prot_L-elsbetiae_contig7721.16671.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7721.16671.1
Unique Nameprot_L-elsbetiae_contig7721.16671.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length358
Homology
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BLAST of mRNA_L-elsbetiae_contig7721.16671.1 vs. uniprot
Match: D7FM61_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM61_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 6.350e-83
Identity = 269/358 (75.14%), Postives = 287/358 (80.17%), Query Frame = 0 
Query:    1 MAMSRGSTGDIILQGGRKLDLRDRSLSTQDVTALADLLSTRRTEVSTLILYNVRLNSDDAVSLARALEFNDTLATLNFTHNPIGEVGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVEGGSRLETLSLANTGISDXXXXXXXXXLVGNAWLRRLVVAKLELSPQVLQGREGGAGEGVTAASKGLQTIDLSGQALSATLDYPIVCRLIAGNPRLARLRLSRAGLCGVTSGGRGRRSLVGLHSLALTLKAAPPRLVVLDIGHNFVDDEAMEVVARGLEKNRVLTTLILQGNGVGEK 358
            M+M RGST D ILQG  ++DLRDRSLSTQDVTALA LLST  ++VS LILYNVRLNS                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLA EGGSRLE LSLANTG+++         LVGN WLRRL +AK++L+PQVL GR    GE   AASKGLQTIDLSGQALSATLDYPIVCRL A NPRLARLRLSRAGLCGVTSGGRGRRSL GL SLALTLKA PPRLVVLDIGHNF+DD A+EV+A GLE+NRVLT LILQGNG+G+K
Sbjct:    1 MSMWRGSTADAILQGDHRIDLRDRSLSTQDVTALAKLLSTS-SQVSALILYNVRLNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEEGGSRLERLSLANTGVTESGAEALGDALVGNLWLRRLTMAKIDLAPQVLLGRVQ-EGEESAAASKGLQTIDLSGQALSATLDYPIVCRLAARNPRLARLRLSRAGLCGVTSGGRGRRSLAGLRSLALTLKAGPPRLVVLDIGHNFIDDSAIEVIATGLEENRVLTNLILQGNGIGDK 356
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BLAST of mRNA_L-elsbetiae_contig7721.16671.1 vs. uniprot
Match: A0A6H5L0N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N8_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 4.150e-74
Identity = 138/180 (76.67%), Postives = 152/180 (84.44%), Query Frame = 0 
Query:  179 LAVEGGSRLETLSLANTGISDXXXXXXXXXLVGNAWLRRLVVAKLELSPQVLQGREGGAGEGVTAASKGLQTIDLSGQALSATLDYPIVCRLIAGNPRLARLRLSRAGLCGVTSGGRGRRSLVGLHSLALTLKAAPPRLVVLDIGHNFVDDEAMEVVARGLEKNRVLTTLILQGNGVGEK 358
            LA EGGSRLE LSLANTG+++         LVGN WLRRL +AK++L+PQVL GR    GE   AA+KGLQTIDLSGQALSATLDYPIVCRL A NPRLARLRLSRAGLCGVTSGGRGRRSL GL SLALTLKAAPPRLVVLDIGHNF+DD A+EV+A GLE+NRVLT LILQGNG+G+K
Sbjct:  102 LAEEGGSRLERLSLANTGVTESGAEALGDALVGNLWLRRLTMAKIDLAPQVLLGRVQ-EGEESAAAAKGLQTIDLSGQALSATLDYPIVCRLAARNPRLARLRLSRAGLCGVTSGGRGRRSLAGLRSLALTLKAAPPRLVVLDIGHNFIDDSAIEVIATGLEENRVLTNLILQGNGIGDK 280
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BLAST of mRNA_L-elsbetiae_contig7721.16671.1 vs. uniprot
Match: A0A835ZHN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.440e-19
Identity = 192/361 (53.19%), Postives = 233/361 (64.54%), Query Frame = 0 
Query:    3 MSRGSTGDIILQGGRK--LDLRDRSLSTQDVTALADLLSTRRTEVSTLILYNVRLNSDDAVSLARALEFNDTLATLNFTHNPIGEVGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVEGGSRLETLSLANTGISDXXXXXXXXXLVGNAWLRRLVVAKLELSPQVLQGREGGAGEGVTAASK------GLQTIDLSGQALSATLDYPIVCRLIAGNPRLARLRLSRAGLCGVTSGGRGRRSLVGLHSLALTLKAAPPRLVVLDIGHNFVDDEAMEVVARGLEKNRVLTTLILQGNGV 355
            M+ G+  +++    +   LDL DR +  +DV ALA +L+ R   +++L L NV++N+DDA+ LA+ALEFN +L  L+F HNP+G VG AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     XXXXXXXXX       + L +A+LELS  +L+G                        + LS   LSA LDYP++  L+A N  + RL L+ AGLCG+   GRGRR+L G  +LA  L AA   +  LD+  NF+DD A+ V+A G      LT L L  N +
Sbjct:    1 MAAGALAELLQLSSKTHFLDLSDRVVKGEDVRALARVLTDRTHNLTSLNLSNVKINADDAMILAKALEFNISLRHLSFEHNPLGYVGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--QSLALARLELSLPLLRGAAXXXXXXXXXXXXXXXPPAAAAVLSLSNSPLSAELDYPVIMPLVARNAAVTRLALAGAGLCGIAPDGRGRRALTGARALACAL-AAHGAVTALDLRRNFIDDAAVAVLAEGARALPALTALNLSSNDI 358
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7721.16671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FM61_ECTSI6.350e-8375.14Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5L0N8_9PHAE4.150e-7476.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHN6_9STRA4.440e-1953.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 98..125
e-value: 22.0
score: 7.7
coord: 314..341
e-value: 7.9
score: 10.8
coord: 184..211
e-value: 1.1
score: 17.0
coord: 154..181
e-value: 3.4E-5
score: 33.3
coord: 70..97
e-value: 2.4
score: 14.5
coord: 126..153
e-value: 0.39
score: 19.8
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 18..219
coord: 181..354
NoneNo IPR availablePANTHERPTHR24114:SF30LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74Acoord: 18..219
coord: 181..354
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 16..356
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 115..235
e-value: 1.2E-23
score: 85.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 15..114
e-value: 1.1E-17
score: 66.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 236..358
e-value: 3.2E-12
score: 47.8
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 154..176
e-value: 8.2E-5
score: 22.4
coord: 186..205
e-value: 0.2
score: 11.8
coord: 126..148
e-value: 0.037
score: 14.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7721contigL-elsbetiae_contig7721:3892..8423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7721.16671.1mRNA_L-elsbetiae_contig7721.16671.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7721 3851..8423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7721.16671.1 ID=prot_L-elsbetiae_contig7721.16671.1|Name=mRNA_L-elsbetiae_contig7721.16671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=358bp
MAMSRGSTGDIILQGGRKLDLRDRSLSTQDVTALADLLSTRRTEVSTLIL
YNVRLNSDDAVSLARALEFNDTLATLNFTHNPIGEVGTAALAEMIKFNTT
IREVSLANTVLNSQACALLADALIMNRTLESLNLEKNRIAAQGAQFLATA
LGDNETLRSLRLDGNQIGDAGARSIAAALAVEGGSRLETLSLANTGISDT
GAAALGDALVGNAWLRRLVVAKLELSPQVLQGREGGAGEGVTAASKGLQT
IDLSGQALSATLDYPIVCRLIAGNPRLARLRLSRAGLCGVTSGGRGRRSL
VGLHSLALTLKAAPPRLVVLDIGHNFVDDEAMEVVARGLEKNRVLTTLIL
QGNGVGEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt