mRNA_L-elsbetiae_contig8046.17034.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8046.17034.1
Unique NamemRNA_L-elsbetiae_contig8046.17034.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: D8LEJ6_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ6_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 2.320e-146
Identity = 229/272 (84.19%), Postives = 237/272 (87.13%), Query Frame = 1
Query:    1 NMDAGPDIAQQGMQFPMDVPPTLVKFDPPIFAGLEPSSEANSNRIN-----NNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 801
            N+  GPD+ QQGMQFPM+VP TLVKFDPPIFAGLEPSS+ N+   N      N G        XXXX    G  GK SQLDDMVNSMLPPREWTEETGTWMQYVSK+PATRLAVI LQEQLD KLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEME+QIA L E+KK LELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK
Sbjct:    4 NVGRGPDMTQQGMQFPMEVPQTLVKFDPPIFAGLEPSSDPNNGGDNALLMGGNGGXXXX----XXXXMGGKGQQGKASQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVIALQEQLDNKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAALGEDKKGLELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 271          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A835YSJ6_9STRA (p28 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ6_9STRA)

HSP 1 Score: 322 bits (824), Expect = 3.230e-107
Identity = 170/254 (66.93%), Postives = 202/254 (79.53%), Query Frame = 1
Query:   40 QFPMDVPPTLVKFDPPIFAGLEPSSEANSNRINNNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 801
            Q P  VP +LV++D PIF G+EP++    N   ++S                       +QL+DM+NSMLPPREWTEETGTWMQ VSK+PATRL V+TLQE LDKKL ERQA +TGICPVR+DLY+QAFDELIR VTLDGPERGLL LRVRDEIRMTIDAY+TLYDSSV FG+KKQLQAEQGM EME +IA+LEE+K+ LE    ELRN+VE++EK E+E+R+V+DK+R+EEV+FLKYQGQHLDSFLKQIGGSK
Sbjct:    6 QHPNAVPDSLVRYDQPIFGGVEPATGHGGNGTASSS----------------------IAQLEDMMNSMLPPREWTEETGTWMQCVSKNPATRLDVVTLQECLDKKLGERQARDTGICPVRDDLYSQAFDELIRQVTLDGPERGLLLLRVRDEIRMTIDAYRTLYDSSVVFGIKKQLQAEQGMDEMEAEIAQLEESKQALEYRAQELRNRVELMEKREAEQRSVEDKRRREEVEFLKYQGQHLDSFLKQIGGSK 237          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A7S2UXS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS2_9STRA)

HSP 1 Score: 318 bits (814), Expect = 1.780e-105
Identity = 168/254 (66.14%), Postives = 195/254 (76.77%), Query Frame = 1
Query:   40 QFPMDVPPTLVKFDPPIFAGLEPSSEANSNRINNNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 801
            Q P + P +LVKFD P+F GL+PSS   +  I N                    +    SQ+DDM+NSM+PPREWT+ +GTWMQY+SK+ ATRL VITLQEQLDK+L+ERQA ET ICPVREDLY+Q FDELIRHVTLD PERGLL LRVRDEIRMTIDAYKTLYDSSVTFG+KKQLQAE GM++ME QIA LE  KKE E    ELRNK+EVIEK E ERR +++KKRKEE+DFLKYQGQHLD+ +K +GGSK
Sbjct:   16 QDPANPPESLVKFDEPLFVGLQPSSHTKAAAIAN-----------------IKADGANASQIDDMMNSMIPPREWTDVSGTWMQYISKESATRLDVITLQEQLDKRLVERQARETDICPVREDLYSQCFDELIRHVTLDSPERGLLLLRVRDEIRMTIDAYKTLYDSSVTFGIKKQLQAEMGMSDMEKQIAILELTKKERENKTLELRNKLEVIEKREVERRGLEEKKRKEEIDFLKYQGQHLDTSIKHVGGSK 252          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA)

