prot_L-elsbetiae_contig9924.18862.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9924.18862.1
Unique Nameprot_L-elsbetiae_contig9924.18862.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length706
Homology
BLAST of mRNA_L-elsbetiae_contig9924.18862.1 vs. uniprot
Match: D7G3I4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I4_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.270e-43
Identity = 205/510 (40.20%), Postives = 247/510 (48.43%), Query Frame = 0
Query:  147 EVDEAADRNSELMDEIARMDEESILLEAESDLMAITIDSSDXXXXXXXXXXXXXXXXXXXXXRGAEASSSTQDEKEVEAEGAGPADGSRASLDDSGYAPDAETTPSSAGAVDEAISGEEWEEEGVSSDGKSAEAAAVVATVSGAGGSCSGRHAVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVDNAVRETLENLTAGVAILVGDEQ-----FLSCSEVLSELQSDAGDD---------------------------------HGGXXXXXXXXXXXXXXXXXXEGGIPLLAGARAGESLQTVAGSAPHKRLKIAVGPDMQEEEPPVPRLQWGVNSVLMDSPLTPSRYDSGDGSRSPSACSVSPCRLASTSLLLQETAEDGEGLGGGPLAIEVEVEGDDGDAADDDDNAVEEARDSSSWEEGAPQAFMGPLSPLSIASSPEFLGASEPSKQNG-WGGRLSVVSEGHESRAS 617
            E D+AA+ ++ +MD+IARMDE+SILL+AE+ LMAI+IDS D                       AEA+                  G+R+SLDDSGYAPDAE  P S   VD+               G + +A   +A   G+    S      PS                        XXXXXXXXXXXXXXXXXXXXXXX                  VD AVRETL+NL AGVAIL G ++      L C EVLSELQS+ GD                                   G                   E   PL A   AGES++T      HKRLKIAVG ++QEEEPPVPRL WGVN + MDSPLTPSRYD     R+PS  S+SPCR   T LLL++ +E     G   L IE  + G+  +   +D +  EE R SS W  G P+  M PLSP S+ SSP+ L  SE +K N  WGGRLSV+SEG ESR S
Sbjct:  973 EKDDAAEISA-VMDDIARMDEQSILLDAETALMAISIDSGDDV---------------------AEAAGG----------------GARSSLDDSGYAPDAEMNPPSLAGVDDDAPA-----------GPARDADPQLAAERGSFDPASAGEEEGPSDVEGETATGDERRVLASPVASDHDXXXXXXXXXXXXXXXXXXXXXXXGGESTGG-----------VDAAVRETLDNLAAGVAILAGGDEEECDELLGCDEVLSELQSEDGDAGEGTVGDXXXXXXXXXXXXXXXXXXXXDEDPGVRGTKEAGGDGAGDVDAGGAVVEEHAPLAAKELAGESVRTGL----HKRLKIAVGSELQEEEPPVPRLHWGVNHIAMDSPLTPSRYDD---ERAPSTSSLSPCRQEFTGLLLEKGSESAGSTGA--LTIEPGLLGNSSNGGAND-SFEEETRVSSPWR-GDPERLMSPLSPFSVDSSPDALEESELTKPNKLWGGRLSVLSEGGESRLS 1411          
BLAST of mRNA_L-elsbetiae_contig9924.18862.1 vs. uniprot
Match: A0A6H5KR12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR12_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.740e-41
Identity = 240/593 (40.47%), Postives = 285/593 (48.06%), Query Frame = 0
Query:  147 EVDEAADRNSELMDEIARMDEESILLEAESDLMAITIDSSDXXXXXXXXXXXXXXXXXXXXXRGAEASSSTQDEKEVEAEGAGPADGSRASLDDSGYAPDAETTPSSAGAVDEAISGEEWEEEGVSSDGKSAEAAAVVATVSGAGGSCSGRHAVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVDNAVRETLENLTAGVAILVGDEQ-----FLSCSEVLSELQSDAGDDHGGXXXXXXXXXXXXXXXXXX----------------EGG-----------------IPLLAGARAGESLQTVAGSAPHKRLKIAVGPDMQEEEPPVPRLQWGVNSVLMDSPLTPSRYDSGDGSRSPSACSVSPCRLASTSLLLQETAEDGEGLGGGPLAIEVEVEGDDGDAADDDDNAVEEARDSSSWEEGAPQAFMGPLSPLSIASSPEFLGASEPSKQNGW-GGRLSVVSEGHESRASAGSAGDGGDVNGDGGGDDGTASLMKKARCMTGGTEETASPPSRRVSTEFL-PPADATAAA-------------GDGAAEPGQD 686
