mRNA_L-elsbetiae_contig9446.18433.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9446.18433.1
Unique NamemRNA_L-elsbetiae_contig9446.18433.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: D7FHB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHB5_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 1.540e-84
Identity = 168/276 (60.87%), Postives = 193/276 (69.93%), Query Frame = 3 
Query:   36 RSPSVPLRSQPEQVSAEGTAVSEEPAEPEQLPGFISNDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAERICLLPPGEAMETRSGLWWWNPEKQQE---DAEEEAXXXXXXXXXXXXXXXXXXAQDTN-EITIAVREAGACGARVLLGDKDYETTARNLEKAKRLDMAGAKERQSFNEMTASFDSEESTREITRKECEQMKATAPKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHGWERQGA 851
            RS S+PLRS+  Q SAE T +S +P + E LP  ISNDAVSYWVHPAKES+IWLVG +H   S  +LVEE IGG++PEVVMVELDA+RIC+LPPGEAMETR+GLWWW PE++ E   D +E+ XXXX      XXXX    +     EI  AVREAGACGARVLLGD+DYETT R LEKAKR DMA AKER+ FN++T SFD            CE                   VMAKNLMKLR +QTTVAV GMAHLDGVEKVLKGHGW+R+ A
Sbjct:   84 RSRSLPLRSKQVQASAEETNLSADPTQ-ETLPECISNDAVSYWVHPAKESHIWLVGVVHGAKSGVQLVEEAIGGIRPEVVMVELDADRICVLPPGEAMETRNGLWWWAPEEEPEGSADVDEDGXXXXEYAEDDXXXXDEEESVSPMIEIQTAVREAGACGARVLLGDRDYETTGRLLEKAKRADMASAKERKEFNDLTTSFD------------CE-------------------VMAKNLMKLRGEQTTVAVIGMAHLDGVEKVLKGHGWQRRRA 327
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: D7FHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB7_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 3.790e-32
Identity = 95/283 (33.57%), Postives = 137/283 (48.41%), Query Frame = 3 
Query:  111 AEPEQLPGFISNDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAERICLLPPGEAMETRSGLWWWNPEKQQEDAEEE---------------------------AXXXXXXXXXXXXXXXXXXAQDTNEITIAVREAGACGARVLLGDKDYETTARNLEKAKRLDMAGAKERQ------------SFNEMTASFDSEE-STREITRKECEQMKATA-PKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHGW 836
            A  E +P F SND VSY  +P   S IWLVG +H   +S +L + V+   +P+VVM+ELD++R+  LPPGEA +   GL W+ PEKQ +DA  +                           +                   ++ +E+ +AV EA ACGARVLLGD+D+E T R L  A   D  G +               S  +  A  D  +  TRE   +    MK  +  +    M  +R+ VMA NLM ++    TVA+ G+ H+DG+E++LK +GW
Sbjct:   20 ARSEAVPAFTSNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSKRLDDLPPGEAQKAEDGLTWFMPEKQPDDAVAQYVTLEGGGDDVELSRGDRWKGPFSFMSSSRAKSFVGAIKAMVDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETRETAGEHYAAMKRLSNQRALEAMVPERDEVMASNLMTIKGKPITVALVGLFHVDGIERILKRNGW 302
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: A0A6H5K4M4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.120e-30
Identity = 108/307 (35.18%), Postives = 152/307 (49.51%), Query Frame = 3 
Query:   54 LRSQPEQVSAEGTAVSEEPAEPEQLPGFISNDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAERIC--------------------LLPPGEAMETRSGLWW------WNPEKQQEDAEEE--AXXXXXXXXXXXXXXXXXXAQDTNEITIAVREAGACGARVLLGDKDYETTARNLEKAKR------LDMAGAKER---------QSFNEMTASFDSEESTREITRKECEQMKATAPKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHGWERQ 845
