mRNA_L-elsbetiae_contig8715.17741.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A6H5JTN0_9PHAE (GMC_oxred_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN0_9PHAE) HSP 1 Score: 207 bits (527), Expect = 2.080e-55 Identity = 123/194 (63.40%), Postives = 138/194 (71.13%), Query Frame = 3 Query: 3 AGVYSAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVATRLGKETDASSIRRGESSPLKRRIRTFGKAVVAAMSREPSCGSDI----------------GGCGGKPDREEGGRGS-----RSGQGHAETEAWGVLPQSPLRAKA--KAAAGMGDDFGVELGDLSW 515 AG+YSAHQMG+CRLSANPEDGPLRE+GE+WECDGLFVADASVFPT+LGINPMITVEAVAYM+A+QVATRLGK+++ R ESSPLKRRI+T GKA+VAA+SRE + SD GG K EEGGRGS R G A E VLPQS L A AAAGMGDDFGVE+ DL W Sbjct: 194 AGLYSAHQMGSCRLSANPEDGPLRESGESWECDGLFVADASVFPTSLGINPMITVEAVAYMIANQVATRLGKDSENWKPRE-ESSPLKRRIKTLGKAMVAAISRESNSTSDADNAGSSLTALRRSNSRGGSNKKLVPEEGGRGSDQTIIRVPGGEAAAERC-VLPQSTLAVSAGGDAAAGMGDDFGVEVSDLYW 385
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: D7G5T1_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T1_ECTSI) HSP 1 Score: 216 bits (551), Expect = 3.030e-54 Identity = 128/194 (65.98%), Postives = 141/194 (72.68%), Query Frame = 3 Query: 3 AGVYSAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVATRLGKETDASSIRRGESSPLKRRIRTFGKAVVAAMSREPSCGSDI----------------GGCGGKPDREEGGRGS-----RSGQGHAETEAWGVLPQSPLRAKA--KAAAGMGDDFGVELGDLSW 515 AG+YSAHQMG+CRLSANPEDGPLRE+GE+WECDGLFVADASVFPT+LGINPMITVEAVAYM+ADQVATRLGK+++ S R GESSPLKRRI+TFGKA+VAA+SRE S SD GG K EEGGRGS R G A E VLPQS L A AAAGMGDDFGVE+ DL W Sbjct: 867 AGLYSAHQMGSCRLSANPEDGPLRESGESWECDGLFVADASVFPTSLGINPMITVEAVAYMIADQVATRLGKDSEDSKPR-GESSPLKRRIKTFGKAMVAAISRESSSTSDADNAGSSLTALRRSNSRGGSNRKLVPEEGGRGSDQTIIRVPGGAAAAERC-VLPQSTLAVSAGGDAAAGMGDDFGVEVTDLYW 1058
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A484KZN2_9ASTE (GMC_oxred_C domain-containing protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KZN2_9ASTE) HSP 1 Score: 92.4 bits (228), Expect = 2.280e-17 Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 9 VYSAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVATRLG 215 + SAHQMG+CR+ +P + TGE+WE +GLFVAD+SVFPTALG+NPM+TV+A+AY A+ V LG Sbjct: 146 IGSAHQMGSCRMGVDPGSSAVDPTGESWEAEGLFVADSSVFPTALGVNPMLTVQAIAYCTANHVLQALG 214
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A2Z7BB63_9LAMI (Long-chain-alcohol oxidase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BB63_9LAMI) HSP 1 Score: 97.1 bits (240), Expect = 6.920e-17 Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 3 Query: 9 VYSAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVATRLGKE 221 + SAHQMG+CR+ +P+D +R GE WE GLFVAD+SVFPTALG+NPM+T++A+AY A V LGKE Sbjct: 583 MCSAHQMGSCRMGVHPKDSAVRPNGETWEVKGLFVADSSVFPTALGVNPMVTIQAIAYCTAQSVLEVLGKE 653
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A0S3T931_PHAAN (GMC_oxred_C domain-containing protein n=1 Tax=Vigna angularis var. angularis TaxID=157739 RepID=A0A0S3T931_PHAAN) HSP 1 Score: 89.7 bits (221), Expect = 7.960e-17 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 3 Query: 15 SAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQV 200 SAHQMG+CR+ +NP+ + ETGE WE +GL+VAD SVFPTALG+NPM+ V+A+AY V V Sbjct: 108 SAHQMGSCRMGSNPKQSVVNETGETWEMEGLYVADTSVFPTALGVNPMVIVQAIAYNVPQSV 169
