLLVLKIAVGNPNAATSTKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGLH--TTSERNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            Q  L  + P   +    +FHP++  K  WD++++  I++SVLEVT+RLGFD PA+G W +  + VD LFF DMLVS  TA  + DG +V ++K +A  YL+ WF+VD VSTVP D +  ++ + N +A  STKL+R    XXXXXXXXX K+  F E +++   + P+ ++L +L+ILM+F+AH+ AC+WYA G H  T    +WI +Y  ++ + S    +     SL    +  +  T +      +     +VAE++ A+ SEV G T+FA+VIG LV +VLN+DP  R RK  + YL+EY+R
Sbjct: 1330 QLALNELSPHVFWGRLHVFHPDSMTKAFWDVFVAFFIVFSVLEVTFRLGFDSPAEGSWAIFGHVVDCLFFVDMLVSFDTAYWD-DGNIVTSRKLIAGEYLRTWFIVDFVSTVPLDTMFSRMLL-NSDALRSTKLIRXXXXXXXXXXXXXLKMSTFFERYQEAMQMNPAVIRLTKLVILMSFAAHLAACMWYAVGAHSITAGRSSWILEYCINDGEYSSCLDDQGLGASLGWCLLPMSSLTWSRHLGSTVATKANNVAEMLTALVSEVAGTTLFAYVIGALVTIVLNLDPQTRLRKQKVEYLSEYMR 1633
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: G4Z1L1_PHYSP (Ion_trans domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z1L1_PHYSP)

HSP 1 Score: 187 bits (475), Expect = 4.160e-49
Identity = 110/294 (37.41%), Postives = 171/294 (58.16%), Query Frame = 1 
Query: 1867 TGMFHPEAPVKVSWDLWLSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLLVLKIAVGNPNAATS---TKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGL--HTTSERNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            T +FHP+ P  V W  ++ + I++S++ V +RLG+D  A GGW VL   +D  F  D+L++ RTA  + +  ++ + K +   Y KGWFV+DL+STVP D L  + AVG  N       TKL+R  R+ XXXXXXXXX          D+  L PS+ +L +LL +M+   H NAC+++   +   T     W  D +  +D    +C +       Y+ ++Y+AFTT+TT GYGD+ P   S  ELVV I   V+ ATVF ++I +++ L+ N+DP++R  + +M  + +Y+R
Sbjct:    5 TYLFHPQEPAIVFWQFFVGIGIVYSIIVVPFRLGYDVDATGGWYVLEMIIDGFFLVDILLNFRTAYFDDERRLIYDPKALFWRYAKGWFVLDLISTVPIDEL-FQAAVGTSNQTVRLFPTKLLRLFRVAXXXXXXXXXXXXXVFGRIRDHVQLSPSTERLFKLLAIMSIICHWNACMFHGVMMASETAGYHTWCDDAFFPDDPHQLECSSLVPIGDRYIAALYWAFTTLTTVGYGDVKPSVHSPYELVVVIILIVVNATVFGYIISSVMTLIHNLDPSDREYRLLMTEMKDYLR 297
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: A0A7S3XVF5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVF5_HETAK)

HSP 1 Score: 193 bits (491), Expect = 1.070e-48
Identity = 109/263 (41.44%), Postives = 170/263 (64.64%), Query Frame = 1 
Query: 1918 LSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLLVLKIAVGNPNAATSTKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGLHTTSERNWIADYYCSEDDVSG--DCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRK 2700
            +S++II+SV+EVTYRL FD  A+GG + LS+ +D LF  DM V+ RTA+ + D  ++  Q+RVA  Y K WF +D  ST+P +L++     G+       KL+R+   XXXXXXXXXX +  F +++ED  P+ P+ ++  +L ++M+F+AH+  C +Y+   ++++E  W+  Y    +D +   +C +     S YL ++Y+AFTTMTT GYGDI P   +  E+VV    +V   T+FA+VIG LVNLVLN++P +++RK
Sbjct:    2 ISLLIIYSVVEVTYRLAFDHAAEGGLLYLSWAIDLLFAADMAVTFRTAIYD-DHMLIIKQERVASTYFKSWFWIDFSSTIPLNLMLSSFVSGDQ--LRGAKLIRAXXXXXXXXXXXXXXMSTFFKKYEDYIPVNPTFIRFLKLFMIMSFAAHLYGCGFYSVANYSSNEETWVNSYCLPYEDGNPAVECLHELGLASKYLAAVYWAFTTMTTVGYGDIYPDARNRTEIVVTFVCQVTATTLFAYVIGALVNLVLNLNPGDKSRK 261
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: A0A1V9Y795_9STRA (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y795_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.390e-48
Identity = 109/289 (37.72%), Postives = 170/289 (58.82%), Query Frame = 1 
