mRNA_L-elsbetiae_contig9838.18784.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9838.18784.1
Unique NamemRNA_L-elsbetiae_contig9838.18784.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A6H5L4K1_9PHAE (GH16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4K1_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 3.150e-106
Identity = 155/190 (81.58%), Postives = 167/190 (87.89%), Query Frame = 2 
Query:   44 LLTSAALAATAAKGRAGTQR------LDGEKLILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            +L   AL A+A KG   ++R      L+ E LILNEEFDSFNLDLW+HEITMGGGGNWEFQMYGNNRTNSYVEDGKL LQPTLTSDY+G +QVSG  PTTFDMWGLVPADQCTSNMFYGCSR SN+ AR+AINPVMSARVRTAGTFSFRYGR+EVKAKLPKGDWLWPAIWLLPEQN YGQWPASGEID+M
Sbjct:   12 VLAGVALGASAGKGGGASRRGVNPRRLEEETLILNEEFDSFNLDLWQHEITMGGGGNWEFQMYGNNRTNSYVEDGKLFLQPTLTSDYMGEEQVSGVSPTTFDMWGLVPADQCTSNMFYGCSRASNMAARIAINPVMSARVRTAGTFSFRYGRMEVKAKLPKGDWLWPAIWLLPEQNVYGQWPASGEIDVM 201
[Close]
BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A4D9CN72_9STRA (GH16 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CN72_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.940e-72
Identity = 104/163 (63.80%), Postives = 131/163 (80.37%), Query Frame = 2 
Query:  107 DGEKLILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            + E L+  + F+  ++++W H+ITM GGGNWEFQ Y NNR+NS+VE+G L LQPTLT + +G   + G KP  FDMWG+ P+D CTSN FYGC R S+ GA+L INPV SAR+RT GTF+F+YGR+EV+AKLP+GDWLWPAIWLLPE+N YGQWPASGEID+M
Sbjct:  120 EAEVLVFEDTFEELDMEIWAHDITMAGGGNWEFQYYTNNRSNSFVEEGVLYLQPTLTEETIGEANMMGEKPFRFDMWGMWPSDACTSNAFYGCERISDAGAQLVINPVQSARLRTTGTFTFQYGRLEVEAKLPRGDWLWPAIWLLPEKNVYGQWPASGEIDVM 282
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BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A7S3DIZ0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DIZ0_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 8.900e-69
Identity = 106/175 (60.57%), Postives = 127/175 (72.57%), Query Frame = 2 
Query:   86 RAGTQRLDGEK----LILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGAR-LAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            RAG     G K    L+ +++FD+ N  +W+HEIT  G GNWEF+ Y NNR+NSYV D  L +QPTLTS+  G+D V      T D+WG  PADQCTSN FYGCSR +   A   AINP+ SAR+RT  +FSF+YGR+EV+AKLPKGDWLWPAIWL+PE N YGQWPASGEIDIM
Sbjct:   29 RAGVLPTTGVKDFTNLVFSDDFDTLNFSVWQHEITASGAGNWEFEYYTNNRSNSYVNDSVLYIQPTLTSETYGSDNVWNG--FTLDLWGSTPADQCTSNAFYGCSRAAQADAGGNAINPIQSARLRTVNSFSFKYGRVEVRAKLPKGDWLWPAIWLIPEHNEYGQWPASGEIDIM 201
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BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A7S3H4A6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4A6_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.990e-67
Identity = 105/189 (55.56%), Postives = 134/189 (70.90%), Query Frame = 2 
