mRNA_L-elsbetiae_contig9365.18361.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9365.18361.1
Unique NamemRNA_L-elsbetiae_contig9365.18361.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 1.870e-106
Identity = 200/447 (44.74%), Postives = 253/447 (56.60%), Query Frame = 1
Query:   22 VCAFPGCQKRCWLEQSGKVHPFCGITHAGEAKKKGMS-GVGAGHQN-RTCQLAGCSEPALFDDRRNCWHDFCSRSHASAAIASGQQWVR----GGCGKGASTCRFPGCRAGVYRNQATGKVSTFAPALSLCVSVRGKCCQ-GHVASVELTNSLIKFFLHTICSMP---ASACLSSSCRLTTMTSLVGGKYPTPES-NFCSKRHR---DSSTGVPSRNPCILLVFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKH---GAPMVLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYS 1311
            +C  P C + C  +    VH FCG THA EA  +G+   +   H N   C+L GCS P  FD  +                A GQ W R    G    G STC+ PGC  GV+ + AT   S +        +   +C + G  ++  L N     +  + C++      A  S SC+L   + +    + T  + ++C + HR   +  T   + +  +  +F  GTT  + F L  L+ AH  Y S+ +QF  KW+K    G   V  IL +EVPA V R    Y +T  NV+RRFHGT CS +CNFF DL+G+PC    C+VCSICT GF + GNVG TARRT+  LRYGEGLYFSSVSGKANDYA FSEK     GRRLRCMFVANV AGK + T + SL +N CPPA YDSVVGE GQ LN+DELVVYK+EAALPTHLIVYS
Sbjct:   10 LCGIPECTRPCH-DGGTVVHDFCGRTHAEEAVSRGIRPSLRRPHGNCHECKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQ-WTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANTRECLRKGCTSTAWLANIEGPQYCSSRCAIDDGGQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDS-NGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVYS 453          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 1.580e-95
Identity = 186/467 (39.83%), Postives = 247/467 (52.89%), Query Frame = 1
Query:   22 VCAFPGCQKRCWLEQSGKVHPFCGITHAGEAK--------KKGMSGVGAGHQNRTCQLAGCSEPALFDDRRNCWHDFCSRSHASAAIASGQQWV--RG-GCGKGAST-------CRFPGCRAGVYRNQATGKVSTFAP--------ALSLCVSVRGKCCQGHVASVELTNSLIKFFLHTICSMPASACLSSSCRLTTMTSLVGGKYPTP----ESNFCSKRHRDSSTGV---PSRNPCILLVFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKH---GAPMVLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYSL 1314
            +CA P CQ  C+ +Q G VH +C  T + EA         +      G G     C+LAGCS     D+R    H+FC R HA+ A+A+G++    RG G GKGA         C   GC+  VYR+  T   S +          A+     +R  C     A V+     +  +  + C+            + ++   V   +  P    E+ +C + HR  +T     P+  P +   FR GTT A  F LS L   H +Y+S + QF  KW K        VL I K++VP  + R          NV+RRFHGT CS  C FF DL+G PC    C+VC+ICT GF++  NVG TARRT+  LRYG+GLYFSSVSGKANDYA  SEK     G+++RCMF+++V  G+ + T +G LP   CPP  +DSVVGE G ALN+ E+VVYKEEAALPTHLIVY+L
Sbjct:   11 LCALPDCQSPCFEDQDGFVHSYCSRTCSNEALARAKWASLRSSSRNRGGGSDGSRCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGC--SRAAWVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDR-SGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVYAL 474          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 3.110e-86
Identity = 133/223 (59.64%), Postives = 162/223 (72.65%), Query Frame = 1
