mRNA_L-elsbetiae_contig9666.18640.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: D7FP48_ECTSI (DEAD box helicase similar to CG7922-PA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP48_ECTSI) HSP 1 Score: 222 bits (566), Expect = 5.340e-64 Identity = 110/143 (76.92%), Postives = 122/143 (85.31%), Query Frame = 1 Query: 4 LHTFRRTVHEKGNEHMAGEVEAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSIKHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITE-FLAGE 429 LH FRR+VHE GNEH+AGEVEAEM VL +VMQAKDTLVTHG AGCL+KL ME+ + RGIRS+AERG+F HEAWPGLMKLLRQT E T G S+KHPKLIKLKEVLREHFARH+AGGKSTRAIVFTQ RDSVE + F +GE Sbjct: 365 LHAFRRSVHENGNEHIAGEVEAEMGVLTKVMQAKDTLVTHGVAGCLHKLENMEKEVKVRGIRSNAERGVFRHEAWPGLMKLLRQTVETTAGASVKHPKLIKLKEVLREHFARHEAGGKSTRAIVFTQLRDSVEAVVRAFFSGE 507
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: A0A6H5KT28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT28_9PHAE) HSP 1 Score: 199 bits (506), Expect = 7.610e-57 Identity = 109/172 (63.37%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 4 LHTFRRTVHEKGNEHMAGEVEAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSIKHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAGEELLRVKPFIGQGNSTGAKARAAAAEAAKLK 519 L FRR+VHE GNEH+AGEVEAEM VLN+VMQAKDTLVTHG AGCL+KL ME+ RGIRS+AERG+ HEAWPGLMKLLRQT E T G S+KHPKL EITEFLAGEELLRVKPFIGQGNSTGAKARAAA EA +K Sbjct: 373 LQAFRRSVHENGNEHIAGEVEAEMGVLNKVMQAKDTLVTHGVAGCLHKLENMEKDVNVRGIRSNAERGVLRHEAWPGLMKLLRQTVETTAGASVKHPKL----------------------------------EITEFLAGEELLRVKPFIGQGNSTGAKARAAAVEAEAVK 510
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: A0A3M6VI26_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VI26_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 7.470e-21 Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 64 EAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSIKHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNSTGAK 483 E+++A+L ++ AK L+ HG + +++ E RKRG S ++R + H + L L TA ++ S HPKL+KL+EVL EHF RH G STRAIVFTQ+R SV EI L LL V+PFIGQG S AK Sbjct: 491 ESDLALLVSLLHAKSLLIGHGLSSFCDQIMNWVE-ERKRGKMSWSKREMLHSSDFQSLELSLAVTASSSSTAS--HPKLVKLREVLLEHFQRHVVGKSSTRAIVFTQYRASVSEIVALLRPLAPLLNVQPFIGQGASGKAK 628
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: W2QKT9_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2QKT9_PHYPN) HSP 1 Score: 97.1 bits (240), Expect = 3.480e-20 Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 13 FRRTVHEKGNEHMAGEVEAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAE-NTEGVSIKHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNSTGAK 483 FR++ + N E+++A+L ++ AK L HG + +++ E RK+G S ++R + + L L T + N+ + HPKL+KL+EVL EHF RH AGG STRAIVFTQ+R SV EI L LL V+PFIGQG S AK Sbjct: 464 FRKSPNYASNR----SAESDLALLVSLLHAKSLLTGHGLSSFRDQIVNWIE-ERKKGKMSWSKREMLQSSEFQALEASLAVTDDSNSSSNTNSHPKLVKLREVLLEHFQRHAAGGSSTRAIVFTQYRASVSEIVALLRPLAPLLNVQPFIGQGASGKAK 617
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: M4BYH3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYH3_HYAAE) HSP 1 Score: 97.1 bits (240), Expect = 3.490e-20 Identity = 67/158 (42.41%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 13 FRRTVHEKGNEHMAGEVEAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSIKHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNSTGAK 483 FR++ + + N E+++A+L ++ AK L HG + +++ E RK+G S ++R + H + L L TA +T+G S HPKLIKL+EVL EHF R AG +TRAIVFTQ+R SV EI L LL V+PFIGQG S AK Sbjct: 437 FRKSPNYESNR----SAESDLALLVSLLHAKSLLTGHGLSSFQDQITNWVE-ERKKGKMSWSKREMLHSSEFQSLELSLAATA-STDG-SASHPKLIKLREVLLEHFKRRAAGKSNTRAIVFTQYRASVSEIVALLRPLAPLLNVQPFIGQGASGKAK 587
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: A0A6A4EXG4_9STRA (Fanconi anemia group M protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EXG4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.640e-19 Identity = 60/142 (42.25%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 64 EAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSI-KHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNSTGAK 483 E+++A+L ++ AK L+ HG ++ E RK+G S ++R + + L L T + + + HPKL+KL+EVL EHF RH A G STRAIVFTQ+R SV EI L LL V+PFIGQG+S AK Sbjct: 475 ESDLALLVSLLHAKSLLIGHGLTSFREQILNWTE-ERKKGKMSWSKREMLQSSEFQSLELSLGVTEDASSSTNTASHPKLVKLREVLLEHFQRHAAAGSSTRAIVFTQYRASVSEIVSLLRPLAPLLNVQPFIGQGSSGKAK 615