Query:   32 MKVLLLTSAALAATAAKGRAGTQRLDGEKLILNEEFDS-FNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            M  L +  A ++AT+  G   T       L+  E+F    +  +WKHEITMGGGGNWEF+ Y NNR+NS+V D  L ++PTLT+D +G  QVSG  P+T D+WG  PAD CTSN FYGCSR S  G    +NP+ SAR+RT  +FSF+YGR+E++AKLP+GDWLWPA+WLLPE  AYG WPASGEID++
Sbjct:    1 MMFLAIVLAFMSATSVVGEYST-------LVFKEDFSKGLDFSIWKHEITMGGGGNWEFEYYANNRSNSFVRDKTLFIKPTLTADRMGKQQVSGEIPSTLDLWGGTPADVCTSNAFYGCSRGS--GGGNVLNPIASARLRTVNSFSFKYGRLEIEAKLPRGDWLWPAMWLLPEDQAYGVWPASGEIDLV 180
[Close]
BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A7S3GC02_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GC02_9EUKA)

HSP 1 Score: 225 bits (574), Expect = 8.780e-67
Identity = 102/164 (62.20%), Postives = 123/164 (75.00%), Query Frame = 2 
Query:  107 DGEKLILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGAR-LAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            D   L+ +++FD+ N  +W+HEIT  G GNWEF+ Y NNR+NSYV D  L +QPTLTS+  G+D V      T D+WG  PADQCTSN FYGCSR +   A   AINP+ SAR+RT  +FSF+YGR+EV+AKLPKGDWLWPAIWL+PE N YGQWPASGEIDIM
Sbjct:   83 DFTNLVFSDDFDTLNFSVWQHEITASGAGNWEFEYYTNNRSNSYVNDSVLYIQPTLTSETYGSDNVWNG--FTLDLWGSTPADQCTSNAFYGCSRAAQADAGGNAINPIQSARLRTVNSFSFKYGRVEVRAKLPKGDWLWPAIWLIPEHNEYGQWPASGEIDIM 244
[Close]
BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A7M7PK47_STRPU (GH16 domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PK47_STRPU)

HSP 1 Score: 224 bits (570), Expect = 7.750e-66
Identity = 101/159 (63.52%), Postives = 124/159 (77.99%), Query Frame = 2 
Query:  119 LILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            LI  EEFDSFNLD+W+HE+T GGGGNWEF+ Y NNR+NSYV DGKL ++PTLT+D LG   +S     T D+WG  PA+ CT N +YGCSRT +    L  NP+ SAR+RT  +FSF+YGR+EV+AKLP GDWLWPAIWLLP+ N YG+WPASGEID++
Sbjct:   99 LIFQEEFDSFNLDIWQHEMTAGGGGNWEFEYYTNNRSNSYVRDGKLFIKPTLTTDKLGEGSLSSG---TLDLWGSSPANLCTGNAWYGCSRTGSNDNLL--NPIQSARLRTVESFSFKYGRLEVEAKLPTGDWLWPAIWLLPKHNGYGEWPASGEIDLV 252
[Close]
BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A7M7PLB8_STRPU (GH16 domain-containing protein n=3 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PLB8_STRPU)

HSP 1 Score: 224 bits (570), Expect = 5.300e-65
Identity = 101/159 (63.52%), Postives = 124/159 (77.99%), Query Frame = 2 
Query:  119 LILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            LI  EEFDSFNLD+W+HE+T GGGGNWEF+ Y NNR+NSYV DGKL ++PTLT+D LG   +S     T D+WG  PA+ CT N +YGCSRT +    L  NP+ SAR+RT  +FSF+YGR+EV+AKLP GDWLWPAIWLLP+ N YG+WPASGEID++
Sbjct:  179 LIFQEEFDSFNLDIWQHEMTAGGGGNWEFEYYTNNRSNSYVRDGKLFIKPTLTTDKLGEGSLSSG---TLDLWGSSPANLCTGNAWYGCSRTGSNDNLL--NPIQSARLRTVESFSFKYGRLEVEAKLPTGDWLWPAIWLLPKHNGYGEWPASGEIDLV 332
[Close]
BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: B2NIF1_9STRA (Glucan binding protein-2 n=2 Tax=Actinophrys sol TaxID=238771 RepID=B2NIF1_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.980e-65