Query:  649 FRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKHGAPMVLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYSLP 1317
            FR GTT A+ F LSAL+ AH  Y S+ +QF  KW+K G P VL IL+++VP  + +    Y +   NV+RRFHGT CSA+CNFF DLKG+PC    C VC+ICT GF +  NV  TARR +   RYGEGLYFSSVSGK+NDYA  SEKV    G+++RCMFVANV AG  Y T QGSL ++MCPPA YDSVVGE G  L HDELV Y++EAA+P++LIVY+LP
Sbjct:   12 FRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGS-DGKKVRCMFVANVTAGNAYLTQQGSLGQDMCPPAGYDSVVGEVGSGLIHDELVAYEDEAAIPSYLIVYALP 233          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 2.770e-79
Identity = 177/458 (38.65%), Postives = 230/458 (50.22%), Query Frame = 1
Query:    1 MAARTLP-VCAFPGCQKRCWLEQSGKVHPFCGITHAGEAKKKGMSGVGAGHQNR--TCQLAGCSEPALFDDRRNCWHDFCSRSHASAAIASGQQWVRGGCGKGASTCRFPGCRAGVYRNQATGKVSTFAPALSLCVSVRGKCCQGHVASVELTNSLIKFFLHTIC---------SMPASACLSSSCRLTTMTSLVGGKYPTPESNFCSKRHR-----DSSTGVPSRNPCILLVFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKHGAP---MVLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYSL 1314
            MAART P  C  P C  R   +++G VH FCG THA EA  +G++        R   CQL GCS+P  FD      +           +  G  W+                                  +  L    R    +G  ++  L N+  + +    C             S C    C + T+  L  G+    +  +CS+ HR      S   + S  P +  V+ VGT R   F L AL  AH +  S+R+QF  KW+K        V+ I ++EVPA V      Y++T  N++RRFHGT CS  CNF  D + SPC    C +C+I  RGFK++ NVG TA   + +LRYG+G+YFSSVSGKANDYA  + K     G +LRCMFVANV AGK YST + +L    CPP  Y+SVVGE GQ LN+DELVVYKEEAALPTHLIVY+L
Sbjct:    1 MAARTAPGSCDIPECT-RPRHQRAGIVHNFCGRTHAMEAVSRGLAAKLDRPHGRCHVCQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGD-WIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKERLVLNKHAGSVCKLRYCSVGTLHHLQTGE----DLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVGTPR---FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAK-DGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVYAL 448          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 2.170e-77
Identity = 131/252 (51.98%), Postives = 164/252 (65.08%), Query Frame = 1
Query:  490 MPASACLSSSCRLTTMTSLVGGKYPTPESNFCSKRHRDSST----GVPSRNPCILLVFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKHGAPMVLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEA 1233
            M AS C    C        V G     ES++CS+ H+  +     G+ +    +  VFR GTT A+ F LS L+ +H  Y S+ +QF  KW+K G P V  IL+++VPA +   + NY +   N++RRFHGT CSA CNFF DLKG+PC    C VC+ICT GF + GNVG TA+RTSI LRYGEGLYFSSVSGK+NDYA  SEKV    G+++RCMF+ANV AG  Y T Q SL +NMCPPA +DSVVGEA
Sbjct:   21 MGASECKLKGCSKNVYRDPVTGL----ESDYCSRGHQAHAIALGQGMRTVTSHVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGS-DGKKVRCMFIANVTAGNAYLTQQVSLGQNMCPPAGHDSVVGEA 267          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 4.810e-57
Identity = 104/228 (45.61%), Postives = 134/228 (58.77%), Query Frame = 1
Query:  646 VFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKHGAPM---VLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKG--SPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYSL 1314
