prot_L-elsbetiae_contig9032.18061.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9032.18061.1
Unique Nameprot_L-elsbetiae_contig9032.18061.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 8.770e-24
Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    1 GGGGVPADEDGEDSDGLDPAHPDTCKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKVIRM 74
            G GGV  D+  EDSDGLDP HPDTCKIC    VDILFLPC H CTCS CG+ Y GK CILCR  +++ Q+VI++
Sbjct:  287 GAGGV--DDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHHCTCSRCGSAYEGKPCILCRRVVDKVQRVIKL 358          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.370e-22
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0
Query:   13 DSDGLDPAHPDTCKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKVIRM 74
            DSDGLDP HPDTCKIC    VDILFLPC HQCTCS CG+ Y GK CILCR  +++ Q+VI++
Sbjct:  955 DSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKL 1016          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 3.910e-21
Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    8 DEDGEDSDGLDPAHPDTCKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKVIRM 74
            DED  DSDGLDP HPDTCKIC    V ILFLPC HQCTC  CG+G+ GK CI+CR  + RAQ VIR+
Sbjct: 1007 DED-XDSDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRL 1072          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: UPI00117AD610 (hypothetical protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI00117AD610)

HSP 1 Score: 50.8 bits (120), Expect = 1.020e-6
Identity = 21/47 (44.68%), Postives = 27/47 (57.45%), Query Frame = 0
Query:   25 CKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKV 71
            C IC     +I+FLPC+H CTC+ CG G     C +CR PI    K+
Sbjct:    3 CIICLTSERNIVFLPCKHCCTCANCGLGL--DWCAVCREPIRELMKI 47          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: A0A6G0Z352_APHCR (Death-associated inhibitor of apoptosis 1-like n=2 Tax=Aphis TaxID=464929 RepID=A0A6G0Z352_APHCR)

HSP 1 Score: 51.2 bits (121), Expect = 1.900e-5
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0
Query:   18 DPAHPDT--CKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKV 71
            +P+ PD+  CKICF E++++LF+PCRH   C  C       LC +CR P     +V
Sbjct:  342 EPSIPDSVVCKICFKEKLEVLFMPCRHVIACIQCAVTL--DLCAICRQPFTLTMRV 395          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: A0A2S2NQ29_SCHGA (E3 ubiquitin-protein ligase n=2 Tax=Aphidini TaxID=33387 RepID=A0A2S2NQ29_SCHGA)

HSP 1 Score: 50.4 bits (119), Expect = 3.530e-5
Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 0
Query:   25 CKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKV 71
            CKICF E++++LFLPCRH   C  C      +LC +CR P     +V
Sbjct:  363 CKICFKEKLEVLFLPCRHVIACIQCAVTL--ELCAICRQPFTMTMRV 407          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: J9K8K1_ACYPI (Uncharacterized protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9K8K1_ACYPI)

HSP 1 Score: 50.4 bits (119), Expect = 3.580e-5
Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 0
Query:   18 DPAHPDT--CKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKV 71
            DP+ PD+  CKICF E++++LF+PC H   C  C       LC +CR P     +V
Sbjct:  449 DPSAPDSVLCKICFKEKLEVLFMPCGHVIACIQCAVTL--DLCAVCRQPFTMTMRV 502          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: UPI001C8F3C3F (hypothetical protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001C8F3C3F)

HSP 1 Score: 47.8 bits (112), Expect = 3.640e-5
Identity = 20/47 (42.55%), Postives = 26/47 (55.32%), Query Frame = 0
Query:   25 CKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKV 71
            C IC     +I+FLPC+H CTC+ CG       C +CR PI    K+
Sbjct:   38 CIICLTSERNIVFLPCKHCCTCAKCGLSL--DWCAVCREPIRELMKI 82          
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Match: UPI00100FA491 (death-associated inhibitor of apoptosis 1-like n=1 Tax=Aphis gossypii TaxID=80765 RepID=UPI00100FA491)

HSP 1 Score: 49.3 bits (116), Expect = 9.070e-5
Identity = 21/47 (44.68%), Postives = 27/47 (57.45%), Query Frame = 0
Query:   25 CKICFCERVDILFLPCRHQCTCSGCGAGYRGKLCILCRAPIERAQKV 71
            CKICF E++++LFLPCRH   C  C       LC +CR P     +V
Sbjct:  393 CKICFKEKLEVLFLPCRHVIACIQCAVTL--DLCAICRQPFTLTMRV 437          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9032.18061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JKP4_9PHAE8.770e-2463.51RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FX21_ECTSI2.370e-2267.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8V2_9PHAE3.910e-2167.16RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI00117AD6101.020e-644.68hypothetical protein n=1 Tax=Klebsiella pneumoniae... [more]
A0A6G0Z352_APHCR1.900e-541.07Death-associated inhibitor of apoptosis 1-like n=2... [more]
A0A2S2NQ29_SCHGA3.530e-544.68E3 ubiquitin-protein ligase n=2 Tax=Aphidini TaxID... [more]
J9K8K1_ACYPI3.580e-541.07Uncharacterized protein n=2 Tax=Acyrthosiphon pisu... [more]
UPI001C8F3C3F3.640e-542.55hypothetical protein n=1 Tax=Klebsiella pneumoniae... [more]
UPI00100FA4919.070e-544.68death-associated inhibitor of apoptosis 1-like n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 12..81
e-value: 3.2E-13
score: 50.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 23..67
e-value: 1.2E-10
score: 41.1
NoneNo IPR availablePANTHERPTHR22996MAHOGUNINcoord: 9..72
NoneNo IPR availablePANTHERPTHR22996:SF0E3 UBIQUITIN-PROTEIN LIGASE LOG2-RELATEDcoord: 9..72
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 25..62
score: 8.506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9032contigL-elsbetiae_contig9032:2084..3148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9032.18061.1mRNA_L-elsbetiae_contig9032.18061.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9032 1678..3148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9032.18061.1 ID=prot_L-elsbetiae_contig9032.18061.1|Name=mRNA_L-elsbetiae_contig9032.18061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
GGGGVPADEDGEDSDGLDPAHPDTCKICFCERVDILFLPCRHQCTCSGCG
AGYRGKLCILCRAPIERAQKVIRMHIKQGTTARAFIHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING