prot_L-elsbetiae_contig7921.16881.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7921.16881.1
Unique Nameprot_L-elsbetiae_contig7921.16881.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length858
Homology
BLAST of mRNA_L-elsbetiae_contig7921.16881.1 vs. uniprot
Match: D8LS52_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS52_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.560e-109
Identity = 256/574 (44.60%), Postives = 313/574 (54.53%), Query Frame = 0
Query:   42 PSPVVVLLCPGSKMSTTKQTIAASKPSVENELRASCDRCWSKKRRCPGGNPCLRCRRGSFVCHYSRKRKLGRPAGSGSKSDSKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGRYEPDGGMITALKNPSFVCSSATGLAGLPESRFLSCFLEHYAPMCGFADAVSVRDGLVHAFAGRWMANTPSHAKPELQPAEVMRGHALECSLFSAITIGGLALGAPAAAVSRHLNAARRNLAKCGE-LREAPAVSALVLYGVANALLPPFDLHGGXXXXXXXXXXXXXXXXXDTSLDNAQALHEGLPFKDPLMTAFLTYRAMCDNLLSVLTNSAYSVNPAYVSGRRDLAVGAASNGASYGXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXGGIAHAPPTKAAHPSYVVSHMMTLIFRYVCADNQGEDGVQSGWHHTHDYVEAELHRLSREQAGAMASRRGISYVLTTLAGNLLATKPRVGTTEGMLPVAEMALPMFLKCPGLLRHYSLHNAHMMLTVFKLYGQRKSYDDLRQQVVMATKNEMATFDEFGVGVPICDT 614
            P+ VV    P S+    +   A ++ +   ELR+SCDRCW KKRRCPGG PCLRCRRGS  C YS KRKLGRP    S  ++               XXXXXXXXXXXXXXXXXX       XXXX      ++       + +  PSF  SSATGL GL ES FL CFL+H +PMC  AD  SVR GLVHAF  RW     +     +   EVMRG A+EC+LFSA+ IGGL LG P   V+RHL AAR+ L +    L E  AV+AL+LYG+ANALLPP D  G                   +S+D+AQ +   L  +DP + AF+TYR  CDNL++ + +S YSVNP  +SGRR      A    S G                   +                        K AHP+YVV+  MTL+ R+VC     E  V++GW + HD + +EL+RL +EQAGA+        VLTTLAGNL+A K R+GT+EGMLPVAE+ L MF KCPGLLR                    KS+D LR  VV AT+  M TFDEFGVGV IC T
Sbjct:    9 PTLVVDDAAPPSQGKEDEGVYAVNQGNNRGELRSSCDRCWVKKRRCPGGQPCLRCRRGSHSCSYSAKRKLGRPPALASPINAGAVRRAGDNGVSSISXXXXXXXXXXXXXXXXXXHGNVKREXXXXHGPVTEKH------CSEIVGPSFSSSSATGLGGLQESSFLECFLKHCSPMCAVADERSVRQGLVHAFVSRWTTTASASEASPIDKLEVMRGSAVECTLFSAMAIGGLMLGCPTVTVARHLAAARQCLGRFRSGLCEQSAVAALILYGLANALLPPCDGDGQREYR--------------SSMDDAQEMFGSLEPQDPFVNAFMTYRGTCDNLVAFMPDSLYSVNPVNISGRRGGVTAPAHASTSGGADGGEGGGDQ---------VWKTPGGAMTAGAKQGADAMRVSSAKPAHPAYVVADSMTLVLRFVCM----EGDVRTGWANVHDLISSELNRLFKEQAGAL--------VLTTLAGNLIAAKSRIGTSEGMLPVAEIVLAMFCKCPGLLR--------------------KSFDALRALVVAATEQAMVTFDEFGVGVAICST 521          
BLAST of mRNA_L-elsbetiae_contig7921.16881.1 vs. uniprot
Match: A0A6H5KL78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL78_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 2.040e-93
Identity = 203/417 (48.68%), Postives = 247/417 (59.23%), Query Frame = 0
