mRNA_L-elsbetiae_contig78.16743.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A6H5KWA0_9PHAE (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWA0_9PHAE) HSP 1 Score: 264 bits (674), Expect = 4.890e-87 Identity = 157/202 (77.72%), Postives = 172/202 (85.15%), Query Frame = 1 Query: 4 IMFALAIRGLIVTALIESSSCFV-PSPRAAGAVARVAS-MGPAALPQASISHSPCGGRLCPLSMAEKLGPDETVKKYGLEAGLFKALKDGNEEDAEGGAGAATT-AKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAGEA 600 IMFA RGLIV ALIESSS FV P+ G +AR+ + +G ALP++++S GGR L M EKLGPDETVKKYGLEAGLFKALKDGN+EDA+G AGAATT AKDLLKQYGSAYLITSISLSLVSFGIC+VAVSNGVDMA+LLGKVGIETS+SAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGK +GE A Sbjct: 2 IMFA---RGLIVAALIESSSGFVSPAASRPGTIARLPTPVGAVALPRSAVSR---GGRSFTLGMVEKLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGICFVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEEAAA 197
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A8J6CCF1_DIALT (DUF1279 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCF1_DIALT) HSP 1 Score: 157 bits (398), Expect = 4.530e-46 Identity = 83/132 (62.88%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 205 PDETVKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAGEA 600 P+E KK+GLEAG+F AL + +D GG GA TTAKDLL QYG+AYL+TSI L++VSF +CY+ V NGVD++ALL KVGI S E GTVA+AYA HKAASPIRFPPTVALTP VA+ +GK + G+A Sbjct: 10 PEEVTKKWGLEAGIFSALTN---KDGSGGKGAMTTAKDLLAQYGAAYLLTSIPLAIVSFALCYLLVDNGVDVSALLAKVGISVSGGTEKVGTVAIAYAAHKAASPIRFPPTVALTPVVARLIGKKK-DGGDA 137
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A7S1UM22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UM22_9STRA) HSP 1 Score: 158 bits (400), Expect = 7.100e-46 Identity = 92/163 (56.44%), Postives = 109/163 (66.87%), Query Frame = 1 Query: 124 AALPQASISH-SPCGGRLCPLSMAEKLGPDETVKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAGEAEEE 609 AA P A++ +P R AEK +E +KYGLE GLFK LK G + G+ TAKDLL +YG+AYL TSISL+LVSF CY V NGVD+A+LL KVGI S ++ET GTVA+AYA+HKAASPIRFPPTVALTP VA+F G EAE E Sbjct: 18 AAAPAAALRRPAPAAARPSHQVWAEKDDMEEVTEKYGLEVGLFKTLKSGEK-------GSGQTAKDLLAKYGAAYLTTSISLALVSFATCYYLVDNGVDVASLLAKVGISVSGTSETAGTVAIAYAVHKAASPIRFPPTVALTPVVARFFGNDGEAESEAESE 173
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A061R5E1_9CHLO (Protein fam210b-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5E1_9CHLO) HSP 1 Score: 155 bits (392), Expect = 2.160e-44 Identity = 84/126 (66.67%), Postives = 98/126 (77.78%), Query Frame = 1 Query: 211 ETVKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGE 588 ET +KYGLEAGLFK D + + A+ AT AK+LLK+YGSAYLITSIS ++VS+ ICYV V GVD+AALLGKVGI TS+++E GT A+AYA HKAASPIRFPPTVALTP VAK LGK E Sbjct: 68 ETTEKYGLEAGLFKVFTDKSSDSAK----KATDAKELLKRYGSAYLITSISFAIVSYAICYVLVDQGVDVAALLGKVGISTSATSEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLLGKKVDE 189
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A7S1SLD8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLD8_9CHLO) HSP 1 Score: 153 bits (387), Expect = 1.030e-43 Identity = 87/133 (65.41%), Postives = 100/133 (75.19%), Query Frame = 1 Query: 211 ETVKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAGEAEEE 609 ET KKYGLEAGLFKAL D +++ A AK LLKQYGSAYLITS+S ++VS+ ICY V GVD+A+LL KVGI TSS++E GT A+AYA HKAASPIRFPPTVALTP VAK +GK EA E EEE Sbjct: 63 ETAKKYGLEAGLFKALTDRSKDKVT----KAADAKTLLKQYGSAYLITSVSFAIVSYAICYFLVDQGVDVASLLSKVGITTSSTSEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLIGK---EAKEEEEE 188