Query: 1873 MFHPEAPVKVSWDLWLSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLLVLKIAVGNPNAATSTKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGLHTT--SERNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            +FHPE    V+W L +++ I++S + V YR+GF+    G  +     VD+ FF D+L+S RTA    + +++ NQK +  +YL+GWF++D VST+P D +       +     STK++R    XXXXXXXXXX      +   D+  L PS  +L +L+++M    H N CI++   L     + R W  +Y+  +DD  G C N   +   YL SIY+AFTTMTT GYGDI P++ SVAE+  AI   ++ +TVFA+V+  ++ ++ N DP+ R  K+ +  + +Y+R
Sbjct:  659 VFHPEENFLVNWQLAIAIAIVYSTIMVPYRIGFNSDPTGTGLTFDLFVDSFFFLDILISFRTAYYTTERQLIVNQKTIIFSYLRGWFMIDFVSTLPIDTIGSYFISNSSQVLASTKILRIXXXXXXXXXXXXXXXGKVFKRLRDSIQLSPSGERLLKLVMIMVLFGHWNGCIFHFIMLQEEDFALRTWCTEYFFPQDDDPGLCSNRVATVDRYLASIYWAFTTMTTVGYGDIHPYKFSVAEITFAIVCLLVNSTVFAYVVSGIIEVIYNYDPSAREYKTRLYAMKDYVR 947
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: A0A1W0A1G7_9STRA (cGMP-dependent protein kinase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1G7_9STRA)

HSP 1 Score: 197 bits (501), Expect = 4.650e-48
Identity = 106/296 (35.81%), Postives = 170/296 (57.43%), Query Frame = 1 
Query: 1852 RLFSMTGMFHPEAPVKVSWDLWLSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLLVLKIAVGNPNAATSTKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGLHTTSE--RNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            +L     + HPE  + ++W L +++ I++S + V YR+GF   A G  +V    VD+LFFTD+L++ +TA    +  +V N++ +   YLKGWF++D +ST+P D +       +    +STK++R LR+    XXXXXX      +   D   L PSS +L +L+ ++    H N C+++   L       R W  +Y+   D+  G C N       YL S+Y+AFTTMTT GYGDI P+R SVAE++ AI   +L +TVFA+V+  ++ ++ N DP++R  K  +  + +Y+R
Sbjct: 1094 KLAHKNWVLHPEEALLINWQLIIAIAIVYSTIVVPYRIGFKSDATGLGLVFDLFVDSLFFTDILIAFQTAYYTSERTLVVNKRTIMFTYLKGWFMIDFISTLPIDTIGGYFIANSSQVLSSTKILRFLRIARIFXXXXXXXXXXVFKRVRDAIQLSPSSERLLKLITIIFLFGHWNGCVFHFIMLQEEDFGLRTWCTEYFFPLDEDPGLCSNRVALIDRYLASLYWAFTTMTTVGYGDIHPYRFSVAEIMFAIFCLLLNSTVFAYVVSGIIEVIYNYDPSDREYKFQLYAMKDYVR 1389
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: A0A067C2V8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2V8_SAPPC)

HSP 1 Score: 194 bits (494), Expect = 2.430e-47
Identity = 112/291 (38.49%), Postives = 169/291 (58.08%), Query Frame = 1 
Query: 1873 MFHPEAPVKVSWDLWLSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLL--VLKIAVGNPNAATSTKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGLHTTSE--RNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            +FHP+    V+W L ++  I++S + V YR+GF+    G  ++    VDALFF D+ +S RTA    + ++V N   +  AYL+GWF+VDLVSTVP D +      A  +     STK++R  R XXXXXXXXXX      +   D+  L PS+ +L +L+++M    H N C+++   L       R W  +Y+  +D+  G C N       YL SIY+AFTTM T GYGDI P+R SVAE++  I   ++ +TVFA+V+  ++ ++ N DP+ R   S +N + +Y+R
Sbjct:  653 VFHPQDLFLVNWQLSVATAIMYSTIMVPYRIGFNADPSGSELIFDLFVDALFFVDIGISFRTAYYTIERQLVVNGNTIMYAYLRGWFLVDLVSTVPIDTIGSYFITARNSSQVLASTKILRVFRXXXXXXXXXXXXXGKVFKRIRDSIQLSPSTERLAKLVLIMVLFGHWNGCMFHFIMLQEEDLGLRTWCTEYFFPQDEEPGLCSNRVSIVDRYLASIYWAFTTMATVGYGDIRPYRFSVAEILFTIICLLVNSTVFAYVVSGIIEVIYNYDPSAREYSSRLNAMKDYVR 943
[Close]
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Match: A0A1V9YN52_9STRA (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN52_9STRA)

HSP 1 Score: 192 bits (489), Expect = 9.930e-47
Identity = 114/298 (38.26%), Postives = 172/298 (57.72%), Query Frame = 1 