Query:  217 MCGFADAVSVRDGLVHAFAGRWMANTPSHAKPELQPAEVMRGHALECSLFSAITIGGLALGAPAAAVSRHLNAARRNLAKC-GELREAPAVSALVLYGVANALLPPFDLHGGXXXXXXXXXXXXXXXXXDTSLDNAQALHEGLPFKDPLMTAFLTYRAMCDNLLSVLTNSAYSVNPAYVSGRRDLAVGAASNGASYGXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXGGIAHAPPTKAAHPSYVVSHMMTLIFRYVCADNQGEDGVQSGWHHTHDYVEAELHRLSREQAGAMASRRGISYVLTTLAGNLLATKPRVGTTEGMLPVAEMALPMFLKCPGLLRHYSLHNAHMMLTVFKLYGQRKSYDDLRQQVVMATKNEMATFDEFGVGVPICDTHLCAMTSDIMLEMPISRS 632
            MC  AD  SVR GLVHAF  RW     +     +   EVMRG A+EC+LFSA+ IGGL LG P   VSRHL AAR+ L +    L E  AV+AL+LYG+ANALLPP D  G                   +S+D+A+ +   L  +DP + AF+ YR  CDNL++ + ++ YSVNP  +SGRR      A            XXXXXXXXXXXXX                          K AHP+YVV+  MTL+ R+VC     E  V++GW + HD +  EL RL +EQAGA+        VLTTLAGNL+A K R+GT+EGMLPVAEM L MF KCPGLLRHYSLHNAH+ LT F+LY +RKS+D LR  VV AT+  MATFDEFGVGV IC T +C M SD +    IS S
Sbjct:    2 MCAVADERSVRQGLVHAFVSRWTTTASASEASPINELEVMRGSAIECTLFSAMAIGGLMLGCPTVTVSRHLAAARQCLGRFRSRLCEQSAVAALILYGLANALLPPCDGDGQREYR--------------SSMDHAEEIFGSLELQDPFVNAFMMYRGTCDNLVAFMPDTLYSVNPVNISGRRGGVTAPAQ---------ASXXXXXXXXXXXXXQAWKTPGGATTAGAKQGADAIRVSSAKPAHPAYVVADSMTLVLRFVCM----EGDVRTGWANVHDLISTELSRLFKEQAGAL--------VLTTLAGNLIAAKSRIGTSEGMLPVAEMVLAMFCKCPGLLRHYSLHNAHLALTAFRLYNRRKSFDALRALVVAATEQAMATFDEFGVGVAICSTDVCWMCSDTIFTTGISPS 383          
BLAST of mRNA_L-elsbetiae_contig7921.16881.1 vs. uniprot
Match: A0A6H5KXY9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXY9_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.320e-66
Identity = 215/653 (32.92%), Postives = 290/653 (44.41%), Query Frame = 0
Query:   67 PSVENELRASCDRCWSKKRRCPGGNPCLRCRRGSFVCHYSRKRKLGRPAGSGSKSDS----KRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGRYEPDGGMITALKNPSFVCSSATGLAGLPESRFLSCFLEHYAPMCGFADAVSVRDGLVHAFAGRWMANTPSHAKPELQPAEVMRGHALECSLFSAITIGGLALGAPAAAVSRHLNAARRNLAKCGELREAPAVSALVLYGVANALLPPFDLHGGXXXXXXXXXXXXXXXXXDTSLDNAQALHEGLPFKDPLMTAFLTYRAMCDNLLSV--------------------------------------LTNSAYSVNPAYVSGRRDLAVG-AASNGASYGXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXGGIAHAPPTKAAHPSYVVSHMMTLIFRYVCADNQGEDGVQSGWHHTHDYVEAELHRLSREQAGAMASRRGISYVLTTLAGNLLATKPRVGTTEGMLPVAEMALPMFLKCPGLLRHYSLHNAHMMLTVFKLYGQRKSYDDLRQQVVMATKNEMATFDEFGVGVPICDTHLCAMTSDIMLEMPISRSPDGDGSESSPGPPDGTGVL--GSRGLSRGLPPFAEPLSGGGGVG 674
            P   + LR+SCD CW KK +C G  PC RC R    C YS KR+LGRP G+ +K +     KRK                                                   DGG  +AL    F  +  TGL GLPESRFLS F EH+ PM   AD VS+RDGL+H+FAG W    P+     L   E  RG  LEC+  S++ IGGL  G P  A++ H+ +A+ + A C  L +  A SALVL G+ N LLP                           LD A+A+ E LP ++PL+ A LT+R   ++L  +                                      +  S  + +    +G    + G  +S+G   G  XXXXXXXXXXXXX                            ++ AHPS+VV+  + L  R++     G  G  S   H HD+V +EL+RL   +AGA+        VL +LAG LLA K R+  T+GMLP+AE+   M  KCPG  R Y  H AH+ L VF+L+G R SYD+L   V   + + +  F++ G G   C    C + S+ +  +P+     G G +++ G   G  V   GSR  SR  P    P S  GG G