Identity = 102/172 (59.30%), Postives = 122/172 (70.93%), Query Frame = 2 
Query:   80 KGRAGTQRLDGEKLILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            K  + T    GE L   +EFD+ +L LWKHEITMGGGGNWEF+ Y NNRTNS+V D  L L+PT+TSD +G  Q++G  P T D++G  P D CTS  +YGC RTSN    L  NPV SAR+RTA T  F YGR+EV AKLPKGDW+WPAIW+LP+   +G WP SGEIDIM
Sbjct:   28 KKHSNTVSRKGEVLQFEDEFDTLDLSLWKHEITMGGGGNWEFEWYTNNRTNSFVRDSVLYLKPTMTSDTIGEQQMTGVIPYTMDIYGSQPGDLCTSEAWYGCFRTSNTANIL--NPVQSARLRTADTLFFTYGRLEVNAKLPKGDWIWPAIWMLPQYQDFGSWPVSGEIDIM 197
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BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: UPI001BB27A13 (beta-1,3-glucan-binding protein-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB27A13)

HSP 1 Score: 219 bits (559), Expect = 7.270e-65
Identity = 99/159 (62.26%), Postives = 123/159 (77.36%), Query Frame = 2 
Query:  119 LILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIM 595
            LI  EEF+S NLD+W+HEIT GGGGNWEFQ Y NNR+NSYV+DGKL ++PTLT D LG   V+ A+    D+WG  PA+ CT + ++GC RT    A   +NP+ SAR+RT  +FSF+YGR+EV+AKLP GDWLWPAIWLLP +NAYG WPASGEID++
Sbjct:   42 LIFQEEFNSLNLDIWEHEITAGGGGNWEFQYYTNNRSNSYVKDGKLFIKPTLTEDLLGPGSVTSAR---LDLWGASPANLCTGHAWWGCDRTGT--ADNILNPIQSARLRTVDSFSFKYGRLEVEAKLPTGDWLWPAIWLLPTRNAYGNWPASGEIDLV 195
[Close]
BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Match: A0A7M7HEY7_STRPU (GH16 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HEY7_STRPU)

HSP 1 Score: 218 bits (555), Expect = 3.560e-64
Identity = 97/164 (59.15%), Postives = 126/164 (76.83%), Query Frame = 2 
Query:  119 LILNEEFDSFNLDLWKHEITMGGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFDMWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGRIEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIMVRECK 610
            LI  EEF+SFN D+W+HEIT GGGGNWEFQ Y NNR+NSYV+DG L ++PTLTSD+ G   +S     T D+WG  PA+ CT N ++GCSRT    +   +NP+ SAR+RT  +F+F+YGRIEV+AK+P GDW+WPAIWLLP+ + YG+WPASGEID++  EC+
Sbjct:   44 LIFQEEFNSFNFDIWEHEITAGGGGNWEFQYYTNNRSNSYVKDGSLYIKPTLTSDHYGEQFLSSG---TLDLWGASPANLCTGNAWWGCSRTGT--SANILNPIQSARIRTVESFTFKYGRIEVEAKMPTGDWIWPAIWLLPKNSGYGEWPASGEIDLV--ECR 200
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9838.18784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4K1_9PHAE3.150e-10681.58GH16 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A4D9CN72_9STRA1.940e-7263.80GH16 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S3DIZ0_9EUKA8.900e-6960.57Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S3H4A6_9STRA6.990e-6755.56Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3GC02_9EUKA8.780e-6762.20Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7M7PK47_STRPU7.750e-6663.52GH16 domain-containing protein n=2 Tax=Strongyloce... [more]
A0A7M7PLB8_STRPU5.300e-6563.52GH16 domain-containing protein n=3 Tax=Strongyloce... [more]