            V  VG++ +    L  L    R+Y ++R  F+ +W+K        +  +  ++V   +      Y     N+ +RFHGT C+  CNF  D +G  +PC    C VC+IC  GFK+  NV  TAR T + LRYGEG+Y +SVSGKANDYA+ S K +      LRCMFVA+V  G+ + T    LP N CPP  Y SVVGE GQ LN DE VVY EEAALPTHLIVY+L
Sbjct:    7 VLPVGSSES---VLQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAK-KIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVYAL 230          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D8LS85_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS85_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 4.060e-55
Identity = 144/395 (36.46%), Postives = 187/395 (47.34%), Query Frame = 1
Query:  163 CQLAGCSEPALFDDRRNCWHDFCSRSHASAAIASGQQWVRGGCGKGASTCRFPGCRAGVYRNQATGKVSTFAPALSLCVSVRGKCCQGHVASVELTNSLIKFFLHTICSMPASACLSSSCRLTTMTSLVGGKYPTPESNFCSKRHR-------DSSTGVPSRNPCILLVFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKHGAPM----VLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSIS--LRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVY 1308
            CQL GC EPA F+       ++CS  H   A +  ++  R  C + A      G                    L  C         G   S  L  +L      T C +P        C+     +L GG + +    FCS+ HR           G PS  P    V  V     S   L  L   H ++ S+ +QF  KW+ H  P     VL+++K+EVP  V     +Y     NV+RRFHGT  S  C F+  + GS C   DC +C+IC RGFKI  NVG +  R      L YG+GLYFSSVSGKAND++A +EK+    G  +RCM VA+V AGK + T +   P+   PP  Y+SVVGE G  LN+DELVVY   AALPTH +VY
Sbjct:    2 CQLPGCKEPAHFNPNTGKASEYCSMKHVHEAKS--RECARSECSRTAFLANTAG--------------------LQFCSRACVNEALGETTSTVLNQTLDD---ETNCGLPG-------CQ---QKALPGGTWRSLR--FCSEAHRILFVQRTPVPFGQPSAEPYTTQVV-VARDNTSALELRFLDEGHPEHKSLADQFTSKWL-HSKPKLGVEVLNVVKIEVPREVRERHEDYKTMVPNVRRRFHGTFSSRICRFY--VGGSMCLRPDCGLCNICMRGFKIEDNVGHSPARGKRRQWLMYGKGLYFSSVSGKANDFSAETEKLAT-DGTTVRCMLVADVAAGKAFVTTEKYFPQMERPPLGYNSVVGEVGPHLNYDELVVYDPAAALPTHFVVY 354          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D7FMJ6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ6_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 2.990e-54
Identity = 135/389 (34.70%), Postives = 180/389 (46.27%), Query Frame = 1
Query:  163 CQLAGCSEPALFDDRRNCWHDFCSRSHASAAIASGQQWVRGGCGK-----GASTCRFPGCRAGVYRNQATGKVSTFAPALSLCVSVRGKCCQGHVASVELTNSLIKFFLHTICSMPASACLSSSCRLTTMTSLVGGKYPTPESNFCSKRHRDSSTGVPSRNPCILLVFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKWIKHGAPMVLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYSL 1314
            CQL GC++ +  +      +DFCSR HA  A  SG+     G G      G + C   GC     + QA G                  CC+ H  +        K+            C    C           +Y    S++C + HR+    V        L    G +  SGF L  L  +H+ Y S++ QF  KW K   P V +I  +++P  V   +  Y     N +RRFHGT  ++ C+FF   K  PC    C  C+IC  GFK+   VGTT +  +   RYG GLYFSSVSGK+NDYA  SE+ +   G R R MF+ NV  GK   T    LP + CP   +DSVVG  G  LNHDE VVY E AA+P+++IVY +