            L + P+Q +A GTAV   P   ++ P F+ +DAVSY  +P K+S +WLVGT H + SSA LVE VI  +KP+VVMVELDA+R+                     + PP E   TR+  +        +P+    D   +  A                       E TIA+ EA ACGA++LLGD+D   T R L +A R      +  +G  E           S   + +S D  ++ RE  RK     K  AP+++  M  +R++VMA NLM L   Q TVAV G+AH+DG+E +L  +GW+ Q
Sbjct:   93 LTASPQQAAAAGTAVGRRPGA-KRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMKPSKQGEKTLADGTGKEIAPPAER--TRNPFFGAFFKQLLDPKVPVNDRITDFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRKIDLQKISQSGQMETGLGLEALDGSSVESINSSLDILKN-RETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGWKCQ 395
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: A0A6H5KLL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL9_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.250e-30
Identity = 93/280 (33.21%), Postives = 136/280 (48.57%), Query Frame = 3 
Query:  120 EQLPGFISNDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAERICLLPPGEAMETRSGLWWWNPEKQQEDAEEE---------------------------AXXXXXXXXXXXXXXXXXXAQDTNEITIAVREAGACGARVLLGDKDYETTARNLEKAKRLDMAGAKERQ------------SFNEMTASFDSEE-STREITRKECEQMKATA-PKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHGW 836
            E +P F SND VSY  +P   S IWLVG +H   +S +L + V+   +P+VVM+ELD+ R+  LPPGEA +   GL W+ P+KQ ++A  +                           +                   ++ +E+ +AV EA ACGARVLLGD+D+E T R L  A   D  G +               S  +  A  D  +  TRE   +    MK  +  +    M  +R+ VMA+NLM L+    TVA+ G+ H+DG+E++LK +GW
Sbjct:  119 EAIPAFASNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGEAQKAEDGLTWFMPQKQPDNAVAQGVTSRGGGDDVDLPRGEKWKGPFAFMSSSRVKSFVGAMKAIIDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKTFAGLDLRKPDTREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKPITVALVGLFHVDGIERILKRNGW 398
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: A0A6H5LN04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN04_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.900e-21
Identity = 64/156 (41.03%), Postives = 83/156 (53.21%), Query Frame = 3 
Query:  120 EQLPGFISNDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAERICLLPPGEAMETRSGLWWWNPEKQQEDAEEEAXXXXXXXXXXXXXXXXXXAQD----TNEITIAVREAGACGARVLLGDKDYETTARNLEKAKRLD 575
            +QLP  + +DAVS+  +P+  S IWL+G IHQ     +LV+ VI  +KP+VVM+ELDAER  LLPPG   +    LWWW P K +                          QD     +EI  A REA AC ARVLLGD+  E + R   +A+R D
Sbjct:   86 DQLPECLQSDAVSHIRNPSTGSEIWLLGIIHQAEPYVQLVQSVIREIKPQVVMLELDAERTFLLPPGTPYQGEDKLWWWKPAKAKGRRPGAVSNRKKAKPRKTTRNQRNFYQDEHVGVSEIWTAGREAQACRARVLLGDRSNEVSKRREREAERAD 241
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: A0A6H5KTH2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH2_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.220e-19
Identity = 72/224 (32.14%), Postives = 100/224 (44.64%), Query Frame = 3 
Query:  276 MVELDAERICLLPPGEAMETRSGLWWW-------------------------NPEKQQEDAEEEAXXXXXXXXXXXXXXXXXXAQDTNEITIAVREAGACGARVLLGDKDYETTARNLEKAKRLDMAGAKERQSFNEMTASFDS-----------EESTREITRKECEQMKATAPKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHGWE 839