B2NIF1_9STRA6.980e-6559.30Glucan binding protein-2 n=2 Tax=Actinophrys sol T... [more]
UPI001BB27A137.270e-6562.26beta-1,3-glucan-binding protein-like n=1 Tax=Lytec... [more]
A0A7M7HEY7_STRPU3.560e-6459.15GH16 domain-containing protein n=1 Tax=Strongyloce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9838contigL-elsbetiae_contig9838:874..6974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score221.9
Seed ortholog evalue3.7e-55
Seed eggNOG ortholog7668.SPU_006529-tr
Preferred nameGNBPB5
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Glycosyl hydrolases family 16
EggNOG OGs2QRX5@2759,38FWG@33154,3BF4Y@33208,3D1TU@33213,COG2273@1
COG Functional cat.G
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons9
Model size1082
Cds size801
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817044.6784675-UTR-L-elsbetiae_contig9838:873..9121622817044.6784675-UTR-L-elsbetiae_contig9838:873..912Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9838 874..912 -
1691684005.3688836-UTR-L-elsbetiae_contig9838:873..9121691684005.3688836-UTR-L-elsbetiae_contig9838:873..912Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9838 874..912 -
1622817044.688748-UTR-L-elsbetiae_contig9838:1320..15311622817044.688748-UTR-L-elsbetiae_contig9838:1320..1531Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9838 1321..1531 -
1691684005.3811953-UTR-L-elsbetiae_contig9838:1320..15311691684005.3811953-UTR-L-elsbetiae_contig9838:1320..1531Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9838 1321..1531 -
1622817044.7865474-UTR-L-elsbetiae_contig9838:6943..69741622817044.7865474-UTR-L-elsbetiae_contig9838:6943..6974Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9838 6944..6974 -
1691684005.4776433-UTR-L-elsbetiae_contig9838:6943..69741691684005.4776433-UTR-L-elsbetiae_contig9838:6943..6974Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9838 6944..6974 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817044.6982126-CDS-L-elsbetiae_contig9838:1531..18471622817044.6982126-CDS-L-elsbetiae_contig9838:1531..1847Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 1532..1847 -
1691684005.3907578-CDS-L-elsbetiae_contig9838:1531..18471691684005.3907578-CDS-L-elsbetiae_contig9838:1531..1847Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 1532..1847 -
1622817044.7092023-CDS-L-elsbetiae_contig9838:2285..23591622817044.7092023-CDS-L-elsbetiae_contig9838:2285..2359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 2286..2359 -
1691684005.405046-CDS-L-elsbetiae_contig9838:2285..23591691684005.405046-CDS-L-elsbetiae_contig9838:2285..2359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 2286..2359 -
1622817044.718279-CDS-L-elsbetiae_contig9838:3209..32851622817044.718279-CDS-L-elsbetiae_contig9838:3209..3285Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 3210..3285 -
