prot_L-elsbetiae_contig9380.18378.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9380.18378.1
Unique Nameprot_L-elsbetiae_contig9380.18378.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length595
Homology
BLAST of mRNA_L-elsbetiae_contig9380.18378.1 vs. uniprot
Match: D7G4R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R8_ECTSI)

HSP 1 Score: 620 bits (1599), Expect = 5.530e-213
Identity = 386/598 (64.55%), Postives = 450/598 (75.25%), Query Frame = 0
Query:    1 RYNSLKATFEARLASLADTVRCAVENIHQDQVLKQLSASKNTREFAPAHAHVLIKRHLASERDVFFHGLAVQLADAEAEVARRTRRNEELESSLSVLRGEAAREAQSRVEVTSVNADIQELRREYQIALEDASAECQQLKVEFSHAKRRSSVLKGERDQHVVQSRSLEQALTDAGEKKLEALRLERELGQEKSANAKLSSELTRAQQSLDGLTSSHQTLKAQASMGDNDLSQRDRRLQLAEVNRKKNEEQFREAVTRMESLMEEEAKDSVSAIKNLRDKAMLAKDRLSTEVERLRSANGQLTTNLAEAKAKCVELDLRLQAALKSKETDASAAAAREDVLRAEAEQARTRADTMSQSLAEAIREQSGMLTETANAKVAAEVLEAKSRTAEVEMARAAGRETERAQALVNERPPPPVPSPEWEVDDLLAEKLQEASKHITELRTVLRREVRRREAAEAEVSEAQGYLNSSRQELGELRHLAWKLEQMGRNSIVHIDENNKVIKQLEDELHVRGVAAAAAGSEGANIRGGASQRQRGPAVPRVGIESRRA--GDKVEVAERQVRRRTFPNAFSS---GKQL-LAALSGLRSELQCVTTQV 592
            RY+SLK TFEARLASLA T+R AVE+  QDQVL QL+AS+NTREFAPAHA  LIK++LASERD F H LA++LA+ EAE+ R +R NEEL S ++VL+GEAAR  +SR E  +V+ADIQELRREYQIALED+S EC+QL+ E SH+KRRSSVLKGERD+   QSRSL+QAL DAG K+LE  RL  EL +EKS   KLSSEL +AQQ LD L SSHQ LK Q    + DL+QRDRRLQLA+ N++K+E +FREAVTRMESLME EAKD  +AIKNLRDKA+LAK+RLSTEVERLR  NG L   +A A+A+  EL+LRLQAALKSKETDA+AAAARE+ LRA AEQARTRADTMSQSLAEAIREQSG+LTETANAKVAAEVLEAKSR AEVE                                ++LAEKLQEAS HI+ELRTVLR+EVRRREAAEAEVSEAQGYL SSRQELGELRHLAWKLEQMGRNS  H+D N++ +  LE ELH RGVA    G E         +R+ G ++P  G    R+  G K E      RRR+ P A SS   G++L LAAL+GLR+EL+CV TQ+
Sbjct:    3 RYDSLKTTFEARLASLASTIRLAVESTQQDQVLVQLNASENTREFAPAHAQALIKQYLASERDTFSHDLAIRLAEVEAELLRCSRHNEELRSVVAVLKGEAARGERSRSEAIAVDADIQELRREYQIALEDSSVECRQLQAELSHSKRRSSVLKGERDEQAAQSRSLQQALADAGAKELEVTRLNEELREEKSRGVKLSSELAQAQQRLDALASSHQELKFQTQCLEKDLTQRDRRLQLADANKRKSEARFREAVTRMESLMEGEAKDCAAAIKNLRDKALLAKERLSTEVERLRGDNGHLRKGIAVAEARGSELELRLQAALKSKETDATAAAAREEALRATAEQARTRADTMSQSLAEAIREQSGLLTETANAKVAAEVLEAKSRAAEVE--------------------------------NMLAEKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAVSHLEGELHARGVAGTVGGEEARRGANREEERKHGRSLPSGGWARGRSEGGGKEEAGLLCARRRSVPQALSSWKGGQRLFLAALAGLRAELRCVNTQL 568          
BLAST of mRNA_L-elsbetiae_contig9380.18378.1 vs. uniprot
Match: A0A6H5KLZ7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ7_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 4.670e-37
Identity = 131/313 (41.85%), Postives = 159/313 (50.80%), Query Frame = 0
