mRNA_L-elsbetiae_contig9640.18621.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: D8LQ01_ECTSI (Structural maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI) HSP 1 Score: 296 bits (757), Expect = 6.530e-90 Identity = 156/183 (85.25%), Postives = 160/183 (87.43%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQFQQQQQQG-----------QDRGDPKARAATKAPGVLGDATNAMRGAEV 516 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQ QQ +++G KAR A KAPGVLGD TNAMRG E+ Sbjct: 1262 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQQQQXXXXXXXXXXXXXXXXEEKGGAKARTALKAPGVLGDPTNAMRGTEM 1444
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0AC05_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AC05_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.350e-82 Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 390 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKT+N TKSVTI+PK Sbjct: 7 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTNNCTKSVTIDPK 136
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0C203_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C203_9STRA) HSP 1 Score: 252 bits (644), Expect = 3.180e-82 Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 390 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKT+N TKS+TINP+ Sbjct: 106 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTNNCTKSITINPR 235
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0PHH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PHH8_9STRA) HSP 1 Score: 249 bits (635), Expect = 4.720e-82 Identity = 123/130 (94.62%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 390 QMITLGGDAELELVDSLDPFSEG+VFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQF+IISLRNNMFELADRLVGIYKT++ TKSVTINP+ Sbjct: 16 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFVIISLRNNMFELADRLVGIYKTNDCTKSVTINPR 145
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S3GXG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXG2_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.190e-81 Identity = 122/130 (93.85%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 390 QMITLGGDAELEL+DSLDPFSEGIVFSVRPP+KSWKNI+NLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIK+RTK+AQFIIISLRNNMFELADRLVGIYKTH+ TKSVTINPK Sbjct: 21 QMITLGGDAELELLDSLDPFSEGIVFSVRPPRKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKDRTKDAQFIIISLRNNMFELADRLVGIYKTHDATKSVTINPK 150
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S1ZB93_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB93_TRICV) HSP 1 Score: 249 bits (637), Expect = 1.030e-80 Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 390 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKT+N TKSVTI+P+ Sbjct: 149 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTNNCTKSVTIDPR 278
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: UPI00077A7825 (structural maintenance of chromosomes protein 4-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7825) HSP 1 Score: 244 bits (624), Expect = 1.350e-80 Identity = 121/129 (93.80%), Postives = 126/129 (97.67%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINP 387 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI+NLSGGEKTLSSLALVFALHH+KPTP YVMDEIDAALDF+NVSIVANYIKERTKNAQF+IISLRNNMFELADRLVGI+KT N TKSVTINP Sbjct: 25 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPFYVMDEIDAALDFRNVSIVANYIKERTKNAQFVIISLRNNMFELADRLVGIFKTDNCTKSVTINP 153
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0RTU6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RTU6_9CHLO) HSP 1 Score: 244 bits (622), Expect = 4.070e-80 Identity = 130/160 (81.25%), Postives = 136/160 (85.00%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQFQQQQQQGQDRGD---PKARAATKAP 471 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI NLSGGEKTLSSL+LVFALHH+KPTPLYVMDEIDAALDFKNVSIVA+YIKERTKNAQF+IISLRNNMFELADRLVGIYKT N TKS+ INP Q G D + PKA A KAP Sbjct: 10 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNICNLSGGEKTLSSLSLVFALHHYKPTPLYVMDEIDAALDFKNVSIVAHYIKERTKNAQFVIISLRNNMFELADRLVGIYKTDNTTKSIAINPGRF-------QVGADATNTAAPKALPAGKAP 162
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: F0YFH8_AURAN (SMC_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFH8_AURAN) HSP 1 Score: 243 bits (620), Expect = 5.660e-80 Identity = 128/166 (77.11%), Postives = 139/166 (83.73%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQFQQQQQQGQDRGDPKARAATKAPGVLGDATNA 498 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALD+KNVSI+ANYIK+R ++AQF+IISLRNNMFELADRL G+YKTHNVTK++TI+P Q ARA AP L DATNA Sbjct: 3 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDYKNVSIIANYIKDRCRSAQFVIISLRNNMFELADRLTGVYKTHNVTKTITISPDAFAATLAQ-----------ARAPA-APSPLRDATNA 156
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S3PBM4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PBM4_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.240e-79 Identity = 123/130 (94.62%), Postives = 128/130 (98.46%), Query Frame = 1 Query: 1 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 390 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI+NLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIKERT+NAQF+IISLRNNMFELADRLVGIYKT N TKSVTINP+ Sbjct: 141 QMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERTRNAQFVIISLRNNMFELADRLVGIYKTDNCTKSVTINPR 270 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9640.18621.1 >prot_L-elsbetiae_contig9640.18621.1 ID=prot_L-elsbetiae_contig9640.18621.1|Name=mRNA_L-elsbetiae_contig9640.18621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLback to top mRNA from alignment at L-elsbetiae_contig9640:4211..6928- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9640.18621.1 ID=mRNA_L-elsbetiae_contig9640.18621.1|Name=mRNA_L-elsbetiae_contig9640.18621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2718bp|location=Sequence derived from alignment at L-elsbetiae_contig9640:4211..6928- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9640:4211..6928- >mRNA_L-elsbetiae_contig9640.18621.1 ID=mRNA_L-elsbetiae_contig9640.18621.1|Name=mRNA_L-elsbetiae_contig9640.18621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1032bp|location=Sequence derived from alignment at L-elsbetiae_contig9640:4211..6928- (Laminarionema elsbetiae ELsaHSoW15)back to top |