            MVE+D  RI +LPPGEA +   GLWWW                         N  +   D  E A                    + +E   A R+A ACGARVLLGD+D++ T R +  A R D   A    S  + +A   +           E ++  + RK  +  K   P+ FAV+ T+R+ VMA NL+K+   Q TVAV G  H  G+  +LK +GW+
Sbjct:    1 MVEIDPCRIKMLPPGEATKDGDGLWWWDAVQEAGPATAVSSGDRDKDEVQAANTSRTPGDGLETATNAVARTRRRAKNDMNTDGMEMSEFYAAARQAVACGARVLLGDRDFQETTRRVSDADRADQEEAMS--SLGDSSAGKKNTVEPRIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKVEEGQGTVAVVGAHHTIGIGGILKANGWK 222
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: L1K338_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K338_GUITC)

HSP 1 Score: 84.0 bits (206), Expect = 6.500e-14
Identity = 73/244 (29.92%), Postives = 117/244 (47.95%), Query Frame = 3 
Query:  144 NDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAER---ICLLPPGEAMETRSG-LWWWNPEKQQEDAEEEAXXXXXXXXXXXXXXXXXXAQDTNEITIAVREAGACGARVLLGDKDYETTARNLEKAKRLD-----MAGAKERQSFNEMTASFDSEESTREITRKECEQM-----KATAPKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHG 833
            N  V+Y  HP  +  ++LVG++H +  SA++V EVI  V+P+ VMVEL   R   I  +  G+   T    L      +QQ  A                          NE+ +A+R A   GA+V+LGD+D +TT R L++   L      ++      S +  +  F  ++S +EITR +  +M      + +  + + +  +R+ +MA+ L +    Q  VAV GMAH+DG+EK  K  G
Sbjct:   87 NGHVAYLRHPRLQQEVYLVGSVHISKKSAEIVNEVILAVRPQAVMVELCEARKRAIVSIDQGQQTSTLDTILRMAGISRQQASA----------MVGDKILEFIDAYTRGNEMLVAMRAAEQVGAKVILGDRDQQTTLRRLKEEFNLSDVLKLLSTPMSPSSQSIFSTPFAKQKSEKEITRDDARRMLQRLRDSCSSGMISALVDERDEIMAQTLARCNF-QRVVAVVGMAHMDGIEKRYKDEG 319
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: D7G9B8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B8_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.890e-11
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 3 
Query:  120 EQLPGFISNDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAERICLLPPG 320
            E+LP  + +DAVS+  +P   S IWL+G IHQ     +LV+ VI  +KP+VVM+ELDAER  LLPPG
Sbjct:   32 ERLPECLQSDAVSHIRNPTTGSEIWLLGIIHQAEPYVQLVQSVIREIKPQVVMLELDAERAFLLPPG 98
[Close]
BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: UPI000D1C4448 (traB domain-containing protein isoform X1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C4448)

HSP 1 Score: 68.6 bits (166), Expect = 6.620e-9
Identity = 76/249 (30.52%), Postives = 110/249 (44.18%), Query Frame = 3 
Query:  135 FISNDAVSYWVHPAKESNIWLVGTIHQTASSAKLVEEVIGGVKPEVVMVELDAERICLLPPG-----------EAMETRSGLWWWNPEKQQEDAEEEAXXXXXXXXXXXXXXXXXXAQDTNEITIAVREAGACGARVLLGDKDYETTARNLEKAKR-------LDMAGAKERQSFNEMTAS--FDSEEST--REITRKECEQMKATAPKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEK 815
            FI+   +++  + +  + I+LVGT H +A SA+ VEEVIG VKP++V VEL  ER   L  G           E M+   GL      KQ+                          +   E  +A+ EA A  A +LL D+ Y+ T   L KA R       L +AGA   Q    +++    +S E    R+  RK    M  T P    VM  +R+  M + L+    +   V V GMAH+DG+E+