Sbjct:   21 PFALSLLRSSCDACWKKKCKCSGELPCQRCERTGGNCQYSTKRRLGRPRGAAAKLEGGGAGKRKATASF----------------------------------------------DGGNDSALAKAPFAAAPVTGLGGLPESRFLSAFFEHFIPMFPVADEVSIRDGLMHSFAGMWHGGAPT-----LHGQEASRGRTLECAFLSSVAIGGLLSGQPPEAMASHVESAQASAANCRGLSDKHASSALVLSGMMNLLLP----------------GERSSAAGRRCLDEAEAIFEALPEREPLVAAILTFRRQVESLALIDAATLCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQVVESPRASSSFPEAGDAGASGGDVSSHGGGKGLAXXXXXXXXXXXXXGEAHTDEGRSILAGVDVVRRDSKCSPLTSQPAHPSFVVADALLLTVRFM---RGGGTGGVSQLRHVHDFVASELNRLVPARAGAL--------VLISLAGTLLAIKTRLQLTDGMLPMAELTTAMLTKCPGWGRSYGRHAAHLSLAVFRLHGHRHSYDNLSDLVRKTSDDPIPPFEDSGGGGQACRLGACRVLSESLSALPLP----GTGDDTARGGTGGGTVSSSGSRKNSRKRPGEPRPPSSPGGRG 591          
BLAST of mRNA_L-elsbetiae_contig7921.16881.1 vs. uniprot
Match: D8LU85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU85_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.910e-31
Identity = 159/448 (35.49%), Postives = 215/448 (47.99%), Query Frame = 0
Query:  231 VHAFAGRWMANTPSHAKPELQPAEVMRGHALECSLFSAITIGGLALGAPAAAVSRHLNAARRNLAKCGELREAPAVSALVLYGVANALLPPFDLHGGXXXXXXXXXXXXXXXXXDTSLDNAQALHEGLPFKDPLMTAFLTYRAMCDNLLSVLTNSAYSVNPAYVSGRRDLAVGAASNGASYGXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXG---------------------GIAH--------------------APPT-KAAHPSYVVSHMMTLIFRYVCADNQGEDGVQSGWHHTHDYVEAELHRLSREQAGAMASRRGISYVLTTLAGNLLATKPRVGTTEGMLPVAEMALPMFLKCPGLLRHYSLHNAHMMLTVFKLYGQRKSYDDLRQQVVMATKNEMATFDEFGVGVP--ICDTHLCAMTSDIMLEMPISRSPD 634
            +H+FAG W    P+     L   E  RG  LEC+  S++ IGGL  G P   ++ H+ +A+ + A C  L +  + SALVL G+ N LLP                           LD A+A+ E LP ++PL+ A LT+R   ++L  +    A ++ P                     XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX                      G AH                    AP T + AHPS+VV+  + L  R++     G  G  S   H HD+V +EL+RL   +AGA+        VL +LAG LLA K R+  T+GMLP+AE+   M  KCPG  R Y  H AH+ L VF+L+G R SYD L   V   + + + +FD+ G G     C    C + S+ +  + +  + D
Sbjct:    1 MHSFAGMWHGGAPT-----LHGQEASRGRTLECAFLSSVAIGGLLSGQPPEVMASHVESAQASAASCRGLSDKHSSSALVLSGMMNLLLP----------------GERSSAAGRRCLDEAEAIFEALPEREPLVAAILTFRRQVESLALI---DAATLCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDGEAHTDEGRSILAGVDVVRRDSKCAPLTAQPAHPSFVVADALLLTVRFM---RGGGTGGISQLRHVHDFVASELNRLVPARAGAL--------VLISLAGTLLAIKTRLQLTDGMLPMAELTTAMLTKCPGWGRSYGRHAAHLALAVFRLHGHRHSYDTLSDLVRKTSDDPIPSFDDSGGGYGGHACGLGACRVLSESLSALSLPGTGD 413          
BLAST of mRNA_L-elsbetiae_contig7921.16881.1 vs. uniprot
Match: A0A6H5KDQ8_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ8_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 2.530e-20