HSP 1 Score: 313 bits (803), Expect = 5.130e-104
Identity = 168/248 (67.74%), Postives = 191/248 (77.02%), Query Frame = 1
Query:   58 PPTLVKFDPPIFAGLEPSSEANSNRINNNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 801
            P  LVK+DP +F G +P++  N  +    +   P                   SQLDDMVNSMLPPREWT+E+GTWMQYVSKD ATRL VI LQE LDK+LLERQA ETGICPVREDLY+Q FDELIR VTLDGPERGLL LRVRDEI+MTIDAYK LY+SSVTFGV+KQLQAEQGMAE+E +I  LE  KKELE  V ELRNKVEV EK  +ER+ ++DKKRKEE+DFLKYQGQHLDSFL+Q+GG K
Sbjct:   12 PDALVKYDPALFVGFDPAT--NDVKATRKADATP-------------------SQLDDMVNSMLPPREWTQESGTWMQYVSKDSATRLDVINLQEMLDKRLLERQARETGICPVREDLYSQCFDELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHLDSFLRQLGGGK 238          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A6V1KR45_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KR45_HETAK)

HSP 1 Score: 295 bits (756), Expect = 1.000e-96
Identity = 160/266 (60.15%), Postives = 195/266 (73.31%), Query Frame = 1
Query:    4 MDAGPDIAQQGMQFPMDVPPTLVKFDPPIFAGLEPSSEANSNRINNNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 801
            MD G D    G Q P + P +L+KFD PIF GL+PS++    ++       P+G                 +QLDDM+NSMLPPREWTEE+GTWMQY+SK+PATRL VITLQE LDK L+ERQA ETGICPVREDLY+QAFDELIRHVTLD PERGLL LR RDE+RMT+DAYKTLY SSVTFGVKKQLQAE GM+EM +QI  L E ++  E   +ELR +++  EK  +ER+ ++ + R+ E+DFLKYQGQHLD FLK +GG+K
Sbjct:    2 MDNGYDD-DNGGQGPANPPESLLKFDEPIFVGLQPSNQNEGFKMPE----APKG-------------ELTNAQLDDMLNSMLPPREWTEESGTWMQYISKEPATRLDVITLQEHLDKCLVERQARETGICPVREDLYSQAFDELIRHVTLDSPERGLLLLRARDEVRMTVDAYKTLYGSSVTFGVKKQLQAELGMSEMANQIEALGEARRARERRCAELRARLDAAEKRAAERQQLEGQARRAEIDFLKYQGQHLDGFLKHVGGTK 249          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN)

HSP 1 Score: 283 bits (724), Expect = 1.010e-92
Identity = 141/187 (75.40%), Postives = 165/187 (88.24%), Query Frame = 1
Query:  232 MVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIG 792
            MVNSMLPPREWT+ +GTWMQYVSK  ATR+ VI+LQE LDK+LL+RQA + GICPVREDLY+Q +DELIR +TLDGPERGLL LRVRDEIRMTIDAYK LYDSSVTFG++KQLQAEQGM+E+E +IA LE   K+LE  V ELRN VEVIEK E+E +AV+DKKRK+E+DFLKYQGQHLD+FL+Q+G
Sbjct:    1 MVNSMLPPREWTQTSGTWMQYVSKKTATRMDVISLQEDLDKRLLDRQARDAGICPVREDLYSQCYDELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGVEVIEKRENEHKAVEDKKRKDEIDFLKYQGQHLDAFLRQLG 187          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.110e-92
Identity = 152/245 (62.04%), Postives = 177/245 (72.24%), Query Frame = 1
Query:   58 PPTLVKFDPPIFAGLEPSSEANSNRINNNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIG 792
            P +L+K D P+F G + +  A         G    G                  QL +MVNSMLPPREWTE TGTWMQYVSK PA+R  VI +QE LD KLLERQA + GICPVREDLY Q FDELIR +TLDGPERGLL LRVRDE+RMT+DAYK LYDSSVTFGV+KQLQAEQGMAE++ ++A LE   K+LE  V ELRN VEV+EK  SE +A+ DKKRK+E+DFLKYQGQHLD FL+Q+G