Query: 1852 RLFSMTGMFHPEAPVKVSWDLWLSMVIIWSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEVVANQKRVAVAYLKGWFVVDLVSTVPWDLL-VLKIAVGNPNAA-TSTKLVRSLRLXXXXXXXXXXKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINACIWYAAGLHTTSE--RNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTTMTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPAERNRKSMMNYLTEYIR 2733
            RL     + HP+    V+W L ++  II+S + V YR+GF+    G  +     VDALFF D+ +S RTA    + ++V + K + + YL+GWF++D VSTVP D +  + + VGN      STK++R    XXXXXXXXXX      + + D+  L PSS +L +L+++M    H N CI++   L       R W  +Y+   DD  G C N       Y+ S+Y+AFTTMTT GYGDI P++ SVAE+V  I   ++ +TVFA+V+  ++ ++ N DP+ R   S +N + +Y+R
Sbjct:  643 RLAHQHWVLHPQDTFVVNWQLTIAFAIIYSTIMVPYRIGFNSDPIGTDLGFDLFVDALFFADIAISFRTAFYTAERQLVVHSKTIMLTYLRGWFLIDFVSTVPIDTIGSIFLHVGNSRQVLASTKILRVFXXXXXXXXXXXXXXGKVFKRFRDSIQLSPSSERLLKLVMIMVLFGHWNGCIFHFIMLQEEDMGLRTWCTEYFFPLDDDPGLCSNRVAIADRYIASLYWAFTTMTTVGYGDIHPYKFSVAEIVFTIMCLLVNSTVFAYVVSGIIEVIYNYDPSAREYSSRLNAMKDYVR 940
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1258.2083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFK4_ECTSI8.690e-28855.54Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5JXQ6_9PHAE8.090e-12444.11Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5JY39_9PHAE7.370e-5785.96Ion_trans_2 domain-containing protein n=1 Tax=Ecto... [more]
D8LB68_ECTSI7.500e-5641.18Cyclic nucleotide-binding domain-containing protei... [more]
G4Z1L1_PHYSP4.160e-4937.41Ion_trans domain-containing protein n=1 Tax=Phytop... [more]
A0A7S3XVF5_HETAK1.070e-4841.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V9Y795_9STRA1.390e-4837.72Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
A0A1W0A1G7_9STRA4.650e-4835.81cGMP-dependent protein kinase (Fragment) n=1 Tax=T... [more]
A0A067C2V8_SAPPC2.430e-4738.49Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YN52_9STRA9.930e-4738.26Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1258contigL-elsbetiae_contig1258:15891..21884 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score794.3
Seed ortholog evalue5.8e-227
Seed eggNOG ortholog2880.D8LFK4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.voltage-gated potassium channel activity
EggNOG OGsKOG0498@1,KOG0498@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2735
Cds size2598
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815449.5959513-CDS-L-elsbetiae_contig1258:15890..159681622815449.5959513-CDS-L-elsbetiae_contig1258:15890..15968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 15891..15968 -
1691682903.8365328-CDS-L-elsbetiae_contig1258:15890..159681691682903.8365328-CDS-L-elsbetiae_contig1258:15890..15968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 15891..15968 -
1622815449.6061568-CDS-L-elsbetiae_contig1258:16613..166951622815449.6061568-CDS-L-elsbetiae_contig1258:16613..16695Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 16614..16695 -
1691682903.8494458-CDS-L-elsbetiae_contig1258:16613..166951691682903.8494458-CDS-L-elsbetiae_contig1258:16613..16695Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 16614..16695 -
1622815449.6157897-CDS-L-elsbetiae_contig1258:17410..175931622815449.6157897-CDS-L-elsbetiae_contig1258:17410..17593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 17411..17593 -
1691682903.8595657-CDS-L-elsbetiae_contig1258:17410..175931691682903.8595657-CDS-L-elsbetiae_contig1258:17410..17593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 17411..17593 -