Sbjct:  257 CQLDGCAKLSAINTSTGERYDFCSRQHAQQAKNSGKAGPFNGGGAFLAVPGPAVCMLLGCA----KPQAPGY---------------DHCCKDHALAAR------KYI---------PMCTLRGCAKDAWFDPKRNQY----SSYCGRAHRNEGERV--------LQEMTGGSGGSGFRLQELDRSHQKYESVKTQFTSKWQKGNVPTVENIFLIKMPMGVVDKYLAYKNRVGNERRRFHGTSRASDCDFFTGSKKQPCSSRTCVACNICMVGFKL---VGTTKKSYA---RYGRGLYFSSVSGKSNDYADGSEQRR--NGARYRTMFLCNVAVGKAKVTEAVDLPDDQCPGKGFDSVVGNKGANLNHDETVVYDEAAAIPSYMIVYRM 591          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 8.470e-54
Identity = 107/220 (48.64%), Postives = 137/220 (62.27%), Query Frame = 1
Query:  670 ASGFTLSALAPAHRDYVSIRNQFDLKWIKH---GAPMVLHILKLEVPAAVSRSFFNYSQ-TSSNVKRRFHGTGCSARCNFFADLKGS--PCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYS 1311
            +S  TL  L     +Y ++ + F  +W+K        ++ I  ++VP  V      Y +    N+++RFHGT C+  CNF  D +G+  PC    C VC+IC  GFK+  NV  TAR + I LRYG G+YFSSVSGKANDYA  S K     G  LRCMFVANV  GK +ST +  LP++ CPP+   SVVGE G ALN+DE+VVYKEEAALPTHLIVY+
Sbjct:  457 SSSSTLRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVRIFSIQVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGS-DGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEVGHALNYDEVVVYKEEAALPTHLIVYA 675          
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Match: D7FXR1_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR1_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.700e-53
Identity = 96/176 (54.55%), Postives = 111/176 (63.07%), Query Frame = 1
Query:  793 EVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFFADLKG--SPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSSVSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCPPANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYSL 1314
            EV   V      Y     N+ +RFHGT C+  CNF  D +G  +PC    C VC+IC  GFK+  NV  TAR T   LRYGEG+Y +SVSGKANDYA+ S K +      LRCMFVANV  G+ + T   SLP N CPP  Y SVVGE G+ LN DE VVY EEAALPTHLIVY+L
Sbjct:   55 EVSREVREEHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGFPLRYGEGVYLTSVSGKANDYASRSAK-KIGNDSELRCMFVANVAVGRTFKTKSTSLPANQCPPPGYQSVVGEVGRGLNFDEFVVYDEEAALPTHLIVYAL 229          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9365.18361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS87_ECTSI1.870e-10644.74PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS86_ECTSI1.580e-9539.83PARP catalytic domain-containing protein n=2 Tax=E... [more]
D8LKU8_ECTSI3.110e-8659.64PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS88_ECTSI2.770e-7938.65PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU6_ECTSI2.170e-7751.98PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JBF5_9PHAE4.810e-5745.61PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS85_ECTSI4.060e-5536.46PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7FMJ6_ECTSI2.990e-5434.70PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU5_ECTSI8.470e-5448.64TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