1691684005.4170585-CDS-L-elsbetiae_contig9838:3209..32851691684005.4170585-CDS-L-elsbetiae_contig9838:3209..3285Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 3210..3285 -
1622817044.7277675-CDS-L-elsbetiae_contig9838:3550..36161622817044.7277675-CDS-L-elsbetiae_contig9838:3550..3616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 3551..3616 -
1691684005.426416-CDS-L-elsbetiae_contig9838:3550..36161691684005.426416-CDS-L-elsbetiae_contig9838:3550..3616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 3551..3616 -
1622817044.738691-CDS-L-elsbetiae_contig9838:4254..43391622817044.738691-CDS-L-elsbetiae_contig9838:4254..4339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 4255..4339 -
1691684005.4358494-CDS-L-elsbetiae_contig9838:4254..43391691684005.4358494-CDS-L-elsbetiae_contig9838:4254..4339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 4255..4339 -
1622817044.7501109-CDS-L-elsbetiae_contig9838:5193..52271622817044.7501109-CDS-L-elsbetiae_contig9838:5193..5227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 5194..5227 -
1691684005.4454234-CDS-L-elsbetiae_contig9838:5193..52271691684005.4454234-CDS-L-elsbetiae_contig9838:5193..5227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 5194..5227 -
1622817044.7633455-CDS-L-elsbetiae_contig9838:5824..58951622817044.7633455-CDS-L-elsbetiae_contig9838:5824..5895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 5825..5895 -
1691684005.456528-CDS-L-elsbetiae_contig9838:5824..58951691684005.456528-CDS-L-elsbetiae_contig9838:5824..5895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 5825..5895 -
1622817044.7745593-CDS-L-elsbetiae_contig9838:6864..69431622817044.7745593-CDS-L-elsbetiae_contig9838:6864..6943Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 6865..6943 -
1691684005.467249-CDS-L-elsbetiae_contig9838:6864..69431691684005.467249-CDS-L-elsbetiae_contig9838:6864..6943Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9838 6865..6943 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9838.18784.1prot_L-elsbetiae_contig9838.18784.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9838 1532..6943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9838.18784.1

>prot_L-elsbetiae_contig9838.18784.1 ID=prot_L-elsbetiae_contig9838.18784.1|Name=mRNA_L-elsbetiae_contig9838.18784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp
MKVLLLTSAALAATAAKGRAGTQRLDGEKLILNEEFDSFNLDLWKHEITM
GGGGNWEFQMYGNNRTNSYVEDGKLVLQPTLTSDYLGADQVSGAKPTTFD
MWGLVPADQCTSNMFYGCSRTSNLGARLAINPVMSARVRTAGTFSFRYGR
IEVKAKLPKGDWLWPAIWLLPEQNAYGQWPASGEIDIMVRECKSTFQRTC
WTYRTHAACLLVIQYIFRSTQAACLLLIQSTYFAGKCVPSSFRFGLVFVL
LLRFFVRFCGSSSNSV*
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mRNA from alignment at L-elsbetiae_contig9838:874..6974-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9838.18784.1 ID=mRNA_L-elsbetiae_contig9838.18784.1|Name=mRNA_L-elsbetiae_contig9838.18784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6101bp|location=Sequence derived from alignment at L-elsbetiae_contig9838:874..6974- (Laminarionema elsbetiae ELsaHSoW15)