1622815449.6248598-CDS-L-elsbetiae_contig1258:17967..181471622815449.6248598-CDS-L-elsbetiae_contig1258:17967..18147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 17968..18147 -
1691682903.871651-CDS-L-elsbetiae_contig1258:17967..181471691682903.871651-CDS-L-elsbetiae_contig1258:17967..18147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 17968..18147 -
1622815449.63683-CDS-L-elsbetiae_contig1258:18526..186121622815449.63683-CDS-L-elsbetiae_contig1258:18526..18612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 18527..18612 -
1691682903.8801417-CDS-L-elsbetiae_contig1258:18526..186121691682903.8801417-CDS-L-elsbetiae_contig1258:18526..18612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 18527..18612 -
1622815449.6480248-CDS-L-elsbetiae_contig1258:18786..190111622815449.6480248-CDS-L-elsbetiae_contig1258:18786..19011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 18787..19011 -
1691682903.8900666-CDS-L-elsbetiae_contig1258:18786..190111691682903.8900666-CDS-L-elsbetiae_contig1258:18786..19011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 18787..19011 -
1622815449.6568248-CDS-L-elsbetiae_contig1258:19210..205181622815449.6568248-CDS-L-elsbetiae_contig1258:19210..20518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 19211..20518 -
1691682903.8977385-CDS-L-elsbetiae_contig1258:19210..205181691682903.8977385-CDS-L-elsbetiae_contig1258:19210..20518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 19211..20518 -
1622815449.6707103-CDS-L-elsbetiae_contig1258:20827..209631622815449.6707103-CDS-L-elsbetiae_contig1258:20827..20963Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 20828..20963 -
1691682903.905598-CDS-L-elsbetiae_contig1258:20827..209631691682903.905598-CDS-L-elsbetiae_contig1258:20827..20963Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 20828..20963 -
1622815449.6804893-CDS-L-elsbetiae_contig1258:21210..213951622815449.6804893-CDS-L-elsbetiae_contig1258:21210..21395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 21211..21395 -
1691682903.9137437-CDS-L-elsbetiae_contig1258:21210..213951691682903.9137437-CDS-L-elsbetiae_contig1258:21210..21395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 21211..21395 -
1622815449.692687-CDS-L-elsbetiae_contig1258:21614..217491622815449.692687-CDS-L-elsbetiae_contig1258:21614..21749Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 21615..21749 -
1691682903.9258158-CDS-L-elsbetiae_contig1258:21614..217491691682903.9258158-CDS-L-elsbetiae_contig1258:21614..21749Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1258 21615..21749 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815449.7043798-UTR-L-elsbetiae_contig1258:21749..218841622815449.7043798-UTR-L-elsbetiae_contig1258:21749..21884Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1258 21750..21884 -
1691682903.934586-UTR-L-elsbetiae_contig1258:21749..218841691682903.934586-UTR-L-elsbetiae_contig1258:21749..21884Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1258 21750..21884 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1258.2083.1prot_L-elsbetiae_contig1258.2083.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1258 15891..21749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1258.2083.1