Sbjct:   10 PASLLKHDEPLFVGFDGADSAAK------PGTAAGG------------------QLGEMVNSMLPPREWTEPTGTWMQYVSKAPASRTDVIAMQEALDAKLLERQARDAGICPVREDLYAQCFDELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGVEVVEKRASEHKAMADKKRKDEIDFLKYQGQHLDQFLRQLG 230          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA)

HSP 1 Score: 270 bits (690), Expect = 8.070e-87
Identity = 138/192 (71.88%), Postives = 163/192 (84.90%), Query Frame = 1
Query:  223 LDDMVNSMLPPREWTEE-TGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGG 795
            +++++NS+LPPR W +E    WMQYVSK PA+RL VI LQE LD+KL+ERQA E GICPVREDLY+Q FDELIR VT++ PERGLL LRVRDEIRMTIDAYKTLY+SSVTFGV+KQLQAEQG+AEME +I  L E KK+L+  V ELRNKVEVIEK  +ERR +++KKRKEE+DFLKYQGQHLD FLK +GG
Sbjct:   49 IEEVLNSILPPRMWADEGAADWMQYVSKTPASRLDVINLQEALDEKLMERQAREMGICPVREDLYSQCFDELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKVEVIEKRATERRQLEEKKRKEEIDFLKYQGQHLDQFLKTLGG 240          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A6G0XVN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVN6_9STRA)

HSP 1 Score: 267 bits (682), Expect = 9.700e-86
Identity = 140/247 (56.68%), Postives = 179/247 (72.47%), Query Frame = 1
Query:   58 PPTLVKFDPPIFAGLEPSSEANSNRINNNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGS 798
            P +LVKFD PIF G    +     + +  S  +P                   S+++D++N+MLP + W E+TG WM+YVS +P+TR  VI LQEQ+D KL++RQA E+GICPVRED+Y+Q FDELIR VT++ PERGLL LR+RDEIRMT DAYKTLYDSS+TFGV+KQLQAEQGM  +ED+I  L E K+E E  V EL NK+E+IEK  +ERRA+ +K+ KEE++FLKYQGQHLD+FLK  GGS
Sbjct:    7 PESLVKFDAPIFTG---ENHDGGKKTHPTSKIDP------------------VSRIEDVLNAMLPAQSWKEDTGFWMRYVSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYSQCFDELIRQVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKILLLTEEKREYENKVLELTNKLEIIEKRSNERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGS 232          
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Match: A0A024UH61_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UH61_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.190e-84
Identity = 141/247 (57.09%), Postives = 176/247 (71.26%), Query Frame = 1
Query:   58 PPTLVKFDPPIFAGLEPSSEANSNRINNNSGNEPRGGGXXXXXXXXXGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKDPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEDQIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGS 798
            P +LVK+D PIF G             N  G + +                  S+++D++N+MLPP+ W EETG WM+Y S +P+TR  VI LQEQ+D KL++RQA E+GIC VRED+Y Q FDELIR VT++ PERGLL LR+RDEIRMT DAYKTLYDSS+TFGV+KQLQAEQGM  +ED+IA L E K+E E  V EL NK+EVIEK  SERRA+ +K+ KEE++FLKYQGQHLD+FLK  GG+