TGACTTTCGTAGCTCGCCACGAAGCAGCTGGATGAAGGTACTTCTGCTCA
CGAGTGCAGCTCTCGCGGCGACCGCCGCCAAGGGACGCGCTGGCACACAG
CGCTTAGATGGTACGGTATGTGCGTACCTATGTATGTGTATTGTGCCCAC
GGTGGTGTGTACAGAGTACGTACAACCTTTTGGGTGACGCTCGGAGCGTG
GAAGTATAGTGTGTGCGTGTGTGCGGTGGTGTGGACTGCTTTCAGTCGCT
CCTCCTGTCGTTGTCCGATCTCGAACAGCGGGCTACGCATGTACGTACAT
AAGGAACCACTTGTGTGTGTGTCTGTCACACTTGCTCCTTCTGTGTTATG
TATGTCTCTACATATGTTGGGCATGGCAAAGTCAAGCAGACGTATCTAAG
GATGTACCACGTACCACGTACACATGTACTCACCTACTTTTCTGCAGTTG
GTGATTTCCCTCGGGGTGGTTGTGAAAAGGGCGAGGATGAGGCCTGTTGT
CTTTCTTATCCACGTTGAAAATCCCCAGAAACCAAAAAAGTTATCGGGGA
AACGAGGGAGACTACTGTTTGTCTCAAATTATCAGTTAGTTGGCCAGTGA
AGGACGTTTAACAGCGATATTGGAGCAGGGCTGCTGCTGCTGCTGTGTAC
CCTTGGACGGGGCTGCAGCCCCTCATCAGCGACAATTTACCATACACAGC
TCTGATGTACAACTAACTCGTATATACCATAGATGTCTTATATGACTTCT
TCATTTTCGAAACACCTGAGTGCCTCTCTCGAAGCGGGCAACTGCTCAAG
GGGGGTGTTTCACCGAAAAAAATGACGCACAAGCCATAATATTTCGGATG
TGCCTCTCTCTCCTTGATTCCGAGCACGCTCTTATATCACAAGATGCTTT
TGGGTCCTACTTGCCAAGCAGGAAAAACAGGAGGTGGTTCTCCGAGATGT
TTCGAAAAATTTAGGTTGTTTCTTCCCCAAGTCACACTCACACTCCGCCG
ATCCCCTCCCCCTCCCCTCCCCTCGCTACGCTTGTTTGTATTTCTTGTTC
GCCTTTGTCCGTGTTGCGTTCTTCAACAGGCGAAAAACTAATTCTGAACG
AAGAGTTTGACAGCTTCAATCTTGATCTGTGGAAGCACGAGATAACCATG
GTGAGAGCACATGCGGGAGGCAGCTAGATAACCGCGTCGGAGCGATCCCA
CTGTAGCGACAGGTCCGGAAAGACAGAAAAGACTCGGAACCGCAGCGTTG
GCCGATGGCTGGCCAGGGGCGGGGGCATAATAGGGGAGTGGATTGGGGGA
CAGAGGAGGTGAAGTCGATGGAGCGAGAGAGGAACGGAGGGAAAGAGAGG
CAGAGAGAGAGAGAGAGAGACGGCGAGAGAGAGGGAGGGAGACTGAAGGA
AAAAATATGTCGAGACGGCCGAGATGCATGTACATATGTATACATCGACC
ATTGCACAGACAGGGGAGGGACGGTTGTTACTGCTGGTCTGCTGCAGTTC
GCGGCGGGAGAGGGGGGCCAGGGTGGGGCAGGGTGGGCTGGGCGGCGCTG
GGGGTGGTCTGATGAAGCTTGGTCAGGAGAGCATGCCGAGAATTATTACA
ACGGTTTTTTTTTGTTATGTAGAAGATTGAGTCACCCCCAGCAAAGCCTT
CCTCGTGGTGAAAATAAAATGCTTACATCGAATCACCCACCCCACGGGGA
CCCTCTCACCCCCTACTCCCCGCCCTCCCTCTTTCTGTTCCCTGCAGGGA
GGAGGAGGAAACTGGGAGTTCCAAATGTACGGTAAGTTGCGATTTGAGAC
GCCCGCCCTACATATGTTTTGTTATCTGTGCGATGTTTTTCGTTGCCTCT
GCTCCTTTCTCAGCAAGATCTCCCAGGCGCGCGAGCACCCTAGTGTGTAG
CCTTCCTTCGCTCATCTCGCGTTTTTGTTTCCAGCACCGGAGGAGTGTTT
GTTGCCGCGCTTCATGTCCGCGATGCAACCAACGGGCAGCAGGCGCCGCC
GCCGCGGGTTTTCAGCGTGTGGTCTGCAGCCGGTTGGGGCCTCGCAATCG
GCGGCAGTTTTTTGTTGCAGTATGTAGCTCATGTTGTAGCAGCACCCCGT
TAGCGCGACTCTGTTGTAGTGTTTGATAAAAAAGTGGTCACGCGCGAGCT
CCAGCACCCCCGTCAGCGCGACTCTGTTGTAGTGCCTGATAAAAAGTTGT
CACGCGCGAGCTCCAGCACCCCCCCGTCAGCGCGACTCTGTTGTAGTGTT
TGATAAAAAGTGGTCACGCGCGAGCTCGCGAGGGAGTCGGGTCGATAGGA
AAAGAGCCCCCGGGAACAAAGAGGTCAAGGCAGAAAACAACTGGACACTA
TGAGTTTCGAGCATTGGTGGTATTGCGGCCCTCTCCGGGCTAGAGAGAAG
AGAGTGGAGGCCCAACACCAGCCCGACAGATTATTTCTGCTTACCGCCTC
GGAACAATGGCAAATGGTTGTGGTAGTTTTTACGGGGCTGTTGCTGACGC
TAACGAGCGTGTCACGTGCTACTCTGCTGCTGGGAATCTGACTTTTTTGG
CTGCTCCTGGCATTGTTGTCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTCTTTTTCCGTGTGGCAGGCAACAACCGGACGA
ACTCGTACGTGGAAGACGGCAAGCTGGTCCTGCAGCCGACGCTAACCTCC
GACTATCTCGGGGCAGACCAGTTGAGCAACGTTGTCGGAACAGTGCTACA
CTGACATTGATTGCTTCTGCATACAACCTCCTACAACACTTGCTCAGCCG
TGCATGTTCGTTGCCCTGCTTTTGGGGAACCAGAGTTGTTGTTGGGGCGC
CAGATGAGGATGATAAAAAATGTCTGTTCCGTCTTTTAAGTTGCGGTGAA
GAGTGGAGCATCTCTCTCTCTGTGTGTATTACCGGACATAGCAAAATGTT
GCCCCCCTCTGACTTTCCTTCTCTGTCTGCACGTATCTCGTACATTGTCA
GACTAAAATGGAGGCCTCTCGCAATCCCTTTGTGGCTCCGCCCCCCCCCC
CCCTACTCCCTCTCCTCTCTCTGTCTCTCTCGCCGCGCGAAAATAACAAA
GACAGCAAGCTGGAGAAAAACGTTTTGTCTCGCCTTGTCCTGCTTATCTC
CTTGCCGGGAGGAACAGGGCTTCCGGCAGGCTGCCCATCTTTTATCTTGC
GGCTTGCTGACCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGGTGCTGTTCTCGATTGCTGCTGCTGTGCTTTCCCTCTCCCTCTCG
TCCCCTCTCTCCCCTCCCCCCCCCTCTCTCCCTCCCGCTCTCTGGCTCTC
ACTCGCAGGGTTAGCGGGGCAAAGCCAACCACGTTCGATATGTGGGGGCT
TGTCCCCGCCGATCAGTGCACGAGGTGGGTGTTGGCGGTGGTGGTCGTGT
TGGCCAGGTGTGATGTCGATTCCATGCCGTTGTAGATATCGAGTTTCATC
TCAAGAGGGGCCCGCCACGGCTGCTAAATAGGGCTGGTAGTGATAATGAG
GGACCTCGGGGGTGGCGTGTCTGCTGTTTCCGCGTCTACTGGTAGGGGCT
TCCACACATGGCTAATGTTCGTCCGTACACACCACCGACCGCCGACCGCC
ATACATCTGTTCCTTTTCACCCCTGCTTCACGACCGCAGCAACATGTTCT
ACGGGTGCTCTCGCACGAGCAACCTTGGGGCCCGGCTAGCGATCAACCCC
GTTATGTCGGCCAGGGTAAGCTATTTTCGTCTGTCGGTGCAAAGCTGAGG
CAGGCTTAATTTGTACTCACGCCGGGCGCTGTTTTATTACCCAGGCTTGA
TGGGTAAATGTCTGTCGCGTACGCCTTTGCTTGAATGAATAGTCTTTTAT
GACTGCCGAGAACCAGAGGCAGGAATTATCTTTGGCCCCCGAGTGAAGTG
GATGGAGTGTTGTCTTCGTGGTTCCTTTACAGCACACGCTTCCCCAGTAA
ATACCCGCTCTTGCTGCGAGCATGTTCCCGCGAACGTGCAGCACTTGTTC
TGACTGACTCGTTCCACTGTCTTTTTCTGTCTTTGACGTCGAACGGCCAA
GACCCATCCCTTTCCCCCAGGCATTCCGACTTTACTTGGGATATTAATGG
TGGTTTGTGTTGTGTTGGCACGTGCCTCTCTTTGGCCGCGGTGATGATGT
TGTGCCCAACAACGGAGCAAGCGATATATAGGCACCTGCCAGCCTGCGTA
CCCCGTCATTTACAGATTTCCAAGAAGCAAGACATGTGTGCCAACTTGTT
TTGGTCACAAAGCGCTCGTGGACGTGTCATCATGGAAACTTTTTATTTTA
TTTTGCACGTTGTGCCAGAAGCCACGAAGAACAAACTACAAACAAATGCG
TGCCTTTTCTCACTACTTGCTCTCTCTCTCTCTCGAGTAAATACTACAGG
GACGATCCTCCAAGTGCTAGCTCGTGTTTTGTGTTTTCAGCGGATGTGGT
GTGATAGTGACAACTCTCTCGTGTCCGGGTGGTGTTCATCGCGAGCTGTT
TGCAAGTGTGGCCCCCGTTCTTAAGGCGTTCCTTGTGGTACAAATTCTTG
TATGGATGCATGCAGGTGAGGACCGCGGGGACATTTTCGTTCCGCTACGG
GCGTATCGAGGTCAAGGCCAAGCTTCCAAAGGGAGACTGGTACGAGCAGC
GTGCAGAGAAGAGATGGAAGAAGTCTGTATTTTGCGTTCGTGCTGTTTTC
TTCGCCCTTGCCGTGTATGTATGTGGTGGTGATGTTGATGTTGTCTCCAC
GTTTTACAGTCATTCTGGCCCTCTTCGGCTGTGCTCAAAGCAAGTAAGAT
AGACGAGATGAGAGAGACAGAGAGCAAAATTGCCGCGTCCACAAGAAGAA
AAAGAACGAACAAGTTGCAGTCACCAAACCCCTCGCACGAATACTCTCAA
CCGCGCGAAGTGCCACAAAAGAGACGAAGCGCCAGAGCAAGATATGACGA
GGCCAAGCCTTGCTGCTATGCCCGGTCGCTTTCTTGTATCTCCCTATTGA
TATTGTCTTTTCGTGGCCCCTGACCCTGTGTTTCTCACAACCTCTCTCTG
TTCGTGCGCCGAACATAAAAAACACAGGCTGTGGCCAGCTATCTGGCTCC
TCCCGGAACAAAACGCCTACGGCCAATGGCCCGCATCGGGAGAAATCGAT
ATCATGGTAAGAGAATGTAAATCCACATTCCAACGTACATGCTGGACTTA
CCGCACACACGCAGCATGCTTGCTCGTCATACAGTACATATTTCGCAGCA
CGCAGGCAGCATGTTTGCTCCTCATACAGAGTACATATTTCGCAGGAAAA