Identity = 61/146 (41.78%), Postives = 68/146 (46.58%), Query Frame = 0
Query:   72 ELRASCDRCWSKKRRCPGGNPCLRCRRGSFVCHYSRKRKLGRPAGSGSKSDSKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGRYEPDGGMITALKNPSFVCSSATGLAGLPESRFLSCFLEHYAPM 217
            ELR+SCDRCW KKRRCPGG PCLRCRRGS  C YS KRKLGRP    S  ++                                              XAG          + +  PSF  SSATGL GL ES FL CFL+H +PM
Sbjct:   39 ELRSSCDRCWVKKRRCPGGQPCLRCRRGSHSCSYSAKRKLGRPPALASPINA----------------------GAVRRAGDNGDSTTSSSSRPTHHHXAGAHLPVTEKHYSEIVGPSFSSSSATGLGGLQESSFLECFLKHCSPM 162          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7921.16881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LS52_ECTSI1.560e-10944.60Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5KL78_9PHAE2.040e-9348.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXY9_9PHAE1.320e-6632.92Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU85_ECTSI1.910e-3135.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDQ8_9PHAE2.530e-2041.78Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 71..114
e-value: 2.9E-4
score: 30.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 76..110
e-value: 4.1E-6
score: 26.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 76..105
score: 8.973
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 72..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7921contigL-elsbetiae_contig7921:2850..8541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7921.16881.1mRNA_L-elsbetiae_contig7921.16881.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7921 2848..8541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7921.16881.1 ID=prot_L-elsbetiae_contig7921.16881.1|Name=mRNA_L-elsbetiae_contig7921.16881.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=858bp
TAAVFAETTTRRASVPIQQKGGDLYGHVSSGQSSPRLQTGFPSPVVVLLC
PGSKMSTTKQTIAASKPSVENELRASCDRCWSKKRRCPGGNPCLRCRRGS
FVCHYSRKRKLGRPAGSGSKSDSKRKQPPTATRRKQQQRYCQQPKQERKE
QQGGQQEEKQQQHQEVSTSAAGGRYEPDGGMITALKNPSFVCSSATGLAG
LPESRFLSCFLEHYAPMCGFADAVSVRDGLVHAFAGRWMANTPSHAKPEL
QPAEVMRGHALECSLFSAITIGGLALGAPAAAVSRHLNAARRNLAKCGEL
REAPAVSALVLYGVANALLPPFDLHGGGGGGGGQEQRQRQQQEDDTSLDN
AQALHEGLPFKDPLMTAFLTYRAMCDNLLSVLTNSAYSVNPAYVSGRRDL
AVGAASNGASYGGGGASCGGGGGGGGGGGGGIGGGVGGGVGGGVGGGGGI
AHAPPTKAAHPSYVVSHMMTLIFRYVCADNQGEDGVQSGWHHTHDYVEAE
LHRLSREQAGAMASRRGISYVLTTLAGNLLATKPRVGTTEGMLPVAEMAL
PMFLKCPGLLRHYSLHNAHMMLTVFKLYGQRKSYDDLRQQVVMATKNEMA
TFDEFGVGVPICDTHLCAMTSDIMLEMPISRSPDGDGSESSPGPPDGTGV
LGSRGLSRGLPPFAEPLSGGGGVGHGGATALPSSSRYLAVRDGSGTSVGG
GVGASEPATARERPVVPAGITKEEPLRCPNNVTASPHSDTPAAAAAVAWS
ARDPGDTPSGCSATAPPGVASPASEGGVDDGDQRQLGASPWGQLDDSLHG
LAADGRGGGCQQQQQQQQQDKDNAAALPCTPSASGLGRLVVASPRGAVVP
FTPMRGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf