mRNA_L-elsbetiae_contig8860.17883.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A6H5K1R5_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R5_9PHAE) HSP 1 Score: 226 bits (576), Expect = 2.550e-69 Identity = 126/177 (71.19%), Postives = 138/177 (77.97%), Query Frame = 3
Query: 3 LRTKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQHLGGFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALDSPMVGRSDVVTSPSPAGADSSGSSGRSNVSSVLSGGRKDGVRVVRVQARASRGVDDDGVVRSRL 533
L+TKVFS GKAADALAASMAVP +FKPVW +GRPLIDGAVGDVAGVDGLERSERV YHHATYLPL LTQHLGGF+DLVALKI GLPYLNPWQLPGNGMDAFRLA+EATLRALD+P+ R T A G+SG L GVRVV+V+A+ + VD GVVRSRL
Sbjct: 135 LKTKVFSEGKAADALAASMAVPGLFKPVWSNGRPLIDGAVGDVAGVDGLERSERVLYHHATYLPLRLTQHLGGFTDLVALKINGLPYLNPWQLPGNGMDAFRLAKEATLRALDTPVKKRG--WTGSVAATKADDGTSG-------LPEAVHPGVRVVKVRAQRRQMVDSGGVVRSRL 302
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A7S3XKZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKZ4_HETAK) HSP 1 Score: 101 bits (251), Expect = 4.030e-21 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 3
Query: 3 LRTKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQHLGGFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRAL 338
LRT+ F +G A+AASM+VP +FKP +++G+P +DGA+ DVAG+ G+++ ERV YHH T LP+ + + F + LKIEGLP+L+P G + LA AT AL
Sbjct: 141 LRTQAFFSGDIVTAVAASMSVPFMFKPTFINGKPFLDGALFDVAGLAGVDKDERVLYHHCTALPVSCSG-IDAFRNSTTLKIEGLPFLDPATYSRRGAETIELAYVATKDAL 251
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A7W0TBK1_9DELT (Patatin-like phospholipase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0TBK1_9DELT) HSP 1 Score: 96.3 bits (238), Expect = 5.800e-20 Identity = 59/134 (44.03%), Postives = 81/134 (60.45%), Query Frame = 3
Query: 6 RTKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLT----QHLGGFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALDSPMVGRSDVVTSPSPAGA 395
RT V ++G ADA+ AS AVP +F PVW++GRP DG + D AG+ G+ R+ +HH + P W Q + DLV+L +E LP +NP++L G A LAR+AT RALD P+ G D+V+ AGA
Sbjct: 108 RTAVLTSGDLADAIRASCAVPAMFHPVWIAGRPYWDGGILDRAGIAGVPTG-RLLFHHISARPPWQRTTRPQVVPRRPDLVSLVLENLPRVNPFRLDA-GRRALELARDATKRALDRPLAG--DLVSVDVTAGA 237
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A7W0WRG0_9DELT (Patatin-like phospholipase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0WRG0_9DELT) HSP 1 Score: 91.3 bits (225), Expect = 5.970e-19 Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 3
Query: 6 RTKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQHLG--GFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALDSPMV 353
+T V ++G ADA+ AS AVP +F+PVW+ GRP DG + D G+ G+ +F+H A+ P W LG ++LV+L I+ LP P++L G A LAR+ATLRALD+P+V
Sbjct: 29 KTAVLASGDLADAIRASCAVPAMFQPVWIGGRPYWDGGILDRPGIAGVPSGRLLFHHIASRSP-WRFAGLGLPRRAELVSLVIDALPRSGPFKLDA-GRRALSLARDATLRALDAPIV 144
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A850BBZ6_9DELT (Patatin-like phospholipase family protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850BBZ6_9DELT) HSP 1 Score: 89.4 bits (220), Expect = 3.060e-17 Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 3
Query: 6 RTKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQ-----HLGGFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALDSPM 350
RT+V + G+ A+ AS AVP++F+P WV GRPL+DG + D G+ G+ +R+FYHH W + + +++ +L + GLP + P++L G AF AR+A ALD P+
Sbjct: 127 RTRVLTAGRLVHAICASCAVPLLFQPAWVDGRPLLDGGILDRPGITGIPEGDRLFYHHLADRSPWRRKGSPSLEIPRRANMTSLVVGGLPRVGPFRLE-QGAAAFDAARKAAREALDRPI 245
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A4U1H7W2_9DELT (Patatin n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1H7W2_9DELT) HSP 1 Score: 85.5 bits (210), Expect = 9.110e-16 Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 3
Query: 9 TKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQHLGGFS-----DLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALDSPMVGR 359