Sbjct:   62 FIAMGRIAHLKNSSNGAEIFLVGTAHVSAKSAEEVEEVIGIVKPDIVAVELCEERAKKLLAGYHDTSLFQKVQEFMKFPGGL------KQK--------VVHLALSASYQAMREAGLEPGKEFKVAMEEAKARRAGILLIDQRYDVTISKLTKAIRIRDVINLLGIAGADMEQIVEGLSSGNLIESIEKLKRRDAVRKLTSFMDRTFPSAVRVMLHERDEYMTRQLLTC--EGKVVGVVGMAHMDGIER 294
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BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Match: A0A6V2GKS8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GKS8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.270e-8
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 3 
Query:  465 EITIAVREAGACGARVLLGDKDYETTARNLEKA------KRLDMAGAKERQSFNEMTASFDSEEST----------REITRKECEQMKA-------------TAPKVFAVMCTQRNRVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHGW 836
            E  +AV+E  A G++++LGD+D + T R L +A      K+L  + +   +S  E+  S  S  ST          +E   +  E +KA              AP+++  M  +R+  MAK L K+    +TVAV G+AH+DGVE+ L G+GW
Sbjct:  294 EFVVAVKEGLAVGSQIVLGDRDVDVTLRRLTEALSKTDLKKLTSSDSDLEKSMQELLPSSSSGSSTGKPVDPTAVDKESLARYVEVVKAKDNVRLIMKTLQDAAPELYQAMVAERDEYMAKGLNKIDMFPSTVAVMGIAHVDGVERYLGGNGW 446
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9446.18433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FHB5_ECTSI1.540e-8460.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHB7_ECTSI3.790e-3233.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4M4_9PHAE1.120e-3035.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KLL9_9PHAE1.250e-3033.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LN04_9PHAE1.900e-2141.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTH2_9PHAE2.220e-1932.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
L1K338_GUITC6.500e-1429.92Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
D7G9B8_ECTSI2.890e-1153.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000D1C44486.620e-930.52traB domain-containing protein isoform X1 n=1 Tax=... [more]
A0A6V2GKS8_9STRA2.270e-832.68Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9446contigL-elsbetiae_contig9446:436..6611 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score88.6
Seed ortholog evalue3.5e-15
Seed eggNOG ortholog2880.D7FHB1
KEGG rclassRC00034,RC00767,RC02141,RC02755
KEGG koko:K03781
KEGG ReactionR00009,R00602,R02670
KEGG Pathwayko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
EggNOG free text desc.TraB family
EggNOG OGsCOG1916@1,KOG2860@2759
EC1.11.1.6
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-03_004070.1
Exons8
Model size1936
Cds size579
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9446.18433.1prot_L-elsbetiae_contig9446.18433.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9446 1306..5529 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817012.1788568-UTR-L-elsbetiae_contig9446:435..6681622817012.1788568-UTR-L-elsbetiae_contig9446:435..668Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9446 436..668 +
1691683981.9053402-UTR-L-elsbetiae_contig9446:435..6681691683981.9053402-UTR-L-elsbetiae_contig9446:435..668Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9446 436..668 +