>prot_L-elsbetiae_contig1258.2083.1 ID=prot_L-elsbetiae_contig1258.2083.1|Name=mRNA_L-elsbetiae_contig1258.2083.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=866bp
MPGVMSTSLLYAQHRAVARGVEFLAKRPPVLVARLLRKMVPCFANSGDVL
FLEHEVGGHWYLLRSGTISFYVSMSPLETQSEVRLMRSLSNDGHFGLAPV
LLNVLNNETATATTAAELLTVRKDDLVDILRLWPEVMAELTIEAERHFQE
VKTFRTTKQPARKVLRSPSPPPARPKPNAKTKDWRDSPTKSIATNFSDSP
DMYTAQPIALSEAVVGAATGGCNAGSEAFRARSFGDKMGSKGGESVFFKA
DESKETEAAETEAVETEAVETEAVETEAVEYAENVLGGISNIAGAVAKAT
SAVVEAAQRGMMPAAPEQLATVEETDDGDEEEGGKRSATTRADTLDRAGS
SADKPSPVKNADSSSLRSQLLDKIDTIRGDEGDKDAGERERSGVQEEQRG
VARQGAPAVAVADGIGPRESLRSTETVAGNVAATATPIVSPRRRAGELVR
PPPIVTEDIPPILHTSVYKKMGRGGSSDSGDADEDLGQVRRCFVAKTFSP
SDLGLGELRRGGDNEGGDAVPEEMTKASLMKDRRRRRTIHKGIPGIEGRR
HTVDEVLGLDDPQAVLGSVPPERLFSMTGMFHPEAPVKVSWDLWLSMVII
WSVLEVTYRLGFDRPAQGGWIVLSYCVDALFFTDMLVSLRTALVNRDGEV
VANQKRVAVAYLKGWFVVDLVSTVPWDLLVLKIAVGNPNAATSTKLVRSL
RLARLVRLIRLLKIPDFMEEWEDNSPLGPSSVKLGRLLILMAFSAHINAC
IWYAAGLHTTSERNWIADYYCSEDDVSGDCPNSKQSFSLYLTSIYFAFTT
MTTTGYGDILPHRLSVAELVVAIASEVLGATVFAWVIGNLVNLVLNIDPA
ERNRKSMMNYLTEYIR
back to top

mRNA from alignment at L-elsbetiae_contig1258:15891..21884-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1258.2083.1 ID=mRNA_L-elsbetiae_contig1258.2083.1|Name=mRNA_L-elsbetiae_contig1258.2083.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5994bp|location=Sequence derived from alignment at L-elsbetiae_contig1258:15891..21884- (Laminarionema elsbetiae ELsaHSoW15)
GGGTGCAATGGTCGATCAATGGACGCACGCTGAACTTCCTAGTTTTCTCC
AGCGTTGGCGGACAAGATCCGTCGTCAATATCGCTATATATTCACGGAGG
TGGGCGTCTTCGACAACTCGGAGATCGTGGACGTCATGCCTGGTGTCATG
TCGACCTCCCTCCTTTACGCCCAGCATCGTGCGGTGGCGAGGGGGGTGGA
GTTCTTGGCCAAGCGCCCTCCTGTGTTGGTAGCCCGGCTGCTTCGAAAGA
TGGTGCCATGCTTTGCCAATGTGAGATTTGTTGGCGCACGTGTGTGTTGA
TGTGTGAGCCCCCTTGCTCTGAGATTCTCTTCGACAGCCGTGTCTCCGTG
TCAGCAAAAGTCCTGCCAGAAGTATCAGGAACCTTCCGCCCAAAAAACAC
CCCCACAAACACGCCCCGGCAGCCAGAGGAGTACAACGCGAGCGATGCCG
ACCCTATCTTGATTTTGGGAAACGTACATATCACCACAGAGCGGCGACGT
ACTCTTCCTCGAGCACGAAGTGGGAGGACATTGGTACCTTCTACGTTCGG
GCACTATCTCTTTCTACGTATCCATGTCTCCGCTGGAGACGCAGTCAGAG
GTGCGGCTGATGCGGAGCTTGTCGAATGATGGACATTTCGGCCTCGCACC
GGTGCTACTCAACGTGCTCAACAAGTGAGGGGTAGAGCTTTCTTTGCGAA
CTTGGATACTATGCTTAGGAGGCTGATGGCGACCTCTGGGCGCCGAAGCT
ATGGGAATAAGCAACTGGTCTAGTTGAATGCATTGTCGAGCAACTACTGT
AAAAGTTCTCTCATTCGATTATATACCTCCAAAATCACACGCTGGACTTC
GTGCAAGTTGCGGTCGTGGACAATAAGCATTTCGGTGTACCATGGTGTGT
CTGTCTAATGTATGTCAACAGCGAAACTGCTACGGCCACGACCGCTGCGG
AGCTGTTGACTGTCCGCAAGGACGACCTTGTCGACATTCTGCGGCTGTGG
CCGGAAGTAATGGCAGAACTGACGATCGAAGCGGAACGCCATTTCCAAGA
AGTTAAGGTGTGTCACTAGTGACCGAAAAATATGTGTCGTTATCAGTTAT
CCGTAGGTCTGGGAACTGCTCGTGTACTGATGAACTTAATTTGCAACAGC
AGAAAGTTTCGCAGCCGCTAACATGGCCAATATGCAGATGGAGAAAGGTG
GTGGCCGCGAAAGAGGCTATTCTGCATCATTTTCTTGCCAGACGAACGTA
TCCAGTGCCAAACGCGAAGCGCAGCAGCTCAAGTCTAAGTCGCAGTGACT
AACATGCACGCTATTTTCCCGTCGGAATCCCCTCCGCCCCTGCCTCCATA
ACTCGCCCCATCCCAGACATTTCGAACGACAAAGCAACCAGCTAGAAAAG
TTCTCCGATCCCCATCTCCCCCGCCAGCCCGTCCAAAACCAAACGCGAAG
ACAAAAGATTGGAGAGATTCTCCGACCAAGTCAATCGCCACGAACTTCTC
GGACTCTCCGGACATGTACACCGCCCAACCTATCGCTCTTTCCGAGGCCG
TGGTAGGCGCTGCTACTGGAGGCTGTAACGCTGGTTCCGAGGCATTTAGA
GCGCGGTCTTTTGGAGATAAGATGGGGTCGAAGGGCGGCGAGAGTGTGTT
TTTCAAGGCGGACGAAAGCAAAGAGACCGAAGCTGCAGAGACCGAAGCTG
TAGAGACTGAAGCTGTAGAGACCGAAGCTGTAGAGACCGAAGCTGTAGAG
TACGCGGAGAACGTTCTTGGCGGAATAAGTAATATAGCTGGAGCGGTAGC
CAAAGCGACCAGCGCGGTTGTGGAAGCAGCACAACGAGGGATGATGCCGG
CGGCGCCGGAACAACTTGCCACAGTTGAAGAAACAGATGACGGTGATGAA
GAAGAAGGAGGGAAACGTAGTGCCACCACAAGGGCCGATACGCTGGACAG
AGCGGGAAGCAGTGCAGATAAGCCGTCGCCCGTGAAGAATGCGGACTCGT
CCTCGCTACGTTCACAGTTGCTGGACAAAATTGACACCATCCGAGGAGAT
GAGGGAGACAAAGATGCAGGAGAGCGGGAAAGGAGCGGGGTTCAAGAGGA
ACAGCGCGGGGTGGCAAGGCAGGGGGCACCAGCTGTGGCAGTTGCGGACG
GGATAGGACCCCGCGAGTCGCTGAGGTCAACTGAAACAGTTGCTGGCAAC
GTAGCAGCAACAGCCACGCCCATCGTCTCTCCACGTCGGCGGGCAGGGGA
ACTTGTGCGGCCACCGCCGATCGTGACGGAGGATATCCCTCCTATCCTTC
ACACATCCGTGTATAAAAAGATGGGCCGAGGTGGCAGCAGTGACAGTGGC
GACGCCGATGAAGACCTAGGGCAAGTGCGACGGTGTTTCGTAGCGAAGAC
TTTCTCTCCAAGCGATCTCGGGTTGGGAGAGCTGCGGCGGGGCGGTGATA
ATGAGGGTGGGGACGCCGTCCCTGAGGAAATGACAAAGGCATCTCTCATG
AAGGACCGGCGAAGGCGACGGACTATCCACAAAGGAATCCCCGGAATCGA
AGGTCGCAGGCATACCGTGGACGAAGTCTTGGGTTTGGATGATCCGCAGG
CAGTGCTAGGGAGCGTGCCCCCCGAGCGATTGTTTTCGATGACGGGAATG
TTCCACCCAGAGGCTCCTGTGAAGGTAAGGTACACGTATGTTAATGTTGA
TTCGGCCAGAGTTCTGCGAACGAATATTTCGAGCACAAAAGGCGAGGGCT
CATCTTGCCCACCCTCTGCCGTCCCTGTAGGGAGTAGCGTTCAAAACATC
TGAGCGTCATTATCGAGCGTAAAAAGCGCTGACCAGTATTAAATCACTCG
TCTACCTTGAACTATGCCAATAGGTTTCGTGGGACCTCTGGTTATCGATG
GTTATCATCTGGTCGGTGCTGGAGGTTACATACCGCCTCGGCTTCGATCG
ACCTGCCCAGGGCGGCTGGATAGTACTTTCGTATTGCGTGGACGCGCTAT
TCTTCACGGATATGCTTGTCAGCCTCCGCACGGCTCTCGTGAACAGGGAC
GGAGAGGTGGTAGCGAACCAAAAGCGGGTTGCCGTGGCGTACCTCAAGGT
ATGAAGTAGAGTCTCTCTTATTCTCTCCCCCATCCTCCCTGCTCACTGTT
TGCTGCTTTCGGCCAATTTTCAAGGCACGCTCGGTACGTACAATAAAAAT
CACCGAGAAAAAATAACACCTTGAAATTTAATCGGTTGAGTCTGTCGGAC
CCACCGTTGTCTCTTTTGGCAGGGATGGTTTGTGGTGGATTTGGTTTCTA
CGGTGCCGTGGGATCTACTGGTCCTCAAGATTGCCGTGGGGAACCCGAAC
GCTGCTACGTGAGTAAACCAGCATTGACTACGTCTGCTAGGAGCCCTCGT
TACCTCACGTAGTTCTCACGTGCTCAACCCGAGGTTTAGATAACCACTCA
ATGTGATGTCTTGCCTCTTTCCTCACACAAATTAAAAACAATCAACTCAC
GCAAATGAAGTCCCCTGCTTCGACCTCGTCTTCCATGGCTGCGAACATCC
CGCTGACTATACTATATATGTGCCGGGAGCCGCAAGTTCACCAAGTCACA
TCACGTGGTGTGTATTTAAGCAGGCCGCCCGCAGGGCACGCACACCACCT
GCTCGGATGTCGGAAAGTAGTACGAAGTATTCTAGTTACGTGAAGCTGTC
ATTTTGGTTTGTTGAACAAAACCCTTTCCGATAACAGGTCCACCAAGCTG
GTGCGCTCGCTGCGCCTTGCGCGCCTGGTGAGGTTGATTCGGTTGCTCAA
GATCCCAGACTTCATGGAAGAGTGGGAGGACAACTCTCCCCTGGGTCCTT
CAAGCGTCAAGCTCGGCCGACTGCTCATCCTTATGGCCTTCTCGGCGCAC
ATCAACGCGTGCATCTGGTGAGAGACGTATGTTTGTACATACTTTATCCA
ACTACCGCGAGATTTGGCCCACTGTAGTCGTGGATCTGAGAAGCATAACC
ACCTAGGCTTGCCTTGTTTGGTTTTTATGTGGTCGAATACTGAAATGTAG
TTTTATATACCCGTAAAAAATTATGCTACGTAGCACGGTTTATCTATGGG
TCTAACCTGCATTTGAAACCCCAACGGAACAAGCCGGGGGCACGCAGGGC
CAACGGCGCTCTTCAGTGGACACACACTACCGTAGGTTGGTGACAAGCGC
AGTTGCCTTGTCCAGGAAGAATACACGCTGTGTGATTCTGACCGCGGGGT
ACAACCACGCCTTACTTTTCGGGACATTTGAAAACCTGCAGGTATGCGGC
GGGGCTACACACAACTTCCGAGCGCAACTGGATCGCCGACTACTACTGCT
CCGAGGACGATGTTTCTGGCGATTGTCCGAACAGCAAGCAGTCATTTTCT
CTGTACCTGACCAGCATATATTTTGCTTTCACGACCATGACGACGACGGG
ATACGGAGACATTTTGCCCCACCGGTAAATGTACTTGGGATAAACAGAAA
CTGAATCTGGATATTATAATCTGCGAGAGATAAATTATTTTTTTCATGCT
GTACCTTCACCCGAAACATGCCTCTACCAAACAAGCAGGGATGTGACGCC
CGACCGACACCATCCATCAGTGTGGAACGCAATACTCCTCGATCGTATCT
ATCTAGTCTTTCAAGGGATTCATATGTATCACCACCGAACACAAGATGAT
GCGAATGCTTCGCTGATGTTTTATTTCTTCAACGACAACTTGCAATATTT
GAACAGAGATATCTAAAATCGCAGCTTTGTGTTGATACGTAGCACGATAC
AGTCGTGGAGTTTGAGTGTGTACAACATGATCGCCCCGACGAGAATCGCC
TTAAGAAGCCATACCATCCACTCAAAAACACGAAAACTTGCCAAAGTTAT
CTCCACACTATACAATGGACACACGAACGCACCAGATATTCAGTATGTAT
ATGTACCACGACACACAATCAAACCAAAGACTAAACTACCAACTAAACCT
AGACGTACCTCGGTCGTATAGTTTCCCCAACGTCCATACCCCGTCGACAT
ACATATATACATACGTACATTCCCAATATTTTTGTGCTGAGCAACCTTGG