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A835YRB9_9STRA (Transmembrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB9_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.010e-43 Identity = 81/135 (60.00%), Postives = 98/135 (72.59%), Query Frame = 1 Query: 205 PDETVKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAGEAEEE 609 P+ +KYGLEAGLF +K G + + AK+LLK+YG AYLITSIS +LVSF ICYV V +GVD+AALL KVGI+ +++ E GT A+AYA HKAASPIRFPPTVALTP VAKFLGK E +A+ E Sbjct: 61 PEAVTEKYGLEAGLFSVMKSGGQNRGQ-------QAKELLKRYGGAYLITSISFALVSFSICYVLVDSGVDVAALLNKVGIDATATTEKAGTFAIAYAAHKAASPIRFPPTVALTPVVAKFLGKKVDETADADSE 188
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A7S4D855_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D855_HETAK) HSP 1 Score: 151 bits (382), Expect = 4.600e-43 Identity = 84/130 (64.62%), Postives = 103/130 (79.23%), Query Frame = 1 Query: 208 DETVKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAGE 597 +ET KKYGLEAGLFK+++ +E D E ++AK+LLK+YGSAYL+TSISL++VSF +CYV V NGVD+A LL KVGIETS+++E GT A+AYA HKAASPIRFPPTVALTP VA LG+ AGE Sbjct: 59 EETTKKYGLEAGLFKSMQ--SEGDGES---KVSSAKELLKKYGSAYLVTSISLAIVSFSLCYVMVDNGVDVAGLLSKVGIETSATSEKVGTFALAYAAHKAASPIRFPPTVALTPVVANLLGQE--AAGE 181
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A7R9U8Q2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Q2_9STRA) HSP 1 Score: 150 bits (379), Expect = 7.580e-43 Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 1 Query: 190 AEKLGPDETVKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAG 594 A+K +E +K+GLEAGLFK+L+ G EGGA TAKDLL +YG+AYL TSISL+ VSFGIC+ V GVD+AALL VGIE S ++ET T+A+AYA+HKAASPIRFPPTVALTP VA+F GK G Sbjct: 37 AQKEDVEEVTEKFGLEAGLFKSLRSG-----EGGA---ATAKDLLAKYGAAYLATSISLAAVSFGICFALVDKGVDVAALLKNVGIEVSGTSETASTLAIAYAVHKAASPIRFPPTVALTPVVARFFGKKEETEG 163
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A8J2S4Y9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4Y9_9STRA) HSP 1 Score: 150 bits (380), Expect = 9.220e-43 Identity = 83/128 (64.84%), Postives = 97/128 (75.78%), Query Frame = 1 Query: 211 ETVKKYGLEAGLFKALK-DGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEA 591 ETV+K G+E GLF DG+ ++ ATTA DLLKQYG AYL+TS S ++VSF ICY VSNGVD+A LLGK+GIE S +A+T GT A+AYA HKAASPIRFPPTVALTP VAK LGK +GEA Sbjct: 54 ETVEKSGVEGGLFSIFTGDGDAKEK------ATTAGDLLKQYGGAYLLTSTSFAIVSFAICYTLVSNGVDVAGLLGKIGIEPSQNAQTGGTFAIAYAAHKAASPIRFPPTVALTPVVAKMLGKGDGEA 175
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Match: A0A7S3F2S8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F2S8_9EUKA) HSP 1 Score: 148 bits (373), Expect = 2.150e-42 Identity = 81/129 (62.79%), Postives = 98/129 (75.97%), Query Frame = 1 Query: 217 VKKYGLEAGLFKALKDGNEEDAEGGAGAATTAKDLLKQYGSAYLITSISLSLVSFGICYVAVSNGVDMAALLGKVGIETSSSAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKSNGEAGEAE 603 +K+GLEAGLF A + D + G+ TA DLLK+YG AYL+TS SL+LVSF +CY+AV NGVD+A+LLGKVGIE SS++ET GTV +AYAIHKAASPIRFPPTVALTP VA+ + EA E E Sbjct: 2 TEKFGLEAGLFSAFRSAASGDEK--KGSMATAGDLLKRYGGAYLLTSTSLALVSFSLCYLAVDNGVDIASLLGKVGIEVSSTSETVGTVGIAYAIHKAASPIRFPPTVALTPVVARKVFGKQEEAEEPE 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig78.16743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig78.16743.1 >prot_L-elsbetiae_contig78.16743.1 ID=prot_L-elsbetiae_contig78.16743.1|Name=mRNA_L-elsbetiae_contig78.16743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MFALAIRGLIVTALIESSSCFVPSPRAAGAVARVASMGPAALPQASISHSback to top mRNA from alignment at L-elsbetiae_contig78:6269..6880- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig78.16743.1 ID=mRNA_L-elsbetiae_contig78.16743.1|Name=mRNA_L-elsbetiae_contig78.16743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig78:6269..6880- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig78:6269..6880- >mRNA_L-elsbetiae_contig78.16743.1 ID=mRNA_L-elsbetiae_contig78.16743.1|Name=mRNA_L-elsbetiae_contig78.16743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig78:6269..6880- (Laminarionema elsbetiae ELsaHSoW15)back to top |