Sbjct:    7 PESLVKYDAPIFTGEH-----------NEGGKKAKPAPGTKIDP--------VSRIEDVLNAMLPPQTWKEETGHWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICNVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGA 234          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8046.17034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ6_ECTSI2.320e-14684.19p28, 28 kDa light chain of axonemal inner dynein a... [more]
A0A835YSJ6_9STRA3.230e-10766.93p28 protein n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2UXS2_9STRA1.780e-10566.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CCB2_9STRA5.130e-10467.74Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V1KR45_HETAK1.000e-9660.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y5N0_AURAN1.010e-9275.40Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2S909_9STRA2.110e-9262.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1GAQ8_9STRA8.070e-8771.88Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6G0XVN6_9STRA9.700e-8656.68Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UH61_9STRA1.190e-8457.09Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8046contigL-elsbetiae_contig8046:692..4767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score419.1
Seed ortholog evalue1.6e-114
Seed eggNOG ortholog2880.D8LEJ6
KEGG koko:K10410
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG4001@1,KOG4001@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Ec32 ortholog descriptionAxonemal dynein light chain
Ec32 orthologEc-21_004400.1
Exons5
Model size1007
Cds size801
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.4245408-UTR-L-elsbetiae_contig8046:691..8941622816889.4245408-UTR-L-elsbetiae_contig8046:691..894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8046 692..894 -
1691683889.609372-UTR-L-elsbetiae_contig8046:691..8941691683889.609372-UTR-L-elsbetiae_contig8046:691..894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8046 692..894 -
1622816889.4999382-UTR-L-elsbetiae_contig8046:4764..47671622816889.4999382-UTR-L-elsbetiae_contig8046:4764..4767Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8046 4765..4767 -
1691683889.6629963-UTR-L-elsbetiae_contig8046:4764..47671691683889.6629963-UTR-L-elsbetiae_contig8046:4764..4767Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8046 4765..4767 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.4349976-CDS-L-elsbetiae_contig8046:894..10291622816889.4349976-CDS-L-elsbetiae_contig8046:894..1029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 895..1029 -
1691683889.6216075-CDS-L-elsbetiae_contig8046:894..10291691683889.6216075-CDS-L-elsbetiae_contig8046:894..1029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 895..1029 -
1622816889.447507-CDS-L-elsbetiae_contig8046:1672..17351622816889.447507-CDS-L-elsbetiae_contig8046:1672..1735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 1673..1735 -
1691683889.629884-CDS-L-elsbetiae_contig8046:1672..17351691683889.629884-CDS-L-elsbetiae_contig8046:1672..1735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 1673..1735 -
1622816889.4602985-CDS-L-elsbetiae_contig8046:2121..23001622816889.4602985-CDS-L-elsbetiae_contig8046:2121..2300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 2122..2300 -
1691683889.6380637-CDS-L-elsbetiae_contig8046:2121..23001691683889.6380637-CDS-L-elsbetiae_contig8046:2121..2300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 2122..2300 -
1622816889.474789-CDS-L-elsbetiae_contig8046:2853..29411622816889.474789-CDS-L-elsbetiae_contig8046:2853..2941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 2854..2941 -
1691683889.6462548-CDS-L-elsbetiae_contig8046:2853..29411691683889.6462548-CDS-L-elsbetiae_contig8046:2853..2941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 2854..2941 -
1622816889.488418-CDS-L-elsbetiae_contig8046:4428..47641622816889.488418-CDS-L-elsbetiae_contig8046:4428..4764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 4429..4764 -
1691683889.6547801-CDS-L-elsbetiae_contig8046:4428..47641691683889.6547801-CDS-L-elsbetiae_contig8046:4428..4764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8046 4429..4764 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8046.17034.1prot_L-elsbetiae_contig8046.17034.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8046 895..4764 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8046.17034.1

>prot_L-elsbetiae_contig8046.17034.1 ID=prot_L-elsbetiae_contig8046.17034.1|Name=mRNA_L-elsbetiae_contig8046.17034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp
MDAGPDIAQQGMQFPMDVPPTLVKFDPPIFAGLEPSSEANSNRINNNSGN
EPRGGGRGGGGKGNNGNHGKTSQLDDMVNSMLPPREWTEETGTWMQYVSK
DPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTL
DGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMED
QIARLEENKKELELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKY
QGQHLDSFLKQIGGSK*
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mRNA from alignment at L-elsbetiae_contig8046:692..4767-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8046.17034.1 ID=mRNA_L-elsbetiae_contig8046.17034.1|Name=mRNA_L-elsbetiae_contig8046.17034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4076bp|location=Sequence derived from alignment at L-elsbetiae_contig8046:692..4767- (Laminarionema elsbetiae ELsaHSoW15)
AACATGGACGCAGGGCCGGACATCGCCCAGCAGGGGATGCAATTCCCTAT GGACGTGCCGCCAACGCTGGTAAAGTTCGATCCTCCGATCTTTGCCGGTC TTGAGCCTTCGTCCGAGGCCAACAGTAATCGCATCAACAACAATAGCGGC AATGAACCGCGGGGAGGGGGTCGAGGGGGTGGCGGCAAGGGGAATAACGG GAATCACGGAAAGACGTCTCAGCTGGACGATATGGTCAACTCGATGCTGC CACCGCGAGAGTGGACGGAAGAGACGGGGACGTGGATGCAGTATGTCAGC AAAGATCCCGCAACGAGGTTGGCGGTCATCACGCTGCAGGTATCCTTACA TATGTCAGTGAAGAGGAGGTTGCACGCGACCATGGTGGCCCAGTTATACT TGTTGTGGACTGCTGTTGTCGGCGCTCAACACATGAAAAGGTGTCACACG TAGCCGTCATGCCAAAGTTTGCGGCCCATAATGGAACATATCTATAGACT AGACTACGGTTTATGCCAGCACACTTGCCTCGCACTACACGAGAGTCGCC GTGGGGTAGAAAGGGCTAGCTCTCCTCCGGCTTGGGTGGTGTACCGTTGT TTATTTTGTTGTACATAATACGTAAGTACTCTATCTATTCGATCGCCCTC TGACATCGTCGACCTCACTGAAATACCTGGTTCTACAAGAAGTAGGGGGT GATCCCCAAGGTACATGACCATGTGCGCAATTGGGAATTCCAGAAAAGTA CAAACACAGTTAAAGTTTTCAAGGTAAATTATGAAATGACAAGGAGAATA TGCGATATAGCTGCGAAGAACATCGTTTGATTGTAGCATTCCGCGGTGGG TGTTCTTTCTTGACTGCACGTTCGGCAGAGGGCGACTACCCACCAGCAAG CGTAGAAAGAAGCGAAGGGTGCACACACGTGTTGCTGCGGTAGGAAAAGT AACAAAAATTCGGCACAAAAAGATGACGAACGTACCCTCACGATTCAACG GAACCTCCGATTTTCTTTTTCCCGGCCCCATTTCAGTCATGTCCTTCTCG TCACACAGAATTCCCTTTGCCACACGCCACAAGCAGGGCACCTCCAGACA GACATAATCTATGTCCGCGAGCACTTAAAATATCGTGGTTTGGCTTTGAA CTGAGTAAACGTTGCGCTGTCGCAACTGAAAACCTGACGGTTTGCCGCTG CATCACCTAATTGTTTTGCTCACGGGAGGCCGTTACAACTTTCAGCTCAA AGTCATCCGTCCACCCGCAAAGTTGCCCAAATCGTCTGAAACTTTGCCAG GGTAGATACAGATAGACAAGCACACAAGAGAAAGCGCCTAGGCTCAAATT GGTATCGCCACTACGGCGGTAGCCTGCAAAAGGCGTCTAAAATCGACCTA AATCAACTCTGAACGCCAGTCGTGCAGCGGGGTAACCAAAGAGCGGCAAG CAAGACCATATGTCTATCTCCAACAGCATCATGAATAATGTGGCATCGAC CAGGCCCAGCCAGCCCTAGGCCAAAGTTGTACTCGTACACCCGTAAAGTT GCCCAAATCGCCCCGATACGTGGAGAGAAGACGTATGTGTTGATGTATTC GCCTAGCTACGTAGAATTTGGGATCGACATTACAGCCGGATATGTTTGAA CATTTAGGTCATCTCCTATTTATGAGTTGTGGGGATCCGTAGATTGGAAA AAAAATGTCCCGAAAAAATAGATACATATTTTTCCCCATAGATGGCAACA CGTGTGCACAGGCAGAGGACGCCGCCGTTTTTCAGTCAGTTTTTCCTCCG CCTCTACTTCGTGTTGGTACGGTCAGGAGCAATTGGATAAGAAGCTCCTC GAGCGACAGGCGCTGGAGACAGGAATTTGCCCTGTTCGGGAAGACCTTTA CACGCAAGCGTTCGGTAAGTCCCGCCATCTAGTTCTTCCGCCGTGAGCGT GCCACATTATGTGCTAATATCTGTGCTGCTGCCTCTGTTCCGCGTCAACC ATGGCGGGCACGTTGCATGATGTCACCCACTCAATCGCAGCAACAGCAAT TCAAACGTTGTATCTATACGGCTGTCAGGGCTGTGGAACCGGAGATTGAT AATAGCCCGGTTCGGCTCTTTGTTCTGACTCTCGAATTATGTTTTTTTGC GTCTTTTGACATACAACTTTTATTGGATATTTGTGGCATTTGTAGGCCGA ACTCGTTACTTGGGCTTCGCCATCTAAAGACGAGTGATACTCGCTGAAGA TAGATGCTACGGTCTCCTTGTTAGCCTAACCAGATGTTGAATTTTCCTAT AACGAATCGTTCTGGGAGCAAGCATCGGATCGCCCTCAACTACCATGTTT GTTTTCCAGCAAAGATGATCAGAGTAGCTACCAGATGATTTGTTAACAAG ATGCTCGGACATTATAAAGCATTCTGCATAGTCTACTTTCTTATCTTGCC CCCGTGCTTGGCGACAGACGAGCTGATCCGACATGTGACACTAGACGGTC CGGAGCGCGGGCTCTTGTGCTTGCGGGTGCGCGACGAGATCAGAATGACC ATCGACGCGTATAAAACTCTGTACGACAGTAGCGTGACCTTCGGCGTTAA AAAGCAGCTGCAGGCAGAGCAAGGGATGGCAGAGATGGAGGATCAGGTGA TGTACAGAGCTATCTCTGATGTGGCATATCTAGATGCGTGCAACTGAGAC AGGACGAGTAGTTTCTGAAGGGTCGTGTGCGGCAAGGAGGTTCATTCCGA GAGCGTTTGCCCAAAGGGACCACAAGCACGCATTTTTGGCGTATTTCGAG AGAGACTGGGGTCGATTGGCTGTCGATTGCACACGTAGAACTAAGCATAC ACTCCCAATGATTCGGAGCCTAGGCAAGTCTATTTTTTTAGAACTACATC CCATACGTGCCAAGGTTAGGTTTCTATGTTGCCATTCCGGCCACCCCTTT GCTCCTCTTCTACACTGCCTAATCAATCTGAAGCGCTTTTTATATTTGTG CCTGGCGTGCCTCCGATTTTTCCTGCGGTCAGATTGCTCGATTGGAGGAG AACAAGAAAGAATTGGAGCTGCACGTGTCAGAATTGAGGAATAAGGTCAG TCAAGAGAACCAAGAACGCGCCTATCTAAGCGTGTCCCCCCAAAAGAGTA GTTGAAGAGCTTTGCTTTGAGAGTATTCTTTGCTATGCACTATGTAAATG TATGTAGTAGTCCTTGAAAGAAGAACCTCGACTTTAACAATTGACAAAAC TGCCACCATATATATGCCATTTACCGCAGTGCCATCCGAACTGCTCCCAG TTCCAGATCAAGTCGGTTTTCCTGGACTATCCTATCCAAGTCTACTTTCT TGCCGCTGACAAATATAGATATCTAGTGCGTTGACACAATACTCCGAAGT ACAAAAGGGGATTTTGTGACGCCACGACATTTCCTCGCAAGACCTATACG AGTATTATATATGTGGCCAGACGTGCATCACCAACTCAACACGCCGAGGG CAAAGGTAACACAAACTTCCAGTCCTATGTACATGGTCTCGGGGGTTTTG AATCCAGCCTATTTGTCTTTCTTCCTTTTTCCGGCACGAGCGTGCATATA TTTTTCATCCACAACACAAGGGCCACCGTACGGCATCAATCTGCTGCTGT ACCACCGCGTCCAACAGCAGTAGAACTGATAGTGGACTGGGCCACACTCA ACCGCGTGTGCACACGTACACGTACGTGCAATTTCCAGGTGGAGGTGATC GAGAAGGGGGAGAGCGAGCGCCGCGCGGTAGACGACAAAAAGCGGAAGGA GGAGGTGGACTTCCTCAAGTACCAGGGGCAGCACCTAGACTCTTTCCTCA AGCAGATCGGCGGTAGCAAATAACCATTGCTTACGCCACTATTTAGCTGT TGCGCACGCGGGTTCCACTACTGCTGCGATGTATTCGTAAGCCCACGACG ATGGGATCGAGCCGAGACAGAGCGAGCCAGACCCGGTGCTTATTTAATTA GCCACTTTTTTTCGTTTGATTGAGTCACGTCAAGTCCGTGGACCAAACGA ATACGTTCGAAAGCAGTGAGAACACG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8046:692..4767-

>mRNA_L-elsbetiae_contig8046.17034.1 ID=mRNA_L-elsbetiae_contig8046.17034.1|Name=mRNA_L-elsbetiae_contig8046.17034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1602bp|location=Sequence derived from alignment at L-elsbetiae_contig8046:692..4767- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGCAGGGCCGGACATCGCCCAGCAGGGGATGCAATTCCCTATGGA
CGTGCCGCCAACGCTGGTAAAGTTCGATCCTCCGATCTTTGCCGGTCTTG
AGCCTTCGTCCGAGGCCAACAGTAATCGCATCAACAACAATAGCGGCAAT
GAACCGCGGGGAGGGGGTCGAGGGGGTGGCGGCAAGGGGAATAACGGGAA
TCACGGAAAGACGTCTCAGCTGGACGATATGGTCAACTCGATGCTGCCAC
CGCGAGAGTGGACGGAAGAGACGGGGACGTGGATGCAGTATGTCAGCAAA
GATCCCGCAACGAGGTTGGCGGTCATCACGCTGCAGATGGACGCAGGGCC
GGACATCGCCCAGCAGGGGATGCAATTCCCTATGGACGTGCCGCCAACGC
TGGTAAAGTTCGATCCTCCGATCTTTGCCGGTCTTGAGCCTTCGTCCGAG
GCCAACAGTAATCGCATCAACAACAATAGCGGCAATGAACCGCGGGGAGG
GGGTCGAGGGGGTGGCGGCAAGGGGAATAACGGGAATCACGGAAAGACGT
CTCAGCTGGACGATATGGTCAACTCGATGCTGCCACCGCGAGAGTGGACG
GAAGAGACGGGGACGTGGATGCAGTATGTCAGCAAAGATCCCGCAACGAG
GTTGGCGGTCATCACGCTGCAGGAGCAATTGGATAAGAAGCTCCTCGAGC
GACAGGCGCTGGAGACAGGAATTTGCCCTGTTCGGGAAGACCTTTACACG
CAAGCGTTCGGAGCAATTGGATAAGAAGCTCCTCGAGCGACAGGCGCTGG
AGACAGGAATTTGCCCTGTTCGGGAAGACCTTTACACGCAAGCGTTCGAC
GAGCTGATCCGACATGTGACACTAGACGGTCCGGAGCGCGGGCTCTTGTG
CTTGCGGGTGCGCGACGAGATCAGAATGACCATCGACGCGTATAAAACTC
TGTACGACAGTAGCGTGACCTTCGGCGTTAAAAAGCAGCTGCAGGCAGAG
CAAGGGATGGCAGAGATGGAGGATCAGACGAGCTGATCCGACATGTGACA
CTAGACGGTCCGGAGCGCGGGCTCTTGTGCTTGCGGGTGCGCGACGAGAT
CAGAATGACCATCGACGCGTATAAAACTCTGTACGACAGTAGCGTGACCT
TCGGCGTTAAAAAGCAGCTGCAGGCAGAGCAAGGGATGGCAGAGATGGAG
GATCAGATTGCTCGATTGGAGGAGAACAAGAAAGAATTGGAGCTGCACGT
GTCAGAATTGAGGAATAAGATTGCTCGATTGGAGGAGAACAAGAAAGAAT
TGGAGCTGCACGTGTCAGAATTGAGGAATAAGGTGGAGGTGATCGAGAAG
GGGGAGAGCGAGCGCCGCGCGGTAGACGACAAAAAGCGGAAGGAGGAGGT
GGACTTCCTCAAGTACCAGGGGCAGCACCTAGACTCTTTCCTCAAGCAGA
TCGGCGGTAGCAAATAAGTGGAGGTGATCGAGAAGGGGGAGAGCGAGCGC
CGCGCGGTAGACGACAAAAAGCGGAAGGAGGAGGTGGACTTCCTCAAGTA
CCAGGGGCAGCACCTAGACTCTTTCCTCAAGCAGATCGGCGGTAGCAAAT
AA
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