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: G4Z323_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z323_PHYSP) HSP 1 Score: 93.6 bits (231), Expect = 5.190e-19 Identity = 59/138 (42.75%), Postives = 80/138 (57.97%), Query Frame = 1 Query: 64 EAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSI-KHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNS 471 E+++A+L ++ AK L HG + +++ E RK+G S ++R + + L L T T + HPKL+KL+EVL EHF RH A G STRAIVFTQ+R SV EI L LL V+PFIGQG+S Sbjct: 497 ESDLALLVSLLHAKSLLTGHGLSSFRDQILNWAE-ERKKGKMSWSKREMLQSSEFQSLELSLGVTEGATSSANTASHPKLVKLREVLLEHFQRHSAAGSSTRAIVFTQYRVSVSEIVALLRPLSPLLNVQPFIGQGSS 633
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: A0A833SYU5_PHYIN (PHD-zinc-finger like domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SYU5_PHYIN) HSP 1 Score: 93.6 bits (231), Expect = 5.620e-19 Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 1 Query: 13 FRRTVHEKGNEHMAGEVEAEMAVLNRVMQAKDTLVTHGAAGCLNKLAK-MEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAE-NTEGVSIKHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNSTGAK 483 FR++ + N E+++A+L ++ AK L HG + +++ MEE RK+G S ++R + + L L T + N+ + HPKL+KL++VL EHF RH AGG STRAIVFTQ+R SV EI L LL +PFIGQG + AK Sbjct: 475 FRKSPNYASNR----SAESDLALLVSLLHAKSLLTGHGLSSFRDQIMSWMEE--RKKGKMSWSKREMLQSPEFQALEASLAVTDDSNSSSNTNSHPKLVKLRQVLLEHFQRHSAGGSSTRAIVFTQYRASVSEIVALLRPLAPLLNAQPFIGQGATGKAK 628
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: A0A225WMJ0_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMJ0_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.790e-18 Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 64 EAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSI-KHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNS 471 E+++A+L ++ AK L HG + +++ RK+G S ++R + + L L T +N+ HPKL+KL+EVL EHF RH AG STRAIVFTQ+R SV EI L LL V+PFIGQG + Sbjct: 499 ESDLALLVSLLHAKSLLTGHGLSSFRDQIMNWAG-ERKKGKMSWSKREMLQSSEFQSLELSLAVTTDNSNSTKAGSHPKLVKLREVLTEHFQRHAAGESSTRAIVFTQYRASVSEIVALLRPLAPLLNVQPFIGQGKA 635
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Match: H3G6N5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6N5_PHYRM) HSP 1 Score: 91.3 bits (225), Expect = 2.870e-18 Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 13 FRRTVHEKGNEHMAGEVEAEMAVLNRVMQAKDTLVTHGAAGCLNKLAKMEEVARKRGIRSSAERGLFHHEAWPGLMKLLRQTAENTEGVSIKHPKLIKLKEVLREHFARHKAGGKSTRAIVFTQFRDSVEEITEFLAG-EELLRVKPFIGQGNSTGAK 483 FR++ + N E+++A+L ++ AK L HG + ++ E RK+G S ++R + + L L T + HPKL+KL+EVL EHF RH G STRAIVFTQ+R SV EI L LL +PFIGQG S AK Sbjct: 259 FRKSPNYSSNR----SAESDLALLVSLLHAKSLLTGHGLSSFREQIMSWGE-ERKKGKMSWSKREMLQSTEFQALELSLAVTPGTNISTTASHPKLVKLREVLLEHFQRHAVGKSSTRAIVFTQYRASVSEIVALLRPLAPLLSAQPFIGQGASGKAK 411 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9666.18640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9666.18640.1 >prot_L-elsbetiae_contig9666.18640.1 ID=prot_L-elsbetiae_contig9666.18640.1|Name=mRNA_L-elsbetiae_contig9666.18640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=173bp CLHTFRRTVHEKGNEHMAGEVEAEMAVLNRVMQAKDTLVTHGAAGCLNKLback to top mRNA from alignment at L-elsbetiae_contig9666:2701..4641- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9666.18640.1 ID=mRNA_L-elsbetiae_contig9666.18640.1|Name=mRNA_L-elsbetiae_contig9666.18640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1941bp|location=Sequence derived from alignment at L-elsbetiae_contig9666:2701..4641- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9666:2701..4641- >mRNA_L-elsbetiae_contig9666.18640.1 ID=mRNA_L-elsbetiae_contig9666.18640.1|Name=mRNA_L-elsbetiae_contig9666.18640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1038bp|location=Sequence derived from alignment at L-elsbetiae_contig9666:2701..4641- (Laminarionema elsbetiae ELsaHSoW15)back to top |