prot_L-elsbetiae_contig9296.18293.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9296.18293.1
Unique Nameprot_L-elsbetiae_contig9296.18293.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length61
Homology
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.250e-25
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVEGGGGKGREGRNA 60
            MEL S+ IVRTYS RVYGNITEEKLRAM+SGCT IDGVRYKGMFVRVEGGGGKGREGRNA
Sbjct:  255 MELPSSNIVRTYSVRVYGNITEEKLRAMRSGCT-IDGVRYKGMFVRVEGGGGKGREGRNA 313          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 8.550e-11
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0
Query:   28 MQSGCTIIDGVRYKGMFVRVEGGGGKGREGRNA 60
            M+SGCT IDGVRYKGMFVRVEGGGGKGREGRNA
Sbjct:    1 MRSGCT-IDGVRYKGMFVRVEGGGGKGREGRNA 32          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: A0A7S2KG34_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KG34_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.410e-6
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVEGGGGKG 54
            +EL S  + RTY ARV+G +T  KL A++ G   I+GVRYKGM VR+EG   KG
Sbjct:  180 LELPSNALHRTYRARVHGRLTFGKLSAIRRGVE-INGVRYKGMDVRIEGNLKKG 232          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: A0A7G9SGS5_9SPHN (Pseudouridine synthase n=1 Tax=Sphingomonas lutea TaxID=1045317 RepID=A0A7G9SGS5_9SPHN)

HSP 1 Score: 51.6 bits (122), Expect = 4.080e-6
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVEGGGGKGR 55
            +EL  TG+VRTY AR YG IT+++L ++  G T I+GVRY  +   +E   G+ R
Sbjct:  154 LELPRTGVVRTYRARAYGEITQDQLESLAEGFT-IEGVRYGSINANLERSSGRNR 207          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: A0A7G9S8P3_9SPHN (Pseudouridine synthase n=1 Tax=Sphingomonas rhizophila TaxID=2071607 RepID=A0A7G9S8P3_9SPHN)

HSP 1 Score: 51.2 bits (121), Expect = 5.830e-6
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVE 48
            +EL STG+VRTY AR +G+IT+E L  +  G T IDGVRY  +   +E
Sbjct:  167 LELPSTGVVRTYRARAFGDITQEALEDLAEGIT-IDGVRYGSIDANLE 213          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: A5P779_9SPHN (Pseudouridine synthase n=16 Tax=Erythrobacteraceae TaxID=335929 RepID=A5P779_9SPHN)

HSP 1 Score: 50.1 bits (118), Expect = 1.400e-5
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVEGGGGKGR 55
            MEL STG+ RTY AR +G+IT+++L  +  G   IDG+RY  +   +E G G+ R
Sbjct:  135 MELPSTGVPRTYRARAFGDITQQRLDDLIEGIA-IDGIRYGQIEANLERGSGRNR 188          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: UPI00201E66BB (rRNA pseudouridine synthase n=1 Tax=Sphingomonas sp. RG327 TaxID=2908207 RepID=UPI00201E66BB)

HSP 1 Score: 50.1 bits (118), Expect = 1.410e-5
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    2 ELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVE 48
            EL  TG+VRTY AR +GN+T+E+L A+  G T ++GV Y  +   +E
Sbjct:  143 ELPKTGVVRTYRARAFGNVTQEQLEALSEGVT-VEGVNYGSINANLE 188          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: UPI00201CE941 (rRNA pseudouridine synthase n=1 Tax=Sphingomonas sp. SE158 TaxID=2908208 RepID=UPI00201CE941)

HSP 1 Score: 49.7 bits (117), Expect = 1.780e-5
Identity = 23/55 (41.82%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVEGGGGKGR 55
            +EL  TG+VR+Y AR +G++T+ +L  +  G T I+GVRY  +   +E G G+ R
Sbjct:  119 LELPKTGVVRSYRARAFGDVTQAQLEDLSEGIT-IEGVRYGSIDANLERGSGRNR 172          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: A0A3N9RXB9_9SPHN (Pseudouridine synthase n=5 Tax=unclassified Novosphingobium TaxID=2644732 RepID=A0A3N9RXB9_9SPHN)

HSP 1 Score: 49.7 bits (117), Expect = 2.120e-5
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVE 48
            MEL STG+ RTY AR +G+IT+E+L A+  G   I+G+RY  +   +E
Sbjct:  176 MELPSTGVPRTYRARTFGDITQERLEALSEGVE-IEGIRYGSIDANME 222          
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Match: UPI001F234ACC (rRNA pseudouridine synthase n=1 Tax=Sphingomonas sp. G124 TaxID=2904799 RepID=UPI001F234ACC)

HSP 1 Score: 49.3 bits (116), Expect = 2.800e-5
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVE 48
            +EL STG+VR Y AR +G++T+ +L A+  G T IDG+RY  +   +E
Sbjct:  159 LELPSTGVVRRYRARAFGDVTQAQLEALSEGVT-IDGIRYGSIDANLE 205          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9296.18293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LDE8_ECTSI1.250e-2590.00RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J790_9PHAE8.550e-1193.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2KG34_9STRA2.410e-653.70Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7G9SGS5_9SPHN4.080e-645.45Pseudouridine synthase n=1 Tax=Sphingomonas lutea ... [more]
A0A7G9S8P3_9SPHN5.830e-652.08Pseudouridine synthase n=1 Tax=Sphingomonas rhizop... [more]
A5P779_9SPHN1.400e-545.45Pseudouridine synthase n=16 Tax=Erythrobacteraceae... [more]
UPI00201E66BB1.410e-546.81rRNA pseudouridine synthase n=1 Tax=Sphingomonas s... [more]
UPI00201CE9411.780e-541.82rRNA pseudouridine synthase n=1 Tax=Sphingomonas s... [more]
A0A3N9RXB9_9SPHN2.120e-547.92Pseudouridine synthase n=5 Tax=unclassified Novosp... [more]
UPI001F234ACC2.800e-545.83rRNA pseudouridine synthase n=1 Tax=Sphingomonas s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9296contigL-elsbetiae_contig9296:1618..2472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9296.18293.1mRNA_L-elsbetiae_contig9296.18293.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9296 1595..2549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9296.18293.1 ID=prot_L-elsbetiae_contig9296.18293.1|Name=mRNA_L-elsbetiae_contig9296.18293.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp
MELSSTGIVRTYSARVYGNITEEKLRAMQSGCTIIDGVRYKGMFVRVEGG
GGKGREGRNA*
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