D7FXR1_ECTSI1.700e-5354.55PARP catalytic domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9365contigL-elsbetiae_contig9365:291..3994 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score334.7
Seed ortholog evalue6.4e-89
Seed eggNOG ortholog2880.D8LS87
Hectar predicted targeting categoryother localisation
EggNOG OGs28J37@1,2S14A@2759
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-12_004430.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1320
Cds size1320
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9365.18361.1prot_L-elsbetiae_contig9365.18361.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9365 291..3994 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817005.89001-CDS-L-elsbetiae_contig9365:290..4581622817005.89001-CDS-L-elsbetiae_contig9365:290..458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 291..458 +
1691683977.2697885-CDS-L-elsbetiae_contig9365:290..4581691683977.2697885-CDS-L-elsbetiae_contig9365:290..458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 291..458 +
1622817005.9015918-CDS-L-elsbetiae_contig9365:828..11161622817005.9015918-CDS-L-elsbetiae_contig9365:828..1116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 829..1116 +
1691683977.2819295-CDS-L-elsbetiae_contig9365:828..11161691683977.2819295-CDS-L-elsbetiae_contig9365:828..1116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 829..1116 +
1622817005.914756-CDS-L-elsbetiae_contig9365:1397..15111622817005.914756-CDS-L-elsbetiae_contig9365:1397..1511Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 1398..1511 +
1691683977.2917936-CDS-L-elsbetiae_contig9365:1397..15111691683977.2917936-CDS-L-elsbetiae_contig9365:1397..1511Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 1398..1511 +
1622817005.9298255-CDS-L-elsbetiae_contig9365:1593..18181622817005.9298255-CDS-L-elsbetiae_contig9365:1593..1818Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 1594..1818 +
1691683977.3011303-CDS-L-elsbetiae_contig9365:1593..18181691683977.3011303-CDS-L-elsbetiae_contig9365:1593..1818Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 1594..1818 +
1622817005.9421847-CDS-L-elsbetiae_contig9365:2338..24551622817005.9421847-CDS-L-elsbetiae_contig9365:2338..2455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 2339..2455 +
1691683977.3109858-CDS-L-elsbetiae_contig9365:2338..24551691683977.3109858-CDS-L-elsbetiae_contig9365:2338..2455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 2339..2455 +
1622817005.9538379-CDS-L-elsbetiae_contig9365:2913..31071622817005.9538379-CDS-L-elsbetiae_contig9365:2913..3107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 2914..3107 +
1691683977.3214495-CDS-L-elsbetiae_contig9365:2913..31071691683977.3214495-CDS-L-elsbetiae_contig9365:2913..3107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 2914..3107 +