Query:  286 RLSTEVERLRSANGQLTTNLAEAKAKCVELDLRLQAALKSKETDASAAAAREDVLRAEAEQARTRADTMSQSLAEAIREQSGMLTETANAKVAAEVLEAKSRTAEVEMARAAGRETERAQALVNERPPPPVPSPEWEVDDLLAEKLQEASKHITELRTVLRREVRRREAAEAEVSEAQGYLNSSRQELGELRHLAWKLEQMGRNSIVHIDENNKVIKQLEDELHVRGVAAAAAGSEGANIRGGASQRQRGPAVPRVGIESRRA--GDKVEVAERQVRRRTFPNAFSS---GKQL-LAALSGLRSELQCVTTQV 592
            RLSTEVERLR  NG L   +A+A+A+  EL+LRLQAALKSKE DA+A AARE+ LRA AEQAR RADTMSQSLAE                                                                 +LA+KLQEAS HI+ELRTVLR+EVRRREAAEAEVSEAQG+                           H+D N++ ++ LE ELH RGVA    G E         +R+ G ++   G    R+  G K E      RRR  P   SS   G++L LAAL+GLR+EL+CV TQ+
Sbjct:  299 RLSTEVERLRGENGHLMRGIADAEARGSELELRLQAALKSKEIDAAAGAAREEALRATAEQARARADTMSQSLAE-----------------------------------------------------------------MLADKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGF--------------------------AHMDGNSQAVRHLEGELHARGVAGTVGGGEAGRGPLREEEREDGRSMLSGGRARGRSEGGGKEEAGLLCARRRRVPQGLSSWKGGQRLFLAALAGLRAELRCVNTQL 520          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9380.18378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4R8_ECTSI5.530e-21364.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLZ7_9PHAE4.670e-3741.85Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..325
NoneNo IPR availableCOILSCoilCoilcoord: 344..364
NoneNo IPR availableCOILSCoilCoilcoord: 73..93
NoneNo IPR availableCOILSCoilCoilcoord: 438..472
NoneNo IPR availableCOILSCoilCoilcoord: 111..149
NoneNo IPR availableCOILSCoilCoilcoord: 244..264
NoneNo IPR availableCOILSCoilCoilcoord: 167..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9380contigL-elsbetiae_contig9380:543..6026 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9380.18378.1mRNA_L-elsbetiae_contig9380.18378.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9380 543..6026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9380.18378.1 ID=prot_L-elsbetiae_contig9380.18378.1|Name=mRNA_L-elsbetiae_contig9380.18378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=595bp
RYNSLKATFEARLASLADTVRCAVENIHQDQVLKQLSASKNTREFAPAHA
HVLIKRHLASERDVFFHGLAVQLADAEAEVARRTRRNEELESSLSVLRGE
AAREAQSRVEVTSVNADIQELRREYQIALEDASAECQQLKVEFSHAKRRS
SVLKGERDQHVVQSRSLEQALTDAGEKKLEALRLERELGQEKSANAKLSS
ELTRAQQSLDGLTSSHQTLKAQASMGDNDLSQRDRRLQLAEVNRKKNEEQ
FREAVTRMESLMEEEAKDSVSAIKNLRDKAMLAKDRLSTEVERLRSANGQ
LTTNLAEAKAKCVELDLRLQAALKSKETDASAAAAREDVLRAEAEQARTR
ADTMSQSLAEAIREQSGMLTETANAKVAAEVLEAKSRTAEVEMARAAGRE
TERAQALVNERPPPPVPSPEWEVDDLLAEKLQEASKHITELRTVLRREVR
RREAAEAEVSEAQGYLNSSRQELGELRHLAWKLEQMGRNSIVHIDENNKV
IKQLEDELHVRGVAAAAAGSEGANIRGGASQRQRGPAVPRVGIESRRAGD
KVEVAERQVRRRTFPNAFSSGKQLLAALSGLRSELQCVTTQVCW*
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