            E D+AA+ ++ ++++IAR DEESILL+AE+ LMAI+ DS +                       AEA                   G+R+SLDDSGYAPDAE  P S   VD+               G + +A   +A   G+    S R    PS                      XXXXXXXXXXXXXXXXXXXXXXXXXXX                VD AVRETL NL AGVAIL G ++      L C EVLSELQS+ GD   G            XXXXXX                EGG                  PL A   AGES++T      HKRLKIAVG ++QEEEPPVPRL WGVN + MDSPLTPSRYD     R P   S+SPCR   T LL+++ +E     G   +   +     +G A   +D+  EE R SS W  G P+  + PLSP S+ASSP+ L  SE +K N   GGRLSV+SEG ESR S  S G          GDD TA   K      G  E+TASP S+  STE L PP    AAA             GDG A P QD
Sbjct: 1008 EKDDAAEIST-VINDIARTDEESILLDAETALMAISNDSGNDV---------------------AEAVGG----------------GTRSSLDDSGYAPDAEMNPPSLAGVDDDAPA-----------GPADDADPQLAAERGSFDPASAREEEGPSDVEGETATGDEQRVSASPVASDXXXXXXXXXXXXXXXXXXXXXXXXXXXESTGG-----------VDAAVRETLNNLAAGVAILAGGDEDECDELLGCDEVLSELQSEDGDAGAGTVGDTAREDSAEXXXXXXXXXXXXDEAPGVRGTKEGGSDGAGAADAGGAVVEEHAPLAAKGLAGESVRTGL----HKRLKIAVGSELQEEEPPVPRLHWGVNHIAMDSPLTPSRYDDD---RVPPTSSLSPCRQEFTGLLVEKGSESAGSTGAHTIEPGLLGNKSNGGA---NDSFEEETRVSSPWR-GDPERLISPLSPFSVASSPDALEGSELTKPNKLCGGRLSVLSEGGESRLSRESRGSVESKVTSVAGDD-TAGPQKGRHTTGGADEQTASPSSQWASTEPLSPPPSIRAAASPAVGSXXXXXXXGDGTALPQQD 1528          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9924.18862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3I4_ECTSI2.270e-4340.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR12_9PHAE1.740e-4140.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9924contigL-elsbetiae_contig9924:555..5789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9924.18862.1mRNA_L-elsbetiae_contig9924.18862.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9924 554..5789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9924.18862.1 ID=prot_L-elsbetiae_contig9924.18862.1|Name=mRNA_L-elsbetiae_contig9924.18862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=706bp
GGAGAWALDTSCEDPEEEGHEQVGRVSTAAPPDGDQARAERLSGVSVIGP
GTLSDEGEEGEEEEEETEGFFMPMADLGGQGNGCCPAGQGGEHAPSPEPA
AVAAPVSAQEEEGPPLLPGAEVVEPEAAAAVGGVPLPAEEEGGGGGEVDE
AADRNSELMDEIARMDEESILLEAESDLMAITIDSSDDGDAAAAADDDDS
DDPGDDDHRGAEASSSTQDEKEVEAEGAGPADGSRASLDDSGYAPDAETT
PSSAGAVDEAISGEEWEEEGVSSDGKSAEAAAVVATVSGAGGSCSGRHAV
APSAEEEEAQDGTEHAAAAAAAAAVAAAAGNASATAAAAAAAAATAAAAA
AAAAAAECAAAAAESAAVVDNAVRETLENLTAGVAILVGDEQFLSCSEVL
SELQSDAGDDHGGKAAGGAGGGAVEEEEQEQEGGIPLLAGARAGESLQTV
AGSAPHKRLKIAVGPDMQEEEPPVPRLQWGVNSVLMDSPLTPSRYDSGDG
SRSPSACSVSPCRLASTSLLLQETAEDGEGLGGGPLAIEVEVEGDDGDAA
DDDDNAVEEARDSSSWEEGAPQAFMGPLSPLSIASSPEFLGASEPSKQNG
WGGRLSVVSEGHESRASAGSAGDGGDVNGDGGGDDGTASLMKKARCMTGG
TEETASPPSRRVSTEFLPPADATAAAGDGAAEPGQDGGAGAAAGAADDKR
SPSQEE
back to top