1622817012.1906774-UTR-L-elsbetiae_contig9446:1263..13051622817012.1906774-UTR-L-elsbetiae_contig9446:1263..1305Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9446 1264..1305 +
1691683981.925116-UTR-L-elsbetiae_contig9446:1263..13051691683981.925116-UTR-L-elsbetiae_contig9446:1263..1305Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9446 1264..1305 +
1622817012.2875488-UTR-L-elsbetiae_contig9446:5529..66111622817012.2875488-UTR-L-elsbetiae_contig9446:5529..6611Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9446 5530..6611 +
1691683982.0270493-UTR-L-elsbetiae_contig9446:5529..66111691683982.0270493-UTR-L-elsbetiae_contig9446:5529..6611Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9446 5530..6611 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817012.2018023-CDS-L-elsbetiae_contig9446:1305..13621622817012.2018023-CDS-L-elsbetiae_contig9446:1305..1362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 1306..1362 +
1691683981.9385362-CDS-L-elsbetiae_contig9446:1305..13621691683981.9385362-CDS-L-elsbetiae_contig9446:1305..1362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 1306..1362 +
1622817012.2125509-CDS-L-elsbetiae_contig9446:1993..20351622817012.2125509-CDS-L-elsbetiae_contig9446:1993..2035Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 1994..2035 +
1691683981.9552338-CDS-L-elsbetiae_contig9446:1993..20351691683981.9552338-CDS-L-elsbetiae_contig9446:1993..2035Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 1994..2035 +
1622817012.2263877-CDS-L-elsbetiae_contig9446:2432..25051622817012.2263877-CDS-L-elsbetiae_contig9446:2432..2505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 2433..2505 +
1691683981.9689333-CDS-L-elsbetiae_contig9446:2432..25051691683981.9689333-CDS-L-elsbetiae_contig9446:2432..2505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 2433..2505 +
1622817012.2365332-CDS-L-elsbetiae_contig9446:3149..32381622817012.2365332-CDS-L-elsbetiae_contig9446:3149..3238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 3150..3238 +
1691683981.9800723-CDS-L-elsbetiae_contig9446:3149..32381691683981.9800723-CDS-L-elsbetiae_contig9446:3149..3238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 3150..3238 +
1622817012.2484443-CDS-L-elsbetiae_contig9446:3986..40851622817012.2484443-CDS-L-elsbetiae_contig9446:3986..4085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 3987..4085 +
1691683981.991263-CDS-L-elsbetiae_contig9446:3986..40851691683981.991263-CDS-L-elsbetiae_contig9446:3986..4085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 3987..4085 +
1622817012.261386-CDS-L-elsbetiae_contig9446:4595..46881622817012.261386-CDS-L-elsbetiae_contig9446:4595..4688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 4596..4688 +
1691683982.006651-CDS-L-elsbetiae_contig9446:4595..46881691683982.006651-CDS-L-elsbetiae_contig9446:4595..4688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 4596..4688 +
1622817012.2748337-CDS-L-elsbetiae_contig9446:5403..55291622817012.2748337-CDS-L-elsbetiae_contig9446:5403..5529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 5404..5529 +
1691683982.0174866-CDS-L-elsbetiae_contig9446:5403..55291691683982.0174866-CDS-L-elsbetiae_contig9446:5403..5529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9446 5404..5529 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9446.18433.1

>prot_L-elsbetiae_contig9446.18433.1 ID=prot_L-elsbetiae_contig9446.18433.1|Name=mRNA_L-elsbetiae_contig9446.18433.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp
MVELDAERICLLPPGEAMETRSGLWWWNPEKQQEDAEEEAEEDAEEGAED
DGDEEEEDAQDTNEITIAVREAGACGARVLLGDKDYETTARNLEKAKRLD
MAGAKERQSFNEMTASFDSEESTREITRKECEQMKATAPKVFAVMCTQRN
RVMAKNLMKLRRDQTTVAVFGMAHLDGVEKVLKGHGWERQGA*
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mRNA from alignment at L-elsbetiae_contig9446:436..6611+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9446.18433.1 ID=mRNA_L-elsbetiae_contig9446.18433.1|Name=mRNA_L-elsbetiae_contig9446.18433.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6176bp|location=Sequence derived from alignment at L-elsbetiae_contig9446:436..6611+ (Laminarionema elsbetiae ELsaHSoW15)
GGAGCCTCGCTGGGGCGGTGGAGGCTAGAGGTGCCCGCTCTCCGTCGGTG
CCGCTCAGAAGTCAACCGGAGCAGGTGTCAGCGGAGGGAACAGCCGTCTC
TGAAGAGCCGGCCGAGCCTGAGCAGTTGCCCGGGTTCATTTCGAACGACG
CCGTGTCCTATTGGGTGCACCCCGCGAAGGAATCCAACATCTGGCTGGTG
GGCACCATTCACCAAACGGCATCGTCGGCGAAGGTGAACCATTGCCGTTT
TCGTTTTTTTTTTATCGGCTATCCGTACGCATTCCTTCGCTGCTGACTCC
CCCCGATCGTTGGTTGTACCACCCTCGACGGTTGGCGCAGCATGCCTTCT
CTTTGTGGTGCATCTGGGACGTGAGTTTTGGGGGTGACAGACGAGGCGAA
GCTGCGGTCTCGACGCAACTGCTGCTGTGCTGCTTACCGATGCAGCTGTA
GACTATGGTATTGTTTTCGATTTTATCTCCAGAGAGCTAGCTAGCTGGCT
GGGTTATGCCGCGATTGGATGGCTGCTTACCGATGCAGCTGTAGACCATC
GTTTTGGTTTTATCTCCAGGGCTGGCTTGGTCATGCCGTGTTGTATGGCT
GCTTACCGATGCAGCTGTAGACTACCGTTTTCGTTTTATCTCCAGGGAGC
TAGCTGGCTGGCTGGGTTATGCCGCGATTGGATGGCGCCGTCCTGGGGGA
CGGGTAGGCCCGGGTCGTACGGCAAGCAATTTCGATGTCGATGGCGCGAT
TTTCCATGCCACGCGCGTCCTCACCGAGCGCTCGTTTGCTCTTCAAACAC
GCGGCTTTGTTCCTCTCGATTTGGGCAGTTGGTGGAGGAAGTCATCGGGG
GCGTCAAGCCTGAGGTCGTGATGGTGGAGCTGGATGCGGAGCGGATATGC
TTGCTTCCTCCCGGGGAGGCGATGGAGGTGTGTATGTGTGTGTGTGCATG
GCAGTTTTGTCGTGTTTTGTGTCCATCATTTCTCGTCCCGTTCGCAACAC
CCCCCAAGAGCTATTGTTGAGATATTTAGATGGTATGTATCTGGTGTGGT
GCTGACCTGCCAACGGGTTCCCGGCAACTGCAGAGGCTTTGACGAAGCCG
ACCACGCTCACGCATTACTTCATACATAGCTTCATTCACGCCTTCGTATG
GTTTGGAGGTGTCGGTGGCAGGTCAGCGCCCCACTTCTCTCGCGGCGAGG
CATTGGAGCGAGGGCAATACCCGCGGGTGGGGGACATGTGCTCGGGCTCA
TTGATAAACCGACGCTTGATAGACCGACGCTTGCTGCTCCGATGTTTGTG
TTTGTGTTTCGTTTCGCTCCACCACCAAGCGGTCCTGTTTCCATATCCTG
TCAAAAACAAAAACGCGCGGCGTCCCCATCGGCCCCCATCTTTTCTGATG
CTGTTTGTATACTTGGAGTATATCGTATTGCTGATGTCGTATTGCTGATA
CTTACGTGGATGATAATTAATTGTATTGCTGACATTGTATTGCCGATATT
GTATTGCTGTTAATTGTATTGCTGATAACGAATAGTATTGCTGATGCTGT
TGCCGCAGACGAGGAGTGGGCTCTGGTGGTGGAACCCGGAAAAACAACAG
GTGAGCGGAGAGAAAACACACACGCACACACACACACACATGCGTTTTAA
GGCCGACGCGGCGGCGCATGCAACTGATTGATGTCACTGATGCCCGGTGT
GTGGGTGGCGGCGCTACATAACACATACATACATACATACATATATAGCT
GTGTTGCGATATTGTTAGGAGTCTTGGCGGGACGGTTTACGAAAACACGC
TTCCCGAAGCGTATGGGGGTGGTGACGGTGCCGTGTTGTGTATTTCACTG
