prot_L-elsbetiae_contig8625.17659.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8625.17659.1
Unique Nameprot_L-elsbetiae_contig8625.17659.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length181
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8625.17659.1 vs. uniprot
Match: D7G367_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G367_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 1.440e-78
Identity = 124/175 (70.86%), Postives = 147/175 (84.00%), Query Frame = 0 
Query:    1 MFVQLKPGTNKRLRLIYTMLSTTAFSLQLVCVLCSTLTYTSVASRSEAIAVSAISYLSSELQWEFYVIRGSFVYGLFAFLGALSVRGWLTFSADGDRGSAWAMTLILASSALFLLNFIHHTHNPLTLCLGGMTKTVLRLTLGNMYPTKKRFFRHAIWVAMIVGAVKLFKLGPNEG 175
            MF+Q KP  NKRL L+YT+LST+AFSLQLVCVLCSTLTYTS+ASR EA+A+SAISYLS ++QWEF+VIRGSFVYGLF+FL AL+ RGWLTF  + +RG AW +  +LASSA+FLLNFIH+T N LTLCLGGMTK ++ LTL NMY TKKRFFRH +    I GAVKL KLGP++G
Sbjct:  187 MFLQPKPDANKRLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAMAISAISYLSEQMQWEFFVIRGSFVYGLFSFLAALACRGWLTFYEEKERGPAWVIMAVLASSAIFLLNFIHYTQNSLTLCLGGMTKALISLTLRNMYDTKKRFFRHVLAAFGIWGAVKLLKLGPSKG 361
[Close]
BLAST of mRNA_L-elsbetiae_contig8625.17659.1 vs. uniprot
Match: A0A6H5JKS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS2_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 5.680e-76
Identity = 122/175 (69.71%), Postives = 142/175 (81.14%), Query Frame = 0 
Query:    1 MFVQLKPGTNKRLRLIYTMLSTTAFSLQLVCVLCSTLTYTSVASRSEAIAVSAISYLSSELQWEFYVIRGSFVYGLFAFLGALSVRGWLTFSADGDRGSAWAMTLILASSALFLLNFIHHTHNPLTLCLGGMTKTVLRLTLGNMYPTKKRFFRHAIWVAMIVGAVKLFKLGPNEG 175
            MF Q K   N+RL L+YT+LST+AFSLQLVCVLCSTLTYTS+ASR EAIA+SAISYLS ++QWEF+VIRGSFVYGLF+FL AL  RGWLTF  + +RG AW +  +LASSA+FLLNFIH+THN LTLCLGGMTK ++ LTL NMY TKKRF RH +    I GAVKL KL P+ G
Sbjct:  142 MFFQPKADANRRLHLLYTLLSTSAFSLQLVCVLCSTLTYTSIASRPEAIAISAISYLSEQMQWEFFVIRGSFVYGLFSFLAALVCRGWLTFYEEKERGPAWVIMAVLASSAIFLLNFIHYTHNSLTLCLGGMTKALISLTLRNMYATKKRFIRHVLAAFGIWGAVKLLKLEPSAG 316
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8625.17659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G367_ECTSI1.440e-7870.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKS2_9PHAE5.680e-7669.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012446Calcium release-activated calcium channel proteinPFAMPF07856Orai-1coord: 9..123
e-value: 8.3E-6
score: 25.6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..168
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..39
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 151..168
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 99..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8625contigL-elsbetiae_contig8625:5225..7485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8625.17659.1mRNA_L-elsbetiae_contig8625.17659.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8625 2615..8517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8625.17659.1 ID=prot_L-elsbetiae_contig8625.17659.1|Name=mRNA_L-elsbetiae_contig8625.17659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MFVQLKPGTNKRLRLIYTMLSTTAFSLQLVCVLCSTLTYTSVASRSEAIA
VSAISYLSSELQWEFYVIRGSFVYGLFAFLGALSVRGWLTFSADGDRGSA
WAMTLILASSALFLLNFIHHTHNPLTLCLGGMTKTVLRLTLGNMYPTKKR
FFRHAIWVAMIVGAVKLFKLGPNEGVAAAK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012446CRAC_channel