1622817005.96766-CDS-L-elsbetiae_contig9365:3397..35211622817005.96766-CDS-L-elsbetiae_contig9365:3397..3521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 3398..3521 +
1691683977.334133-CDS-L-elsbetiae_contig9365:3397..35211691683977.334133-CDS-L-elsbetiae_contig9365:3397..3521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 3398..3521 +
1622817005.978232-CDS-L-elsbetiae_contig9365:3904..39941622817005.978232-CDS-L-elsbetiae_contig9365:3904..3994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 3905..3994 +
1691683977.3474283-CDS-L-elsbetiae_contig9365:3904..39941691683977.3474283-CDS-L-elsbetiae_contig9365:3904..3994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9365 3905..3994 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9365.18361.1

>prot_L-elsbetiae_contig9365.18361.1 ID=prot_L-elsbetiae_contig9365.18361.1|Name=mRNA_L-elsbetiae_contig9365.18361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=440bp
MAARTLPVCAFPGCQKRCWLEQSGKVHPFCGITHAGEAKKKGMSGVGAGH
QNRTCQLAGCSEPALFDDRRNCWHDFCSRSHASAAIASGQQWVRGGCGKG
ASTCRFPGCRAGVYRNQATGKVSTFAPALSLCVSVRGKCCQGHVASVELT
NSLIKFFLHTICSMPASACLSSSCRLTTMTSLVGGKYPTPESNFCSKRHR
DSSTGVPSRNPCILLVFRVGTTRASGFTLSALAPAHRDYVSIRNQFDLKW
IKHGAPMVLHILKLEVPAAVSRSFFNYSQTSSNVKRRFHGTGCSARCNFF
ADLKGSPCEGMDCRVCSICTRGFKINGNVGTTARRTSISLRYGEGLYFSS
VSGKANDYAAFSEKVQCCRGRRLRCMFVANVCAGKEYSTMQGSLPKNMCP
PANYDSVVGEAGQALNHDELVVYKEEAALPTHLIVYSLP*
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mRNA from alignment at L-elsbetiae_contig9365:291..3994+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9365.18361.1 ID=mRNA_L-elsbetiae_contig9365.18361.1|Name=mRNA_L-elsbetiae_contig9365.18361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3704bp|location=Sequence derived from alignment at L-elsbetiae_contig9365:291..3994+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGCCAGGACGCTCCCCGTGTGTGCCTTCCCAGGGTGTCAGAAGCG GTGCTGGTTGGAACAAAGCGGGAAGGTTCACCCGTTCTGCGGCATCACCC ATGCCGGGGAAGCTAAGAAGAAGGGGATGTCTGGCGTGGGTGCAGGCCAT CAGAACAGAACCTGCCAGGTGAGGCACGCGCCAGGAAGGAAACTGGAGTG GTGGTGCCTACAATAGCGGCACACCCGACAACGTTCGATTACGCGTGTGC ATTCGATGCTCTGGCCGCACCATAATACCTCACGTACAGAGGTAGCGCGT ATTCTCCGGCTGGATGACCAACTCTCAGTCCTACGGCCCCTGACCACCCC GAAGGACCGCCTCCAAATGGCGAGGAGCCGGGCCGGTTGTGAAGTTCAGC AAGAAAGAGATGCGACTCGTCTCTTCCACAGAGTGGTATTACACGAATGC GAATCCTCGGTCGTTCGCGCTAGGATCAACAGCCGATGCGTTGTATGTGC GTTGTTTGGTTCTCCATTTTTCTGCGCGCATTCAAAAGCTGGCTGGATGC TCGGAGCCAGCTTTATTCGACGACAGGAGGAACTGTTGGCATGATTTCTG CTCAAGAAGCCACGCATCTGCTGCGATTGCCAGCGGACAGCAGTGGGTCC GTGGTGGATGTGGCAAGGGTGCCTCAACATGCAGGTTTCCCGGTTGTCGA GCTGGCGTGTACCGTAACCAAGCCACCGGCAAGGTGAGTACGTTCGCACC TGCGTTGTCACTCTGTGTTTCGGTGCGCGGTAAATGCTGTCAAGGACATG TGGCCTCTGTGGAATTGACGAACAGTGTTTGGCCTTTTGGCCTTTTTATC ACCACAGAGCAAACGAGCGCAGGCGATAGCTGAGTTGCCGTTGTGGCATG CTTCAAGCTCTACTGCTGTGCTTCAATATTGACCATGCTTTTCTCTCAAA AGTCAGGCGTTGGCAGGGCCGCCTTTTGACAAGAATTGCATGTGGGCTCC TACCCCTCTTTGATGCCTTGCCAAACTCGAAAAACTTGGTGTATGCGCTT TCTGTCTGCAGCCTCAAACTATCGCTTCAACTTGACTGGAGATCCCTGCG