prot_L-elsbetiae_contig984.18787.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig984.18787.1
Unique Nameprot_L-elsbetiae_contig984.18787.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length464
Homology
BLAST of mRNA_L-elsbetiae_contig984.18787.1 vs. uniprot
Match: D7FIZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ6_ECTSI)

HSP 1 Score: 526 bits (1356), Expect = 1.360e-182
Identity = 288/448 (64.29%), Postives = 344/448 (76.79%), Query Frame = 0
Query:   27 LPAAQSSSLHSH----QTWGLVVTAAATFVTLAVSLGASNTSTPDVMGSSAARVGHQSLFASPKNHGGISIVQRSR-------GRALQEDTAVVSTPIVQYGTELQLFMCSPSQIEAGDDAYLVDETRVASALSKVDGLRQADADKITVAITTGPTDVDDNNYLCDTVGTLQWHAQIKYATADATARDTTPAVMAAQATDYVSYSATEFKAGLTASINDEYVGEAETVELSAADVVVPNVGWIVTFPAEEPVVQNTNTARSSDGLAIGLGGDNGLWVWWVWLIYALLVACCLVPLCCFLRXXXEDDKNATRERLDAIRKGRGAEGLAKIRGPEWGITELDFEGDYNAYENQEMKREYDGAGKGVTPTAYKASSHRARQQSVSAQAWMQEVGKKSAWGPQS--SSRQNG-QDPVVRRFDIDDEDNDDGIGQLRSKHPQYSFDVGRGGFN 460
            +PAA++SS   +    + WGLV+ AAAT  T+A SLG + +++     + +ARVG QSL+ASPK+ GGIS+ Q  R       GR LQE+T  V TPIV+YGT+LQ+FMC+PS    G+DA+LVDE  +A+ALS + G++QAD   ITV I T P DVDD +Y+CDT G LQWHAQ++Y+ A A +RDTTPAV+AAQA DYV+YS+++FKA L   IN EY GE ETVELSA D+++P VGWIVTFPAEE V Q T+TA SSDGLA+G+G D+ LW WWVWLIYALLVAC          XXX D+K A R+RL A RKGRG EGLAKIRGPEWGITELDFEGDY+AY++QEMKREYDGAG+GV PTAY+ S HRA QQSVSAQAWMQE GKKSAW   S  SSRQ G Q PVVRRFDIDD+D DDG+G+LRSKHPQYSFDVGRGGFN
Sbjct:    1 MPAARASSSSLNPWVARNWGLVIAAAATVATVAFSLGTTASTSRSGAMTGSARVGQQSLYASPKSRGGISVAQAQRPSSVRPHGRVLQEETPTVITPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEASLAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVEYSAAYAGSRDTTPAVLAAQANDYVAYSSSQFKALLAGFINAEYAGEVETVELSADDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIGSDSSLWAWWVWLIYALLVACXXXXXXXXXXXXXADEKEAARDRLIATRKGRGEEGLAKIRGPEWGITELDFEGDYDAYQSQEMKREYDGAGRGVEPTAYRPS-HRAGQQSVSAQAWMQEAGKKSAWAQPSGNSSRQGGGQSPVVRRFDIDDDDADDGVGKLRSKHPQYSFDVGRGGFN 447          
BLAST of mRNA_L-elsbetiae_contig984.18787.1 vs. uniprot
Match: A0A835YQ53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ53_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.020e-24
Identity = 116/381 (30.45%), Postives = 164/381 (43.04%), Query Frame = 0
Query:   64 STPDVMGSSAARVGHQSLFASPKNHGGISIVQRSRGRALQEDTAVVSTPIVQYGTELQLFMCSPSQIEAGDDAYLVDETRVASALSKVDGLRQADADKITVAITTGPTDVDDNNYLCDTVGTLQWHAQIKYA---------TADATARDTTP------------AVMAAQATDYVSYSATEFKAGLTASINDE-YVGEAETVELSA-----ADVVVPNVGWIVTFPAEEPVVQNTNTARSSDGL-AIGLGGDNGLWVWWVWLIYALLVACCLVPLCCFLRXXXEDDKNATRERLDAIRKGRGAEGLAKIRGPEWGITELDFEGDYNAYENQEMKREYDGAGKGVTPTAYKASSHRARQQS-------VSAQAWMQEVGKKS 409
            ST   M + A+++   S+F+ P+       +Q    R L   T    TPI  Y  +  +F+C      A  +   V E+ V  A+  +D   +   D ++V  TT         Y C   G+ QW   + Y          TA AT    T                A++A D+V+YS   F    TA      Y   A    L A     +D+ V + GWI  F + E  V   + A S+  + ++G+ G N +W  W W+++AL V  C +PLC F+      +     E    + K R  EGL KI G E+GIT LDF+G+YN YE  +M+ EY GA       A +AS    R  S       VSA AW  E GKKS
Sbjct:   69 STQGTMAAKASKLMQMSMFSRPEP---ARQMQELASRQLASATNKQCTPI-SYEAQFNMFICPTQAGVANSNVKAVTESHVRDAVLSLDAFGKPSLDAVSVGFTTYRAP-----YKCAIAGSTQWSVSVVYRDPSYYRRHLTAVATTATNTTLSAGYVDPSSNAVTRASEANDWVTYS---FPNNSTADFRTAFYAAVAAAAGLPAGAITYSDLQVQSSGWIARFSSSEGSVPPGSLAFSTPTMMSVGIAG-NEVWPAWAWVLFALAVLACALPLCMFILKKRAAEFEEEEEGYGLL-KLRKEEGLEKIHGNEFGITNLDFDGNYNDYEEPKMQDEYAGA---TAAAASRASHGHKRMDSAGTSTVDVSATAWSNEKGKKS 432          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig984.18787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIZ6_ECTSI1.360e-18264.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQ53_9STRA2.020e-2430.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..463
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..314
NoneNo IPR availableTMHMMTMhelixcoord: 292..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig984contigL-elsbetiae_contig984:19840..23727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig984.18787.1mRNA_L-elsbetiae_contig984.18787.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig984 19683..23769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig984.18787.1 ID=prot_L-elsbetiae_contig984.18787.1|Name=mRNA_L-elsbetiae_contig984.18787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=464bp
MNRDEMSRTRRGSRRGSAVTARLVRTLPAAQSSSLHSHQTWGLVVTAAAT
FVTLAVSLGASNTSTPDVMGSSAARVGHQSLFASPKNHGGISIVQRSRGR
ALQEDTAVVSTPIVQYGTELQLFMCSPSQIEAGDDAYLVDETRVASALSK
VDGLRQADADKITVAITTGPTDVDDNNYLCDTVGTLQWHAQIKYATADAT
ARDTTPAVMAAQATDYVSYSATEFKAGLTASINDEYVGEAETVELSAADV
VVPNVGWIVTFPAEEPVVQNTNTARSSDGLAIGLGGDNGLWVWWVWLIYA
LLVACCLVPLCCFLRRRREDDKNATRERLDAIRKGRGAEGLAKIRGPEWG
ITELDFEGDYNAYENQEMKREYDGAGKGVTPTAYKASSHRARQQSVSAQA
WMQEVGKKSAWGPQSSSRQNGQDPVVRRFDIDDEDNDDGIGQLRSKHPQY
SFDVGRGGFNGAS*
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