mRNA_L-elsbetiae_contig8739.17767.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: D7FWX3_ECTSI (Axonemal 1-beta dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX3_ECTSI) HSP 1 Score: 263 bits (671), Expect = 8.210e-79 Identity = 132/139 (94.96%), Postives = 133/139 (95.68%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV-----MYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA 402 +ITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV MYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQ CLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA Sbjct: 555 EITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVVKDLEVMYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQACLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA 693
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A6H5KP60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP60_9PHAE) HSP 1 Score: 181 bits (459), Expect = 2.860e-50 Identity = 94/107 (87.85%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV-----MYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEG 306 +I+KALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV MYTNVINTAFEGITRI DAVALLEIFYTLARRDAIKQ CLKKTAYTYMLFVR + Sbjct: 20 EISKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVVKDLEVMYTNVINTAFEGITRIIDAVALLEIFYTLARRDAIKQACLKKTAYTYMLFVREAQA 126
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A835Z4V1_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V1_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.770e-45 Identity = 88/139 (63.31%), Postives = 102/139 (73.38%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSF----KDV-VMYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA 402 ++ KAL GI +F A +LR LDY VLDV RWHDD+ +F KD+ VMY+NVIN AF+G+ R+ DAVALLE+FYTLARR IKQTCLKKTA Y+ F YV GLR EFDE RR PPL PNEP FAGSA+W SLA Sbjct: 382 ELGKALEGIAAAFGAHAARLRALDYDVLDVKIGRWHDDFATFTTLAKDLEVMYSNVINAAFDGVARVADAVALLEMFYTLARRPHIKQTCLKKTADVYVQFTAYVGGLRREFDERRRAPPLGPNEPQFAGSALWGASLA 520
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A7S3JQB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQB6_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.940e-40 Identity = 72/139 (51.80%), Postives = 98/139 (70.50%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV-----MYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA 402 +ITKAL+ I+ F+ ++KL L+Y + DV TS WH+D+N+FK V +Y NV+N AFE +T++++A++LLEIF LA+RDA+ + KKT Y LF + VE LR FDE RR PPLR NEP FAG+A+WA SLA Sbjct: 113 EITKALVDIRSQFDGYVNKLHALEYNIFDVKTSLWHEDFNTFKHAVKDLEVVYANVLNAAFENVTQVSEAISLLEIFNELAKRDAVIRCVEKKTLDAYALFTKTVESLRQVFDEQRREPPLRANEPKFAGAALWASSLA 251
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: F0YHG5_AURAN (DHC_N1 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG5_AURAN) HSP 1 Score: 136 bits (343), Expect = 1.290e-38 Identity = 69/106 (65.09%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV-----MYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVE 303 +ITKAL+ IQD FE QID+LRNLDY +LDV TS WHDDYN FK+ V MYTNV+NTAFEG+TR+++AVA+LEIFY+LA+RDAI++ KKT YMLF+ VE Sbjct: 48 EITKALIEIQDQFEQQIDRLRNLDYEILDVKTSHWHDDYNVFKNSVKDLEVMYTNVMNTAFEGVTRVSEAVAVLEIFYSLAKRDAIQRCVEKKTVDMYMLFIHTVE 153
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A7S4EBE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBE8_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.170e-37 Identity = 71/139 (51.08%), Postives = 102/139 (73.38%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV-----MYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA 402 ++TK+L+ IQ+ F+ QI +L +L Y +LDV S WH+D+N FK+ V MYTN+I+ +FEG+ + +AV +L+IF +LA+RDAIK+ KK + Y+LF+ VE +R EFDENRR PPLR +EP +AGSA+WA +LA Sbjct: 416 EVTKSLVAIQNQFDNQISRLCDLKYQILDVRLSHWHEDFNIFKNSVKDLEVMYTNMISASFEGVNCMAEAVGVLQIFQSLAKRDAIKRCVEKKNSDLYLLFIHDVEEVRREFDENRRAPPLRNDEPRWAGSALWATALA 554