TGTGTTCCTTCGTCTTTTCGATTTGGGCTTGTATTTGTTTTGTTGTTGCG
TTTCTTCGTTCGTTTTTGCGGCAGCAGTAGCAACAGCGTCTAGCCTGCCG
TTCTCCCAGCTGAAACATGCCCACACAGAGTAAAAGGAAACGGCGACGCG
GGGTATGAACGGTGTGTGTGTGGAAGAGCAACCGCCACAGACGTGCGGAG
CAAATCGATGGCCGATAAATGGGAAAACACTCTATGTTTATCAATTTCAT
CGTCAACCGTAGCCAACGCGGTGGAGGATCAAGGAGCTCACGACGATTCA
TGAGGTGGGGGGGACGGGGGGGGGGGGGGGGAAAAGGGGGAGGACCAGTG
GATTGCAAAAAAAAGGACCAAACACCCCGCAGCCCANNNNNNNNNNACAT
ATTATTTAACATGATTTATATACGAAGGCGGAGCGAGGGGGGGGGAGGGT
AGGGGAGGCGCCGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGCGAATAGGAGTCAGCGCAGTAGATTGCAACAAAAAGGCACACACAACA
CGCAGTCCATGCCGATAACACAAGACACACGCTACACGGTGCTATTGCTG
TTCCGCCCCGAGACCGGTGTATTTCGATGGTTTGACAGTGATCTGCTTTA
GCCCGGTCGATGCTTAAATCCATGTGTATGTACATGCGCACACAACCACG
TGCCGCACGCAGGAGTCGAGAGGGAACTCGCCGTCCTACGCCGCTGGGGA
C
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9838:874..6974-

>mRNA_L-elsbetiae_contig9838.18784.1 ID=mRNA_L-elsbetiae_contig9838.18784.1|Name=mRNA_L-elsbetiae_contig9838.18784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1602bp|location=Sequence derived from alignment at L-elsbetiae_contig9838:874..6974- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGTACTTCTGCTCACGAGTGCAGCTCTCGCGGCGACCGCCGCCAA
GGGACGCGCTGGCACACAGCGCTTAGATGATGAAGGTACTTCTGCTCACG
AGTGCAGCTCTCGCGGCGACCGCCGCCAAGGGACGCGCTGGCACACAGCG
CTTAGATGGCGAAAAACTAATTCTGAACGAAGAGTTTGACAGCTTCAATC
TTGATCTGTGGAAGCACGAGATAACCATGGCGAAAAACTAATTCTGAACG
AAGAGTTTGACAGCTTCAATCTTGATCTGTGGAAGCACGAGATAACCATG
GGAGGAGGAGGAAACTGGGAGTTCCAAATGTACGGGAGGAGGAGGAAACT
GGGAGTTCCAAATGTACGGCAACAACCGGACGAACTCGTACGTGGAAGAC
GGCAAGCTGGTCCTGCAGCCGACGCTAACCTCCGACTATCTCGGGGCAGA
CCAGCAACAACCGGACGAACTCGTACGTGGAAGACGGCAAGCTGGTCCTG
CAGCCGACGCTAACCTCCGACTATCTCGGGGCAGACCAGGTTAGCGGGGC
AAAGCCAACCACGTTCGATATGTGGGGGCTTGTCCCCGCCGATCAGTGCA
CGAGGGTTAGCGGGGCAAAGCCAACCACGTTCGATATGTGGGGGCTTGTC
CCCGCCGATCAGTGCACGAGCAACATGTTCTACGGGTGCTCTCGCACGAG
CAACCTTGGGGCCCGGCTAGCGATCAACCCCGTTATGTCGGCCAGGCAAC
ATGTTCTACGGGTGCTCTCGCACGAGCAACCTTGGGGCCCGGCTAGCGAT
CAACCCCGTTATGTCGGCCAGGGTGAGGACCGCGGGGACATTTTCGTTCC
GCTACGGGCGTATCGAGGTCAAGGCCAAGCTTCCAAAGGGAGACTGGTGA
GGACCGCGGGGACATTTTCGTTCCGCTACGGGCGTATCGAGGTCAAGGCC
AAGCTTCCAAAGGGAGACTGGCTGTGGCCAGCTATCTGGCTCCTCCCGGA
ACAAAACGCCTACGGCCAATGGCCCGCATCGGGAGAAATCGATATCATGG
TAAGAGAATGTAAATCCACATTCCAACGTACATGCTGGACTTACCGCACA
CACGCAGCATGCTTGCTCGTCATACAGTACATATTTCGCAGCACGCAGGC
AGCATGTTTGCTCCTCATACAGAGTACATATTTCGCAGGAAAATGTGTTC
CTTCGTCTTTTCGATTTGGGCTTGTATTTGTTTTGTTGTTGCGTTTCTTC
GTTCGTTTTTGCGGCAGCAGTAGCAACAGCGTCTAGGCTGTGGCCAGCTA
TCTGGCTCCTCCCGGAACAAAACGCCTACGGCCAATGGCCCGCATCGGGA
GAAATCGATATCATGGTAAGAGAATGTAAATCCACATTCCAACGTACATG
CTGGACTTACCGCACACACGCAGCATGCTTGCTCGTCATACAGTACATAT
TTCGCAGCACGCAGGCAGCATGTTTGCTCCTCATACAGAGTACATATTTC
GCAGGAAAATGTGTTCCTTCGTCTTTTCGATTTGGGCTTGTATTTGTTTT
GTTGTTGCGTTTCTTCGTTCGTTTTTGCGGCAGCAGTAGCAACAGCGTCT
AG
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