prot_L-elsbetiae_contig9793.18747.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9793.18747.1
Unique Nameprot_L-elsbetiae_contig9793.18747.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length284
Homology
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BLAST of mRNA_L-elsbetiae_contig9793.18747.1 vs. uniprot
Match: D8LME0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME0_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 2.710e-166
Identity = 238/283 (84.10%), Postives = 250/283 (88.34%), Query Frame = 0 
Query:    1 QSVEQIVVTPDGSKLITLGSRGLGTGTFGVFSISANGDLELLQEDDHRGIIRAAFPDSSSRDMYAIDDDRSVLTHYTYDGGRFVVSQTVGGFTCVYGLGVAPDGRNVYVTDDCLYTVTNFRRDPETGSLAFESELTGDPRNGDGLGCLKSLSFTADGMWAVGLDSCDDVISILKRDLDTGTLTPTSLISTINPDGNTINIDQASATLCAPCMTWGALVVSDGSGDIYVADWSDQNILWVRADFGVGGDGSAIGTSWFSLPFKPSTLVVSRDLQTVYAANKVGD 283
            QSVEQIVVTPDGSKLITLGSRGLG GTFGVFSISA+GDL+LLQEDDHRGIIRA FPDSSSRD+YAIDDDRSVLTHYTYDG RFVVSQTVGGFTC+YGLGVAPDG NVYV DDCLYTVTNFRRDP+TGSL F+ EL+GDPRNGDGLGCLKSLSFT DG W VGLDSCDDVISILKRDLDTGTLTPT+LI+T NPDGNTINID+          TW ALVVSDG GDIYVADWSD  ILWVRADFGVGGDGS I T+WFSL FKPSTL+ S DLQTVY ANK  D
Sbjct:  114 QSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDK----------TWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKEND 386
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9793.18747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME0_ECTSI2.710e-16684.10TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..200
e-value: 4.1E-12
score: 47.9
NoneNo IPR availableSUPERFAMILY63829Calcium-dependent phosphotriesterasecoord: 2..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9793contigL-elsbetiae_contig9793:221..6378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9793.18747.1mRNA_L-elsbetiae_contig9793.18747.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9793 221..6378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9793.18747.1 ID=prot_L-elsbetiae_contig9793.18747.1|Name=mRNA_L-elsbetiae_contig9793.18747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
QSVEQIVVTPDGSKLITLGSRGLGTGTFGVFSISANGDLELLQEDDHRGI
IRAAFPDSSSRDMYAIDDDRSVLTHYTYDGGRFVVSQTVGGFTCVYGLGV
APDGRNVYVTDDCLYTVTNFRRDPETGSLAFESELTGDPRNGDGLGCLKS
LSFTADGMWAVGLDSCDDVISILKRDLDTGTLTPTSLISTINPDGNTINI
DQASATLCAPCMTWGALVVSDGSGDIYVADWSDQNILWVRADFGVGGDGS
AIGTSWFSLPFKPSTLVVSRDLQTVYAANKVGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf