mRNA_L-elsbetiae_contig91.18131.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig91.18131.1
Unique NamemRNA_L-elsbetiae_contig91.18131.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 1.770e-58
Identity = 88/98 (89.80%), Postives = 92/98 (93.88%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEAL 294
            MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWE+CTL KPFAGMSV DHYREVI GGLRPPLDPRWP ALQHLLQACWHEDPD+RPSI EA++ L
Sbjct:  234 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVL 331
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 4.020e-46
Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEALR 297
            MSGMAGSKRFM+PEVC GL YNEKVDVYSFA+VLW++C L KPFAGMS  DHY +V+ GGLRPPLD RWP  L HLLQACWH  PD RP++++A++ LR
Sbjct:  193 MSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLR 291
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.220e-34
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEALRR 300
            M+G  GS+RFM+PEV  G+PYNEK D+YS+ IVLWELC L KPFAGMS  +H R+V   G+RPPLD RWP  L+ LL++CWH + ++RP   +A E L R
Sbjct:  263 MTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLAR 362
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.660e-28
Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSI 273
            M+G  GS R+M+PEV + LPYNEKVDVY+F ++LWE+    + F GMSV D Y+ V+ GG+RPPLD  WP AL+ L+  CWH D D+RP  
Sbjct:  326 MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDF 416
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A1Z5K598_FISSO (Protein kinase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K598_FISSO)

HSP 1 Score: 112 bits (281), Expect = 1.480e-27
Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEALR 297
            MSG  GS+RFM+PEV    PY+   D+YSFAI+ WE+ TL K FA ++VDDH+ +VI G  RP LDP W ++L  +LQ CWH  P +RPS  EA  ALR
Sbjct:  278 MSGGTGSRRFMAPEVALSEPYHLSADMYSFAILFWEILTLDKAFARLTVDDHHEKVIQGTERPELDPGWTSSLCEILQGCWHYKPHRRPSAKEAHRALR 376
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A7S1ZVA0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZVA0_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.170e-27
Identity = 51/98 (52.04%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEAL 294
            MSG  GS R+M+PEV K LPYN+K DVYSF I+LWEL    KP+ GM+ D+ Y  V+ G  RPP++ +WP  L  L+Q CW  D   RPS  E  E L
Sbjct:  104 MSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERL 201
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A6V4M4K7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6V4M4K7_9EUKA)

HSP 1 Score: 107 bits (266), Expect = 2.230e-27
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRP 267
            M+G  GS R+M+PEV   LPYNEK DV+SFA++L++L +  KPF+GM ++  Y +VI GG RP +  +WPA+++ LL+ CWH DPD RP
Sbjct:   55 MTGKTGSARYMAPEVALSLPYNEKADVHSFAMILYQLLSHEKPFSGMDLEMLYTDVIYGGQRPKVPRQWPASMRDLLRDCWHPDPDCRP 143
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.850e-26
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEAL 294
            M+G  GS R+M+PEV +  PYNEKVDVYSF I+LWE+ TL KPF GM  D    +VI G  RPP+  +WP     L+Q+CW EDP +RPS  +  + L
Sbjct:  455 MTGETGSVRYMAPEVAESRPYNEKVDVYSFGIILWEMSTLKKPFDGMGHDRFLSQVIRGSHRPPVHKKWPKPWSELMQSCWAEDPSKRPSFAKVGDLL 552
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 4.270e-26
Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEAL 294
            M+G  GS R+M PEV   LPYNEK DVYSF ++LWE+ +L +PF G++  +  + VI GG RPPL   W AAL+ L++ CW ED D RP   E ++ L
Sbjct:  252 MTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTL 349
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BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.480e-25
Identity = 51/98 (52.04%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    1 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVDDHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEAL 294
            MSG  GS R+M+PEV K LPYN+K DVYSF I+LWEL    KP+ GM+ D+ Y  V+ G  RPP++ +WP  L  L+Q CW  D   RPS  E  E L
Sbjct:  546 MSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERL 643
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig91.18131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMU8_9PHAE1.770e-5889.80Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5L2N4_9PHAE4.020e-4671.72Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5K4Q0_9PHAE2.220e-3458.00Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835ZE86_9STRA2.660e-2854.95Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A1Z5K598_FISSO1.480e-2754.55Protein kinase domain-containing protein n=1 Tax=F... [more]
A0A7S1ZVA0_9STRA2.170e-2752.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6V4M4K7_9EUKA2.230e-2752.81Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6H5JUQ3_9PHAE1.850e-2652.04Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5LAW2_9PHAE4.270e-2650.00Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6V2JN82_9STRA1.480e-2552.04Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig91contigL-elsbetiae_contig91:59226..59525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.0
Seed ortholog evalue6.8e-47
Seed eggNOG ortholog2880.D7FPX1
KEGG koko:K14304
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Exons1
Model size300
Cds size300
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816985.5113316-CDS-L-elsbetiae_contig91:59225..595251622816985.5113316-CDS-L-elsbetiae_contig91:59225..59525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 59226..59525 -
1691683961.9990945-CDS-L-elsbetiae_contig91:59225..595251691683961.9990945-CDS-L-elsbetiae_contig91:59225..59525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 59226..59525 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig91.18131.1prot_L-elsbetiae_contig91.18131.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig91 59226..59525 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig91.18131.1

