prot_L-elsbetiae_contig903.18054.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig903.18054.1
Unique Nameprot_L-elsbetiae_contig903.18054.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length143
Homology
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BLAST of mRNA_L-elsbetiae_contig903.18054.1 vs. uniprot
Match: A0A6H5LDY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDY4_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.490e-13
Identity = 82/165 (49.70%), Postives = 94/165 (56.97%), Query Frame = 0 
Query:    1 MAMERSSPPPPRLKPPRLPRRPVGLGVAAGKAPA-----------GTDNFIPPRGPPAFRPNDEDSCLDLAKLMLSPEGLAMKKITLEGFSIPVVLRLLDRRXXXXXXXXXXXXXXXXXXXXXAA------------------LSITWVPQDTFGFDMRGLTTRR 136
            M  E   P P   KPP LP RP     A  +  A           G D+     G  +   +DE   L LAKLMLS EGLAM+KITLEG+S+PV LRLLDRRXXXXXXXXXXXXXXXXXXXXX                    L+ITW+  DTFGFD+RG+T+ R
Sbjct:   36 MKQETRRPSPRPRKPPLLPFRPSHPSSAVAEPDADAAAKRAAESIGADDDAAAAGLVSSAAHDE-RLLHLAKLMLSTEGLAMRKITLEGYSVPVALRLLDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXACGGASGEGITSPLLAITWLDSDTFGFDLRGVTSIR 199
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BLAST of mRNA_L-elsbetiae_contig903.18054.1 vs. uniprot
Match: D7FIV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV6_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.030e-10
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 0 
Query:   63 MLSPEGLAMKKITLEGFSIPVVLRLLDRRXXXXXXXXXXXXXXXXXXXXXAA-----------LSITWVPQDTFGFDMRGLTTRR 136
            MLSPEGLAM+K+TLEG+S+PV LRLLDRRXXXXXXXXXXXXXXXXXXXXX             L+ITW+  DTFGFD+RG+T+ R
Sbjct:    1 MLSPEGLAMRKVTLEGYSVPVALRLLDRRXXXXXXXXXXXXXXXXXXXXXXXXASGEGIISPLLAITWLDSDTFGFDLRGVTSIR 85
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig903.18054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LDY4_9PHAE5.490e-1349.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV6_ECTSI1.030e-1069.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig903contigL-elsbetiae_contig903:28139..28567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig903.18054.1mRNA_L-elsbetiae_contig903.18054.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig903 27052..28567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig903.18054.1 ID=prot_L-elsbetiae_contig903.18054.1|Name=mRNA_L-elsbetiae_contig903.18054.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp
MAMERSSPPPPRLKPPRLPRRPVGLGVAAGKAPAGTDNFIPPRGPPAFRP
NDEDSCLDLAKLMLSPEGLAMKKITLEGFSIPVVLRLLDRRRPQQEQQEQ
QQQRFFSTSNAAAALSITWVPQDTFGFDMRGLTTRRVEGCGGK
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