TTGCTCGGCCGAAAGGGGGGCGCGAGGTCAATGCTGTCGGTGAAGAAAGA
GGCGCTGCCGTCTGAGCTGAGCTGTGCGTGCTCCCCACCCACCCTCACGA
GAGCACCTTTGCATCCCTCGGCGCTACATCTGCTGCCCAATGCCCAGGAG
GATGCGGAGGAAGAAGCGGAGGAAGACGCGGAGGAAGGAGCGGAGGACGA
CGGAGACGAAGAGGAGGAAGGCGAGTAAGAGGCGGATAGGACGGGCAGTT
TTACAAGACATGAGACGACAAGGCAAAACCTCACTGCTGACATTTGTTGC
TTCGGGCCATTGATTAAAAATATCGCTCGTGCTTATGTATACATGTAGGC
TCCATGTAGTCCACCTGCTTTTGAGAAATCGACAATTTTGTTACCGTCAC
GTGTGTTTGCCACAAGAAAAGAACCTTCCTCCGATATACCAGGGAGCCCT
GGCGAGCAGCGTATAGGATTTCAAGAGGCGTCACGGACATCGTTGAAACT
GTTTGGGTGTAAAACATAAACATGACAGTCTCGGGGTTGTGCGGCAGGGG
TTGAACCCGAGGGTTGGCGCCGTCACTTCTTCGTCCGCCCAAGCAACAGT
CGCTCTGCACACGTACCTCTGACCGGTTTTGTTGGTGCTCGGTAGGTTCG
CTTGTTGTCGTCGCGACAGCTATCCTCGGCACGTCTCGTTTCTCCCATCA
CAGGGGTACATTATCAGCTCGGCTCGAGAAAAGCAGTTACAACAAACAGG
CATTCGGCTGATACCCCTCCAACAGCAACGTGGTTGACGGCAAAAAAACA
CCGGACGCGTTAACACTTACATAGCACGATTCACAGATGCGTTCGTCGTT
TTTGTCTTGTGCAGATGCCCAGGACACGAACGAGATCACCATTGCGGTCC
GGGAAGCCGGCGCGTGCGGCGCAAGAGTGCTTTTAGGGGACAAGGACTAC
GAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGTCT
TTATCGATGCCAGACCACTGGACACGCTCGCGTTCACGTTTTTGGCCATG
GCCCGTCAGTTTTTTTTTGTTGCGATATTTAGAAGAAGAATTGACAGAGC
AGACGGAGCAGCAGCTGCTATCGTGGATTCAATGTGGCTTGCGTAGTTCG
GTTTGAATAAATGCTCGAAGTCGGCAGCAGGTTCGGTATTTTGGTACATT
GTTGTGTGTTGTTTGGATCTTCGTAGGATCTAGCACTCTGCTGATCACGC
ACGGGATCGTTTTAATCGATGGGTTATAATGTGAGAAGCAACAACACCTA
TGTATACATAAACGAACGAATCGCTCTTTGGCTTGGTTATGGGTGCTCAT
ACGATCGCATCACTTTTACGGAGAGCGGGATGCGTCCTTTGCTGGTTTCC
TCGAATCTCCGCGGTTGCTGGAGCGTGTTTCGATAGGTCGAAGGTTTGTC
TGTGTTTATTTCGTCAAAGCGGTCAAATAGCAACACCCCCCGACGACGTT
AGGACCAAGAAAAACATGGTAAAAGCCGGAAATACCTTTGTCTTTTTCAT
GAACCCGAACTCCCCAACATCGAGACACGTGAGTATGTTTCATTAATTCT
CAAGACGAAGCAAATACTGGGCCATGTTTTGGTTTCGTTTGACTCGTTTT
TATTTTTTGTCGCTCGCTCGCGCACGCTCCCTACCTACCTCCGGATTGCA
GACAACCGCCCGCAACCTGGAGAAGGCGAAGCGGCTGGACATGGCGGGCG
CGAAGGAAAGGCAGTCGTTCAACGAGATGACGGCTAGTTTCGATTCCGAG
GTGATAAAAGGGGGGCCCGGTTGTCAGCGAGCGGTGTACTTCTCTATTGT
AGCCGATACCTAACACAACCATGTGTGTATTACACTTTCCCTTTTTTATG
CTCGTTTCTTTTAATGTGAACAGCAACAACCAATGTAGGTATATACTCAG
TTTTCGTGTAGGGTCGTGTCAACAGAGCACAGCCTGTGGCAACTCAAGGG
CTCGTCGTTGTTTGGAGTGGTCCAATACCTGAAGGGCCCTGCCAAGCCTG
CATCTGCGTCGCTTCGCGTTCTGTATCGGTACTCGTTCTCTCTTGAGGAA
ACACCGACGAGCTTTAGCGAACGGCCGCGCCTGTCACCTACTCCGTGTGT
TCACACACACATACATACGTCCATGGACAGCCCCGAGCTCGATCCATATT
TTGCGTGTCCGTACATATGTTGTGTGCTGTGCATGTATGTGTCCCGGCCT
GTCCCGTATTATTTTTAACACCTGCGATTGCGCCGCCTGTCGTTCCTTCA
CGCGCGGCAGGAGTCGACCCGTGAGATCACGCGCAAGGAGTGCGAGCAGA
TGAAGGCGACAGCGCCCAAGGTTTTCGCGGTCATGTGCACTCAGCGGAAT
CGGGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCA
GTCCCGAACGCAGAATCGCATTTGTGTTTGCTTGTTTAGGCGATATCGTC
CAACCTAACCCCAATCCCTCCGTTCCTCTTGGTATGAATATGTTTATGCT
GTTCTTGCAACAACGCCCACCGATTTCCGATGCCGAGCAGAACTGATTGT
TGTGTCCGTGGTGCGTTTTTTGCCCCGACCGGGTTGCTCGCTTGTCTGGC
CTGCTTGACTGACATCTGCAGAGAGGCGAGTCTCAGCGCGCGCTAAGCGA
GAATCGCTTTGTATTCACAGGGATGAACAGGGATGGGCGGAATGGTCTGT
CCAGACCCCGTTGTTTTGAGAATCTCGCGCAAAAGACCACCAATTTCTCA
TTCTCGACCCCCATAGAAGCGGAAATTAAACCATTAGACCAGTCTCAGTA
CTGACTGGTCTAATGGTTTAATTTCCGCTTCTATACCCCCCTCCCGAGTG
CATCATTTCCTTGCAGTGTACCTTCGAGGGCACAGCCTCTCACCACCGTG
CCTGGGGTATTCACCAGAATATCCATAACATGGCGTTTTGGTAGAGGTGT
GTTTTTAGGCCTACCTGCTTTTTTTCTCAATGGTCGGTTTCGAGCATCCT
TCAACTTGAGCTTGCCCCCGCGAATCGCCTCGTCTCGCATGTGATATTTA
CACACTTATCAACGCCAGGTTATGGCGAAGAACCTGATGAAGCTCCGACG
CGACCAGACAACGGTGGCCGTGTTCGGAATGGCACACCTGGACGGAGTCG
AGAAGGTGTTGAAGGGACACGGCTGGGAGCGTCAGGGGGCTTAGTTTATC
TAGACCTCCAGCGTGGTTCTCACGCGAGCGGCAGAGGCCGTTTTTTTTTT
AAATACTAAGAGTCCGTGAGTTGGCGAATTCGGGACTTTTAGCTGGTTCG
CGTGGGTTGTTCGCGGCTGTGGCGGACCTACCCGCGCGCAGAAGAAAGCT
TGGAGAATTTGGGTGTGTCGAACGCTGCCGTTGATGGTACCGCCGAATCA
CGAAGAACCCGGTGCTACATAACGTATGTTGCGACTGGAAGGGGCAGGTG
GACGGGTGTGACGGTACGAGTTGTCCTTGCGTACGGACGCTAACTACTGT
ACGCTTCATGCGCGCGACCTCGTCGAGGCTTCAAGACACACGTTTTGTGT
GTGCATGTGTGCCTTCACACTCGTGTATTCTCGTGCGTACCTATTTGCGG
GCAGCTGACGCACCAGGGGAAGTCCCACGAGGAGAAATAGTTACACGGGC
GTGTCTTCGGTGTCTGTTTTCGCACCCCCCCCTCCAGTGGTGTTTGCGTT
TGCCTTGGATTATGAGACGCAATAAGGGTCCGCCGTAGCATAGGAGTATA
TCCCTTAGCTCAATGATATTCTCTCGGAGCACTTTTCCACGCCTAGCTGG
GGATGGTTCTTTCTCCCAGGGGAGATTTCAACCGTGCTGGGAGGTTTAGG
AGGCCAAGGGCGATGAGCAAGCTCGGGGTTGACCTTTTGTACGGAGTAAG
CGGCAGTGCCCTCTGGTAAATTGCCGCCCACTCCACACGAGGAATCAAGA
TCGAGCTTTTGCCCACCCCCTTTGTGTCGTGTGGCAAGCTCGCATTGAGA
GCGCAGGGTGTGTACGGCTGCCATGTGTTTGTTCGGCGTCCCTCACGTTT
ACAAGAGCCGCGTCCGCGTTTTTTGCTTGAGTTGCGTGCGCAACTCGCAA
CGTGTTTTCGGAAAGGATATCGAGTTGTCTTTTTTGGGTGCATTGCTGAC
TGGGCATGTTCCAGACGTGCGCGGCTCTAAGAAGGCAGAACGCCTCTGTC
TCATCCTCATCCATTTCGAGATGTGTATGATGCGCAAACTCAGTTGGGCA
CCGAGCCTTTCGCGAAGGCTCTGCAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9446:436..6611+

>mRNA_L-elsbetiae_contig9446.18433.1 ID=mRNA_L-elsbetiae_contig9446.18433.1|Name=mRNA_L-elsbetiae_contig9446.18433.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig9446:436..6611+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGAGCTGGATGCGGAGCGGATATGCTTGCTTCCTCCCGGGGAGGC
GATGGAGATGGTGGAGCTGGATGCGGAGCGGATATGCTTGCTTCCTCCCG
GGGAGGCGATGGAGACGAGGAGTGGGCTCTGGTGGTGGAACCCGGAAAAA
CAACAGACGAGGAGTGGGCTCTGGTGGTGGAACCCGGAAAAACAACAGGA
GGATGCGGAGGAAGAAGCGGAGGAAGACGCGGAGGAAGGAGCGGAGGACG
ACGGAGACGAAGAGGAGGAAGGAGGATGCGGAGGAAGAAGCGGAGGAAGA
CGCGGAGGAAGGAGCGGAGGACGACGGAGACGAAGAGGAGGAAGATGCCC
AGGACACGAACGAGATCACCATTGCGGTCCGGGAAGCCGGCGCGTGCGGC
GCAAGAGTGCTTTTAGGGGACAAGGACTACGAGATGCCCAGGACACGAAC
GAGATCACCATTGCGGTCCGGGAAGCCGGCGCGTGCGGCGCAAGAGTGCT
TTTAGGGGACAAGGACTACGAGACAACCGCCCGCAACCTGGAGAAGGCGA
AGCGGCTGGACATGGCGGGCGCGAAGGAAAGGCAGTCGTTCAACGAGATG
ACGGCTAGTTTCGATTCCGAGACAACCGCCCGCAACCTGGAGAAGGCGAA
GCGGCTGGACATGGCGGGCGCGAAGGAAAGGCAGTCGTTCAACGAGATGA
CGGCTAGTTTCGATTCCGAGGAGTCGACCCGTGAGATCACGCGCAAGGAG
TGCGAGCAGATGAAGGCGACAGCGCCCAAGGTTTTCGCGGTCATGTGCAC
TCAGCGGAATCGGGAGTCGACCCGTGAGATCACGCGCAAGGAGTGCGAGC
AGATGAAGGCGACAGCGCCCAAGGTTTTCGCGGTCATGTGCACTCAGCGG
AATCGGGTTATGGCGAAGAACCTGATGAAGCTCCGACGCGACCAGACAAC
GGTGGCCGTGTTCGGAATGGCACACCTGGACGGAGTCGAGAAGGTGTTGA
AGGGACACGGCTGGGAGCGTCAGGGGGCTTAGGTTATGGCGAAGAACCTG
ATGAAGCTCCGACGCGACCAGACAACGGTGGCCGTGTTCGGAATGGCACA
CCTGGACGGAGTCGAGAAGGTGTTGAAGGGACACGGCTGGGAGCGTCAGG
GGGCTTAG
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