>prot_L-elsbetiae_contig91.18131.1 ID=prot_L-elsbetiae_contig91.18131.1|Name=mRNA_L-elsbetiae_contig91.18131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLHKPFAGMSVD
DHYREVIIGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKEALRR
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mRNA from alignment at L-elsbetiae_contig91:59226..59525-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig91.18131.1 ID=mRNA_L-elsbetiae_contig91.18131.1|Name=mRNA_L-elsbetiae_contig91.18131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=300bp|location=Sequence derived from alignment at L-elsbetiae_contig91:59226..59525- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAGGCATGGCGGGCAGCAAGCGGTTCATGAGCCCGGAGGTCTGCAA
GGGACTGCCGTACAACGAGAAGGTGGATGTCTACTCGTTCGCCATCGTGT
TGTGGGAGCTCTGCACGCTCCACAAGCCGTTCGCCGGCATGAGCGTGGAC
GACCACTACCGCGAGGTGATCATCGGCGGGTTGAGGCCGCCGTTGGACCC
GCGATGGCCGGCCGCCCTGCAACACCTTCTGCAGGCATGCTGGCACGAGG
ACCCGGACCAGCGGCCGTCGATCTTGGAGGCCAAGGAGGCCCTGCGGCGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig91:59226..59525-

>mRNA_L-elsbetiae_contig91.18131.1 ID=mRNA_L-elsbetiae_contig91.18131.1|Name=mRNA_L-elsbetiae_contig91.18131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=600bp|location=Sequence derived from alignment at L-elsbetiae_contig91:59226..59525- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAGGCATGGCGGGCAGCAAGCGGTTCATGAGCCCGGAGGTCTGCAA
GGGACTGCCGTACAACGAGAAGGTGGATGTCTACTCGTTCGCCATCGTGT
TGTGGGAGCTCTGCACGCTCCACAAGCCGTTCGCCGGCATGAGCGTGGAC
GACCACTACCGCGAGGTGATCATCGGCGGGTTGAGGCCGCCGTTGGACCC
GCGATGGCCGGCCGCCCTGCAACACCTTCTGCAGGCATGCTGGCACGAGG
ACCCGGACCAGCGGCCGTCGATCTTGGAGGCCAAGGAGGCCCTGCGGCGA
ATGTCAGGCATGGCGGGCAGCAAGCGGTTCATGAGCCCGGAGGTCTGCAA
GGGACTGCCGTACAACGAGAAGGTGGATGTCTACTCGTTCGCCATCGTGT
TGTGGGAGCTCTGCACGCTCCACAAGCCGTTCGCCGGCATGAGCGTGGAC
GACCACTACCGCGAGGTGATCATCGGCGGGTTGAGGCCGCCGTTGGACCC
GCGATGGCCGGCCGCCCTGCAACACCTTCTGCAGGCATGCTGGCACGAGG
ACCCGGACCAGCGGCCGTCGATCTTGGAGGCCAAGGAGGCCCTGCGGCGA
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