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A8J2WYK5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYK5_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.560e-37 Identity = 71/139 (51.08%), Postives = 102/139 (73.38%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVV-----MYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA 402 ++TK+L+ IQ+ F+ QI +L +L Y +LDV S WH+D+N FK+ V MYTN+I+ +FEG+ + +AV +L+IF +LA+RDAIK+ KK + Y+LF+ VE +R EFDENRR PPLR +EP +AGSA+WA +LA Sbjct: 442 EVTKSLVAIQNQFDNQISRLCDLKYQILDVRLSHWHEDFNIFKNSVKDLEVMYTNMISASFEGVNCMAEAVGVLQIFQSLAKRDAIKRCVEKKNSDLYLLFIHDVEEVRREFDENRRAPPLRNDEPRWAGSALWATALA 580
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A2R5GWD4_9STRA (Dynein heavy chain 2, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWD4_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.370e-32 Identity = 69/138 (50.00%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKD-----VVMYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSL 399 +I K LL I+D F ID LR L+Y VLDV +RWH+DYN K+ VM NVIN+AFE +T + V LLE F LA+R+AI + KKTA + LF R ++ +R EFD+ R PPLR +EP FAG+A+WA L Sbjct: 572 EIAKQLLEIEDQFAKHIDHLRGLEYDVLDVKATRWHEDYNHLKNGMKDLEVMMQNVINSAFESVTTVAAGVDLLEAFSELAKREAITRCVTKKTAEVFQLFGRELDQIRLEFDQFRASPPLRADEPRFAGAALWARGL 709
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A482RZ06_9ARCH (DHC_N1 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ06_9ARCH) HSP 1 Score: 129 bits (323), Expect = 5.630e-32 Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFK-DV----VMYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPPFAGSAVWAHSLA 402 +I + GIQ+SFE I+ LR LDY VLDV S+WHDDYN FK DV VM+TNV+N AFE +++ V L+E FY LA+RD I + +K A +F + V+ +R EF+ R PPLR +EP +AGSA+WAHSL+ Sbjct: 509 EIIDGINGIQESFENHINTLRKLDYDVLDVKISKWHDDYNHFKNDVKDLEVMFTNVMNAAFEVNATVSEGVLLVETFYRLAKRDVIIRCVERKAAEINHMFDKEVQTIRSEFELARLNPPLRLHEPQYAGSALWAHSLS 647
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Match: A0A8J6CA31_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA31_DIALT) HSP 1 Score: 125 bits (313), Expect = 1.340e-30 Identity = 63/138 (45.65%), Postives = 93/138 (67.39%), Query Frame = 1 Query: 1 QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKD-----VVMYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQTCLKKTAYTYMLFVRYVEGLRHEFDENRRRPPLRPNEPP-FAGSAVWAHS 396 ++ K+L IQ +FE + LR LDY+VLDV +RWHDD+NSFK+ VM NVINTAF+GI+ + V LLE F ++A RDAI++ +KTA ++LF+ + ++ +FD N++ PP+ E P +AGSA+WA + Sbjct: 497 EVAKSLADIQGAFEKMMGSLRTLDYSVLDVKATRWHDDHNSFKNGVKDLEVMLMNVINTAFDGISTVIAGVELLEAFASIATRDAIRRAVERKTAELHLLFLADINAVKRDFDANKKNPPMMNREHPRYAGSAMWARA 634 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8739.17767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8739.17767.1 >prot_L-elsbetiae_contig8739.17767.1 ID=prot_L-elsbetiae_contig8739.17767.1|Name=mRNA_L-elsbetiae_contig8739.17767.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp QITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVVMYTNback to top mRNA from alignment at L-elsbetiae_contig8739:4539..5852+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8739.17767.1 ID=mRNA_L-elsbetiae_contig8739.17767.1|Name=mRNA_L-elsbetiae_contig8739.17767.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1314bp|location=Sequence derived from alignment at L-elsbetiae_contig8739:4539..5852+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8739:4539..5852+ >mRNA_L-elsbetiae_contig8739.17767.1 ID=mRNA_L-elsbetiae_contig8739.17767.1|Name=mRNA_L-elsbetiae_contig8739.17767.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig8739:4539..5852+ (Laminarionema elsbetiae ELsaHSoW15)back to top |