GTTGCATTGTGCTGCACAACATTTCTCACCTGTGCGCGGTTCAAAAGTTA
ACGAAGAAAAGTGGCTTTGAATGTCTGCTATGGTGCCAGGTTGTCCGTGG
CAGAGCTTGTCGTGGCCATAGCTTCCGAGGTGCTGGGGGCGACCGTTTTT
GCGTGGGTCATCGGAAACTTGGTGAGAGAGTTGTTTTTGCACGATTGGAA
TACCTCAGGTATCTAAACCCTGATCGTGTCTAGCACACATTTATGTAGAT
ACACACCATCTTCGAGGACATCCGGGCGGCTGTTGCTTTTCTCGGGCATT
TATGCTTCGAAGTATGGACCCGGTTCAGTCTATGGACAGACCGTTAGGTT
CGTATCAGCACGACGCCAAACATGCCAGTTGCTTCTTTTTTTGTAGAGAA
TGGGGGCTTGCCCTAAGTTTGAACTCCGTTGTTAGCCTGTATGTACTACA
TAGATATGTTCAGTAGTTCGTGAGATTAAATTGCCGCAGAACTCAAGAAA
ACTGTCAAGATGGTATGTTTTCCCGGTTTGATTTAACGCCAAAACAGTTG
TTCACGACAACCGTCAGATGGCGGCTTTTCAAAGTTTACGACAGCTTGTC
GTCAAAGTTTTAGCCCCCGTCCTCTAACTCGCTGAGATATCAGATATGAG
CTGATATCATTGGGAGAATTTCCCAAAGGCCTTGATATCATTCTACGCGA
ATGTCGTTTTTTTTTCTCAAGGAGGGATGCACACAACAAGGCGTGCAAGT
CACATATTGTATGGTTGCTGGTTTGCTGTTAAACGTGGGGGGGGTGGTTG
CGGGATGTTTCTGCAGGTGAACCTGGTTCTCAATATTGACCCAGCCGAAC
GAAACCGCAAGAGCATGATGAACTATCTGACGGAGTACATTCGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1258:15891..21884-

>mRNA_L-elsbetiae_contig1258.2083.1 ID=mRNA_L-elsbetiae_contig1258.2083.1|Name=mRNA_L-elsbetiae_contig1258.2083.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5196bp|location=Sequence derived from alignment at L-elsbetiae_contig1258:15891..21884- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTGGTGTCATGTCGACCTCCCTCCTTTACGCCCAGCATCGTGCGGT
GGCGAGGGGGGTGGAGTTCTTGGCCAAGCGCCCTCCTGTGTTGGTAGCCC
GGCTGCTTCGAAAGATGGTGCCATGCTTTGCCAATATGCCTGGTGTCATG
TCGACCTCCCTCCTTTACGCCCAGCATCGTGCGGTGGCGAGGGGGGTGGA
GTTCTTGGCCAAGCGCCCTCCTGTGTTGGTAGCCCGGCTGCTTCGAAAGA
TGGTGCCATGCTTTGCCAATAGCGGCGACGTACTCTTCCTCGAGCACGAA
GTGGGAGGACATTGGTACCTTCTACGTTCGGGCACTATCTCTTTCTACGT
ATCCATGTCTCCGCTGGAGACGCAGTCAGAGGTGCGGCTGATGCGGAGCT
TGTCGAATGATGGACATTTCGGCCTCGCACCGGTGCTACTCAACGTGCTC
AACAAAGCGGCGACGTACTCTTCCTCGAGCACGAAGTGGGAGGACATTGG
TACCTTCTACGTTCGGGCACTATCTCTTTCTACGTATCCATGTCTCCGCT
GGAGACGCAGTCAGAGGTGCGGCTGATGCGGAGCTTGTCGAATGATGGAC
ATTTCGGCCTCGCACCGGTGCTACTCAACGTGCTCAACAACGAAACTGCT
ACGGCCACGACCGCTGCGGAGCTGTTGACTGTCCGCAAGGACGACCTTGT
CGACATTCTGCGGCTGTGGCCGGAAGTAATGGCAGAACTGACGATCGAAG
CGGAACGCCATTTCCAAGAAGTTAAGCGAAACTGCTACGGCCACGACCGC
TGCGGAGCTGTTGACTGTCCGCAAGGACGACCTTGTCGACATTCTGCGGC
TGTGGCCGGAAGTAATGGCAGAACTGACGATCGAAGCGGAACGCCATTTC
CAAGAAGTTAAGACATTTCGAACGACAAAGCAACCAGCTAGAAAAGTTCT
CCGATCCCCATCTCCCCCGCCAGCCCGTCCAAAACCAAACGCGAAGACAA
AAGATTGGAGAGATTCTCCGACCAAGTCAATCGCCACGAACTTCTCGGAC
TCTCCGGACATGTACACCGCCCAACCTATCGCTCTTTCCGAGGCCGTGGT
AGGCGCTGCTACTGGAGGCTGTAACGCTGGTTCCGAGGCATTTAGAGCGC
GGTCTTTTGGAGATAAGATGGGGTCGAAGGGCGGCGAGAGTGTGTTTTTC
AAGGCGGACGAAAGCAAAGAGACCGAAGCTGCAGAGACCGAAGCTGTAGA
GACTGAAGCTGTAGAGACCGAAGCTGTAGAGACCGAAGCTGTAGAGTACG
CGGAGAACGTTCTTGGCGGAATAAGTAATATAGCTGGAGCGGTAGCCAAA
GCGACCAGCGCGGTTGTGGAAGCAGCACAACGAGGGATGATGCCGGCGGC
GCCGGAACAACTTGCCACAGTTGAAGAAACAGATGACGGTGATGAAGAAG
AAGGAGGGAAACGTAGTGCCACCACAAGGGCCGATACGCTGGACAGAGCG
GGAAGCAGTGCAGATAAGCCGTCGCCCGTGAAGAATGCGGACTCGTCCTC
GCTACGTTCACAGTTGCTGGACAAAATTGACACCATCCGAGGAGATGAGG
GAGACAAAGATGCAGGAGAGCGGGAAAGGAGCGGGGTTCAAGAGGAACAG
CGCGGGGTGGCAAGGCAGGGGGCACCAGCTGTGGCAGTTGCGGACGGGAT
AGGACCCCGCGAGTCGCTGAGGTCAACTGAAACAGTTGCTGGCAACGTAG
CAGCAACAGCCACGCCCATCGTCTCTCCACGTCGGCGGGCAGGGGAACTT
GTGCGGCCACCGCCGATCGTGACGGAGGATATCCCTCCTATCCTTCACAC
ATCCGTGTATAAAAAGATGGGCCGAGGTGGCAGCAGTGACAGTGGCGACG
CCGATGAAGACCTAGGGCAAGTGCGACGGTGTTTCGTAGCGAAGACTTTC