GGCGGAGCTCATAAAGTTTTTTCTTCATACAATCTGTAGCATGCCTGCTT CCGCATGCTTATCGTCGAGCTGCCGGCTGACTACCATGACATCACTTGTA GGCGGAAAATATCCGACCCCTGTCATTGTTGAGCCTACCGCATGATCACT CGACCCCCACGCTGCTCGCTCTGTCGGAATTCGGGCCACTCTGTGCGACG AAGGAATCCAACTTCTGCAGCAAGAGACACCGGGACAGCTCGACGGGCGT GCCATCAAGGAATCCCTGCATCCTTTTGGTCTTCAGGGTGGGCACCACCA GGGCATCTGGCTTCACGCTGAGTGCTCTTGCGCCGGCTCACCGTGATTAC GTATCGATTCGCAATCAATTCGATTTGAAGTGGATCAAGCACGGTGCGCC CATGGTGCTCCACATCCTGAAGTTGGAGGTACGCCCTTAATTTTGGCATG CATACTTGTACGGAGTTATTCGCTTCGCGACATGTTTTCCCTCTGGCGTA CTGCAAGCGGTAGTGTAGGCCATGAGTGCATCGGTACTTTGAGCTGTTTG TTCGCCTGTCGAAAGGTCAAGCGTATAGCGTGAGGCCTGCGTTCAACAAA GGAACTCGTGGCTTTCCAATGCCGCTTGATGACGAAGTGCGAGACACGGG TATGTAGAGGATGCTTTCAAGTACGCTGCCGCCGTTTCTTGGTTTAGACT CTGTGCACGGGTGGCGTGGACAATGTTCACCTACACATGTAGGTCTGAGG TATTATTTTGTGATTCAGTCGTCTAGTTTGTGGGGGCTGCACGTATCAGA TCGTTTGCAAGCACTCTCCACTGTCATCAGCTCAGACACCGGGGCCCGAT ATCGTTGCATGTACTGTGTGTGACGGGCTTTTGTGGTGCACGCTTTCTCT AACCGACGATCTTTCGCTTCGACCTCGTTGGCATCTACTCTTTTGAAGGT ACCCGCAGCAGTTTCCAGGAGTTTTTTCAACTATTCTCAAACCTCGTCCA ACGTCAAGCGTCGCTTTCACGGGACTGGCTGTTCGGCCCGGTGCAACTTC TTCGCTGACCTCAAAGTAAGCGAACGCCAAGTCATGAGATCCATGGCCGC GGCCAAGCAATCGCCAATATCCCCTTAGTTCGTGCCCTTGGAACGTCAGT CATTCCTAACTCTTGCTGGCAATTGGCTATTGGCGGTTGGAGAACTAAAA ACTGAAAACGGACAACATCCACTACGTAAACCCCTTCCCCGTTCACTTGT TGACTTGTTGGGACGATTTGAAGACGTAGCGTTGTAGCCGCTTTCCGTAG AACGAAGGGATGTCAACTGCGAGAAGGCTTTTCTGGGTTTCTGTAACACC GACCAAAATTAAATTTCCCAACATCCTAAAGACTGGGGCAGACTTCGCCA TTGTGTTCACGAACGTGGTACACAATGGAACTGCACGTTCTCTTCTTGGA TATGCCCCTTTCGAGCCGACGTCCTCGCTGGTCCTCTGCTGTTACCTGTT GGTGATGAATGGAACCTTCGCAGGGAAGTCCCTGCGAAGGCATGGACTGC AGAGTGTGCAGCATCTGCACCCGCGGCTTCAAGATCAACGGAAACGTCGG CACCACGGCGAGAAGGACCAGCATCAGCCTGCGCTATGGGGAGGGTCTCT ACTTCAGTAGCGTGTCTGGGAAGGCCAACGACTACGCCGCGTTCTCCGAA AAGGTACAATGCTGCCGGTAGGTTGCTATGGTATTGGTGTGGCCGCGTTT TCTGGAGTTCCATCGTCAATGACAAAACGAAGGTCTCGAAGACGCAAAGC AGTTCTCTGGAGTCCGGGAAAGGGCCGCGGTGTGCGGCGTCGGTTTCCAC TCGAAACCACCGCAAATATCTGCCGCCTATAGTCTGCCGTTTGGCGTCGA ACCATGATCATTCATCAGAGCGATGATGCCTATCACCACTTCGTTGTCCC TTACTCATCACCATCTTTACTCACCCACTGATTCATCTGGGTCTCGCAGA ACATCAGTGGCAGACGGCTGAGGTGTATGTTTGTCGCCAACGTCTGCGCG GGCAAGGAATACTCCACCATGCAAGGGTCCCTCCCGAAAAACATGTGCCC CCCCGCAAACTACGACTCCGTCGTAGGCGAGGTGAGAGGCGAACGTACGA GCGCGCATTTTTGATCTGCAGCTTTACAGGTGTCTTTGATGTGCAATCGT GGCCTGAAAGAGTAAGCTCTGAGCTCCGACGCCCTGATTTGCCCCGCCCT TCTCCTCTGATCTTAGCTTTCCTGCGGTGGGTGTGCTGCGGACGTCTTGC CATGATCCCCAGCCGTATTGCCACAATGTAGGTCACGCAGTACCGACGGT GATCATATCGTCATCCCAAATTGTCTGCTGCGTCAGTCATGTTGGGCGCT TTAGTGCACTTTTGCCCTGGTATTGCAGAGAAACGTGTATCGCGGAATCT ACTTTTCGACCATGCTGACGAAACGTTTTTTGTTCACATTCGAAACCGAT GTTCCCTGTGGCAGGCGGGTCAGGCGCTGAATCACGACGAGTTGGTGGTG TACAAGGAGGAGGCTGCCCTTCCCACCCACCTGATCGTTTACTCTCTCCC TTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9365:291..3994+