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A1R3KL90_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KL90_9ROSI) HSP 1 Score: 95.1 bits (235), Expect = 1.830e-16 Identity = 40/69 (57.97%), Postives = 54/69 (78.26%), Query Frame = 3 Query: 15 SAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVATRLGKE 221 SAHQMG+CR+ AN E+ + E GE WE GLFV DASVFPTA+G+NPMIT+E+++Y ++ ++A L KE Sbjct: 472 SAHQMGSCRMGANEEESVIDENGETWEAQGLFVCDASVFPTAIGVNPMITIESISYCISKKIAELLNKE 540
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A392P9E5_9FABA (Long-chain-alcohol oxidase FAO4A-like n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392P9E5_9FABA) HSP 1 Score: 90.1 bits (222), Expect = 2.420e-16 Identity = 36/64 (56.25%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 9 VYSAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQV 200 V SAHQMG+CR+ NP++ + + GE WE +GL++AD+SVFPTALG+NPM+T++A+AY A V Sbjct: 169 VCSAHQMGSCRMGTNPKESVVNQMGETWEVEGLYLADSSVFPTALGVNPMVTIQAIAYCTAQHV 232
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A2K3PH26_TRIPR (Long-chain-alcohol oxidase FAO1-like protein n=4 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PH26_TRIPR) HSP 1 Score: 87.0 bits (214), Expect = 2.460e-16 Identity = 35/68 (51.47%), Postives = 53/68 (77.94%), Query Frame = 3 Query: 15 SAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVATRLGK 218 SAHQMG+CR+ N ++G + E GE+WE +GLFV DAS+ PTA+G+NPMIT++++AY ++ ++ L K Sbjct: 66 SAHQMGSCRMGMNQKEGAVDENGESWEAEGLFVCDASLLPTAVGVNPMITIQSIAYCISSRIVDFLRK 133
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: A0A2K2AZ94_POPTR (Long-chain-alcohol oxidase n=5 Tax=Saliceae TaxID=238069 RepID=A0A2K2AZ94_POPTR) HSP 1 Score: 95.5 bits (236), Expect = 2.720e-16 Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 3 Query: 9 VYSAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVATRLGKE 221 + SAHQMG+CR+ NP++ + + GEAWE +GLFVAD SVFPTALG+NPM+TV+A+AY A V L ++ Sbjct: 737 ICSAHQMGSCRMGVNPKESAVNQMGEAWEVEGLFVADTSVFPTALGVNPMVTVQAIAYCTAQSVVQLLSRK 807
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Match: J3N3D3_ORYBR (GMC_oxred_C domain-containing protein n=3 Tax=Oryza brachyantha TaxID=4533 RepID=J3N3D3_ORYBR) HSP 1 Score: 84.7 bits (208), Expect = 2.970e-16 Identity = 33/63 (52.38%), Postives = 51/63 (80.95%), Query Frame = 3 Query: 15 SAHQMGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVAYMVADQVA 203 SAHQMG+CR++A+P DG + GE+WE +GL+V D S+ PTA+G+NPMIT++++AY ++ +A Sbjct: 13 SAHQMGSCRMAASPRDGVVDGAGESWEAEGLYVCDGSLLPTAVGVNPMITIQSIAYCLSKDIA 75 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8715.17741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8715.17741.1 >prot_L-elsbetiae_contig8715.17741.1 ID=prot_L-elsbetiae_contig8715.17741.1|Name=mRNA_L-elsbetiae_contig8715.17741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp MGTCRLSANPEDGPLRETGEAWECDGLFVADASVFPTALGINPMITVEAVback to top mRNA from alignment at L-elsbetiae_contig8715:1875..8097- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8715.17741.1 ID=mRNA_L-elsbetiae_contig8715.17741.1|Name=mRNA_L-elsbetiae_contig8715.17741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6223bp|location=Sequence derived from alignment at L-elsbetiae_contig8715:1875..8097- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8715:1875..8097- >mRNA_L-elsbetiae_contig8715.17741.1 ID=mRNA_L-elsbetiae_contig8715.17741.1|Name=mRNA_L-elsbetiae_contig8715.17741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=984bp|location=Sequence derived from alignment at L-elsbetiae_contig8715:1875..8097- (Laminarionema elsbetiae ELsaHSoW15)back to top |