TCTCCAAGCGATCTCGGGTTGGGAGAGCTGCGGCGGGGCGGTGATAATGA
GGGTGGGGACGCCGTCCCTGAGGAAATGACAAAGGCATCTCTCATGAAGG
ACCGGCGAAGGCGACGGACTATCCACAAAGGAATCCCCGGAATCGAAGGT
CGCAGGCATACCGTGGACGAAGTCTTGGGTTTGGATGATCCGCAGGCAGT
GCTAGGGAGCGTGCCCCCCGAGCGATTGTTTTCGATGACGGGAATGTTCC
ACCCAGAGGCTCCTGTGAAGACATTTCGAACGACAAAGCAACCAGCTAGA
AAAGTTCTCCGATCCCCATCTCCCCCGCCAGCCCGTCCAAAACCAAACGC
GAAGACAAAAGATTGGAGAGATTCTCCGACCAAGTCAATCGCCACGAACT
TCTCGGACTCTCCGGACATGTACACCGCCCAACCTATCGCTCTTTCCGAG
GCCGTGGTAGGCGCTGCTACTGGAGGCTGTAACGCTGGTTCCGAGGCATT
TAGAGCGCGGTCTTTTGGAGATAAGATGGGGTCGAAGGGCGGCGAGAGTG
TGTTTTTCAAGGCGGACGAAAGCAAAGAGACCGAAGCTGCAGAGACCGAA
GCTGTAGAGACTGAAGCTGTAGAGACCGAAGCTGTAGAGACCGAAGCTGT
AGAGTACGCGGAGAACGTTCTTGGCGGAATAAGTAATATAGCTGGAGCGG
TAGCCAAAGCGACCAGCGCGGTTGTGGAAGCAGCACAACGAGGGATGATG
CCGGCGGCGCCGGAACAACTTGCCACAGTTGAAGAAACAGATGACGGTGA
TGAAGAAGAAGGAGGGAAACGTAGTGCCACCACAAGGGCCGATACGCTGG
ACAGAGCGGGAAGCAGTGCAGATAAGCCGTCGCCCGTGAAGAATGCGGAC
TCGTCCTCGCTACGTTCACAGTTGCTGGACAAAATTGACACCATCCGAGG
AGATGAGGGAGACAAAGATGCAGGAGAGCGGGAAAGGAGCGGGGTTCAAG
AGGAACAGCGCGGGGTGGCAAGGCAGGGGGCACCAGCTGTGGCAGTTGCG
GACGGGATAGGACCCCGCGAGTCGCTGAGGTCAACTGAAACAGTTGCTGG
CAACGTAGCAGCAACAGCCACGCCCATCGTCTCTCCACGTCGGCGGGCAG
GGGAACTTGTGCGGCCACCGCCGATCGTGACGGAGGATATCCCTCCTATC
CTTCACACATCCGTGTATAAAAAGATGGGCCGAGGTGGCAGCAGTGACAG
TGGCGACGCCGATGAAGACCTAGGGCAAGTGCGACGGTGTTTCGTAGCGA
AGACTTTCTCTCCAAGCGATCTCGGGTTGGGAGAGCTGCGGCGGGGCGGT
GATAATGAGGGTGGGGACGCCGTCCCTGAGGAAATGACAAAGGCATCTCT
CATGAAGGACCGGCGAAGGCGACGGACTATCCACAAAGGAATCCCCGGAA
TCGAAGGTCGCAGGCATACCGTGGACGAAGTCTTGGGTTTGGATGATCCG
CAGGCAGTGCTAGGGAGCGTGCCCCCCGAGCGATTGTTTTCGATGACGGG
AATGTTCCACCCAGAGGCTCCTGTGAAGGTTTCGTGGGACCTCTGGTTAT
CGATGGTTATCATCTGGTCGGTGCTGGAGGTTACATACCGCCTCGGCTTC
GATCGACCTGCCCAGGGCGGCTGGATAGTACTTTCGTATTGCGTGGACGC
GCTATTCTTCACGGATATGCTTGTCAGCCTCCGCACGGCTCTCGTGAACA
GGGACGGAGAGGTGGTAGCGAACCAAAAGCGGGTTGCCGTGGCGTACCTC
AAGGTTTCGTGGGACCTCTGGTTATCGATGGTTATCATCTGGTCGGTGCT
GGAGGTTACATACCGCCTCGGCTTCGATCGACCTGCCCAGGGCGGCTGGA
TAGTACTTTCGTATTGCGTGGACGCGCTATTCTTCACGGATATGCTTGTC
AGCCTCCGCACGGCTCTCGTGAACAGGGACGGAGAGGTGGTAGCGAACCA
AAAGCGGGTTGCCGTGGCGTACCTCAAGGGATGGTTTGTGGTGGATTTGG
TTTCTACGGTGCCGTGGGATCTACTGGTCCTCAAGATTGCCGTGGGGAAC
CCGAACGCTGCTACGGATGGTTTGTGGTGGATTTGGTTTCTACGGTGCCG
TGGGATCTACTGGTCCTCAAGATTGCCGTGGGGAACCCGAACGCTGCTAC
GTCCACCAAGCTGGTGCGCTCGCTGCGCCTTGCGCGCCTGGTGAGGTTGA
TTCGGTTGCTCAAGATCCCAGACTTCATGGAAGAGTGGGAGGACAACTCT
CCCCTGGGTCCTTCAAGCGTCAAGCTCGGCCGACTGCTCATCCTTATGGC
CTTCTCGGCGCACATCAACGCGTGCATCTGGTCCACCAAGCTGGTGCGCT
CGCTGCGCCTTGCGCGCCTGGTGAGGTTGATTCGGTTGCTCAAGATCCCA
GACTTCATGGAAGAGTGGGAGGACAACTCTCCCCTGGGTCCTTCAAGCGT
CAAGCTCGGCCGACTGCTCATCCTTATGGCCTTCTCGGCGCACATCAACG
CGTGCATCTGGTATGCGGCGGGGCTACACACAACTTCCGAGCGCAACTGG
ATCGCCGACTACTACTGCTCCGAGGACGATGTTTCTGGCGATTGTCCGAA
CAGCAAGCAGTCATTTTCTCTGTACCTGACCAGCATATATTTTGCTTTCA
CGACCATGACGACGACGGGATACGGAGACATTTTGCCCCACCGGTATGCG
GCGGGGCTACACACAACTTCCGAGCGCAACTGGATCGCCGACTACTACTG
CTCCGAGGACGATGTTTCTGGCGATTGTCCGAACAGCAAGCAGTCATTTT
CTCTGTACCTGACCAGCATATATTTTGCTTTCACGACCATGACGACGACG
GGATACGGAGACATTTTGCCCCACCGGTTGTCCGTGGCAGAGCTTGTCGT
GGCCATAGCTTCCGAGGTGCTGGGGGCGACCGTTTTTGCGTGGGTCATCG
GAAACTTGGTTGTCCGTGGCAGAGCTTGTCGTGGCCATAGCTTCCGAGGT
GCTGGGGGCGACCGTTTTTGCGTGGGTCATCGGAAACTTGGTGAACCTGG
TTCTCAATATTGACCCAGCCGAACGAAACCGCAAGAGCATGATGAACTAT
CTGACGGAGTACATTCGCGTGAACCTGGTTCTCAATATTGACCCAGCCGA
ACGAAACCGCAAGAGCATGATGAACTATCTGACGGAGTACATTCGC
back to top