T+V G A A+ AS VP +F PVW+ GRPL+DG + D G+ G+ R+FYHH W + + + AL I LP + P++LP G AF +AR A AL P+ GR
Sbjct: 139 TRVLECGPLAPAIQASCTVPGLFHPVWLEGRPLLDGGILDRPGLAGMPEGTRLFYHHLAARSPWRRRQSPALAVPERQGMTALVIASLPRVGPFRLP-EGARAFEIARRAAREALGRPVEGR 259
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A0F6SGK1_9DELT (PNPLA domain-containing protein n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6SGK1_9DELT) HSP 1 Score: 84.0 bits (206), Expect = 2.810e-15 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 3
Query: 6 RTKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQHLGGF-----SDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALDSPMVGRSDVVTSP 380
RT+V G A A+ AS AVP++F PV V GR L+DG V D G+ G+ ERV +HH W ++ + LVAL IE LP + P++L G G+ A + AR+AT ALD + G +V++P
Sbjct: 128 RTRVIDAGDLAAAIHASCAVPLMFHPVRVDGRWLVDGGVSDRPGLRGVPERERVLFHHLASRSPWRRKNDPALEVPQRAGLVALVIEDLPRVGPYRL-GEGLRAMKAARDATRVALDRVIEG--SIVSAP 254
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A813I6K8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6K8_POLGL) HSP 1 Score: 84.0 bits (206), Expect = 6.880e-15 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 3
Query: 6 RTKVFSTGKAADALAASMAVPVIFKPVWVS-GRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQHLGGFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRAL 338
+T+V G A A+ AS+AVP F PV+ GRPL+DG + D+ G++G+ ERV YHHA+ +P T +G + + + L+I LP++NP+ L G A A+ AT L
Sbjct: 166 QTRVLREGSIAFAITASLAVPFFFAPVYFEVGRPLLDGGIRDLPGLEGVSFGERVLYHHASIVPSCFTA-IGRYPESITLRIPHLPFVNPFTL-GQAQPALTTAKLATQAGL 275
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A2D9TE07_9DELT (Patatin n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TE07_9DELT) HSP 1 Score: 77.4 bits (189), Expect = 5.910e-13 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 3
Query: 6 RTKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQ-----HLGGFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALDSPMVG 356
+T V G DA+ AS AVP +F+PVW+ GRP +DG + D G+ G+ RV +HH + W + D+ AL ++GLP ++P+ L G A+ A AT RA+D P G
Sbjct: 125 KTVVRDRGSLPDAIHASCAVPFLFQPVWLEGRPHLDGGLLDRPGLAGVTAGTRVLHHHLSSRSPWRRSTSPALRIPAREDVHALVLDGLPRVSPFDLEA-GHRAYERALAATRRAMDLPFDG 245
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Match: A0A1J5D3W5_9DELT (Patatin n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1J5D3W5_9DELT) HSP 1 Score: 71.6 bits (174), Expect = 6.580e-11 Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3
Query: 9 TKVFSTGKAADALAASMAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTQH-----LGGFSDLVALKIEGLPYLNPWQLPGNGMDAFRLAREATLRALD 341
T+V + G A+ + A+ A+P +F+PVW+ GRP++DG V D G L ERVF+HH W ++ + F+ +V + + + ++P++L NG A+ R AT LD
Sbjct: 127 TRVVNDGDLANGIRATCALPFLFQPVWLRGRPVLDGGVLDRPGHAPLRVGERVFFHHLASRSPWRRRNSPVMQIPRFNGMVTMAVGEVERVSPFKLE-NGRKAYEQVRVATREGLD 241 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8860.17883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8860.17883.1 >prot_L-elsbetiae_contig8860.17883.1 ID=prot_L-elsbetiae_contig8860.17883.1|Name=mRNA_L-elsbetiae_contig8860.17883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=160bp MAVPVIFKPVWVSGRPLIDGAVGDVAGVDGLERSERVFYHHATYLPLWLTback to top mRNA from alignment at L-elsbetiae_contig8860:5744..7450- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8860.17883.1 ID=mRNA_L-elsbetiae_contig8860.17883.1|Name=mRNA_L-elsbetiae_contig8860.17883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1707bp|location=Sequence derived from alignment at L-elsbetiae_contig8860:5744..7450- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8860:5744..7450- >mRNA_L-elsbetiae_contig8860.17883.1 ID=mRNA_L-elsbetiae_contig8860.17883.1|Name=mRNA_L-elsbetiae_contig8860.17883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=960bp|location=Sequence derived from alignment at L-elsbetiae_contig8860:5744..7450- (Laminarionema elsbetiae ELsaHSoW15)back to top |