>mRNA_L-elsbetiae_contig9365.18361.1 ID=mRNA_L-elsbetiae_contig9365.18361.1|Name=mRNA_L-elsbetiae_contig9365.18361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2640bp|location=Sequence derived from alignment at L-elsbetiae_contig9365:291..3994+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGCCAGGACGCTCCCCGTGTGTGCCTTCCCAGGGTGTCAGAAGCG
GTGCTGGTTGGAACAAAGCGGGAAGGTTCACCCGTTCTGCGGCATCACCC
ATGCCGGGGAAGCTAAGAAGAAGGGGATGTCTGGCGTGGGTGCAGGCCAT
CAGAACAGAACCTGCCAGATGGCCGCCAGGACGCTCCCCGTGTGTGCCTT
CCCAGGGTGTCAGAAGCGGTGCTGGTTGGAACAAAGCGGGAAGGTTCACC
CGTTCTGCGGCATCACCCATGCCGGGGAAGCTAAGAAGAAGGGGATGTCT
GGCGTGGGTGCAGGCCATCAGAACAGAACCTGCCAGCTGGCTGGATGCTC
GGAGCCAGCTTTATTCGACGACAGGAGGAACTGTTGGCATGATTTCTGCT
CAAGAAGCCACGCATCTGCTGCGATTGCCAGCGGACAGCAGTGGGTCCGT
GGTGGATGTGGCAAGGGTGCCTCAACATGCAGGTTTCCCGGTTGTCGAGC
TGGCGTGTACCGTAACCAAGCCACCGGCAAGGTGAGTACGTTCGCACCTG
CGTTGTCACTCTGTGTTTCGGTGCGCGGTAAATGCTGTCAAGGACATGTG
GCCTCTGTGGAATTGACGAACAGTCTGGCTGGATGCTCGGAGCCAGCTTT
ATTCGACGACAGGAGGAACTGTTGGCATGATTTCTGCTCAAGAAGCCACG
CATCTGCTGCGATTGCCAGCGGACAGCAGTGGGTCCGTGGTGGATGTGGC
AAGGGTGCCTCAACATGCAGGTTTCCCGGTTGTCGAGCTGGCGTGTACCG
TAACCAAGCCACCGGCAAGGTGAGTACGTTCGCACCTGCGTTGTCACTCT
GTGTTTCGGTGCGCGGTAAATGCTGTCAAGGACATGTGGCCTCTGTGGAA
TTGACGAACAGTCTCATAAAGTTTTTTCTTCATACAATCTGTAGCATGCC
TGCTTCCGCATGCTTATCGTCGAGCTGCCGGCTGACTACCATGACATCAC
TTGTAGGCGGAAAATATCCGACCCCTCTCATAAAGTTTTTTCTTCATACA
ATCTGTAGCATGCCTGCTTCCGCATGCTTATCGTCGAGCTGCCGGCTGAC
TACCATGACATCACTTGTAGGCGGAAAATATCCGACCCCTGAATCCAACT
TCTGCAGCAAGAGACACCGGGACAGCTCGACGGGCGTGCCATCAAGGAAT
CCCTGCATCCTTTTGGTCTTCAGGGTGGGCACCACCAGGGCATCTGGCTT
CACGCTGAGTGCTCTTGCGCCGGCTCACCGTGATTACGTATCGATTCGCA
ATCAATTCGATTTGAAGTGGATCAAGCACGGTGCGCCCATGGTGCTCCAC
ATCCTGAAGTTGGAGGAATCCAACTTCTGCAGCAAGAGACACCGGGACAG
CTCGACGGGCGTGCCATCAAGGAATCCCTGCATCCTTTTGGTCTTCAGGG
TGGGCACCACCAGGGCATCTGGCTTCACGCTGAGTGCTCTTGCGCCGGCT
CACCGTGATTACGTATCGATTCGCAATCAATTCGATTTGAAGTGGATCAA
GCACGGTGCGCCCATGGTGCTCCACATCCTGAAGTTGGAGGTACCCGCAG
CAGTTTCCAGGAGTTTTTTCAACTATTCTCAAACCTCGTCCAACGTCAAG
CGTCGCTTTCACGGGACTGGCTGTTCGGCCCGGTGCAACTTCTTCGCTGA
CCTCAAAGTACCCGCAGCAGTTTCCAGGAGTTTTTTCAACTATTCTCAAA
CCTCGTCCAACGTCAAGCGTCGCTTTCACGGGACTGGCTGTTCGGCCCGG
TGCAACTTCTTCGCTGACCTCAAAGGAAGTCCCTGCGAAGGCATGGACTG
CAGAGTGTGCAGCATCTGCACCCGCGGCTTCAAGATCAACGGAAACGTCG
GCACCACGGCGAGAAGGACCAGCATCAGCCTGCGCTATGGGGAGGGTCTC
TACTTCAGTAGCGTGTCTGGGAAGGCCAACGACTACGCCGCGTTCTCCGA
AAAGGTACAATGCTGCCGGGAAGTCCCTGCGAAGGCATGGACTGCAGAGT
GTGCAGCATCTGCACCCGCGGCTTCAAGATCAACGGAAACGTCGGCACCA
CGGCGAGAAGGACCAGCATCAGCCTGCGCTATGGGGAGGGTCTCTACTTC
AGTAGCGTGTCTGGGAAGGCCAACGACTACGCCGCGTTCTCCGAAAAGGT
ACAATGCTGCCGTGGCAGACGGCTGAGGTGTATGTTTGTCGCCAACGTCT
GCGCGGGCAAGGAATACTCCACCATGCAAGGGTCCCTCCCGAAAAACATG
TGCCCCCCCGCAAACTACGACTCCGTCGTAGGCGAGTGGCAGACGGCTGA
GGTGTATGTTTGTCGCCAACGTCTGCGCGGGCAAGGAATACTCCACCATG
CAAGGGTCCCTCCCGAAAAACATGTGCCCCCCCGCAAACTACGACTCCGT
CGTAGGCGAGGCGGGTCAGGCGCTGAATCACGACGAGTTGGTGGTGTACA
AGGAGGAGGCTGCCCTTCCCACCCACCTGATCGTTTACTCTCTCCCTTAA
GCGGGTCAGGCGCTGAATCACGACGAGTTGGTGGTGTACAAGGAGGAGGC
TGCCCTTCCCACCCACCTGATCGTTTACTCTCTCCCTTAA
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