mRNA_L-elsbetiae_contig7714.16658.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: D7G913_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G913_ECTSI) HSP 1 Score: 618 bits (1593), Expect = 1.820e-208 Identity = 401/752 (53.32%), Postives = 446/752 (59.31%), Query Frame = 2 Query: 2 QLSVEGTNPMAKEFTPS-----AGSAIEAHAGGAHPRTLRSASETSNRVFSAAVGSEVKTAALEVRPQSPY-SSEQRHLRKLPRPPGPIL----PSQASSSPTFSRGDRGQQHTRHQQVGGTSWPIRAAGAAGHPGPTLPSKHRLGVSNHGHVSSPPGFPPRGAAQQRNSRMQVQSPGAFPGPSQRRDRVVPNKHHGGKFGQYTDGTWVPNDRVPSSKAGAQFVGIAHSVRSQQXXXXXXXXXXXXTRTVAPFPQAQSHDQSENRIRTKACNSTGRDRNHDEAGGRIQRVDQNQVVSKGPSRQRTQTQPGVHRVSHGQANHPGQDAPTKASSGRQEVFMASAARPM------SAADDFSQR--SASSLPTELGGWYMSRQAAGRLSSTDQXXXXXXXXXXXXXXXXXXXXFEAASSRETSHELSSGRWMGNSSERSARQAKPEYEPSAGHSXXXXXXXXXXXXXXXXEDKTYRP-PSKHLLGTGAKEPSRAKMGIRSRLPQRMRLLSGYVRSLLLGIASTFVRMLTWQLNRLRLVRRMLVLVSFTAFFVVSVLSVLITSTSWLFLLGLRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVDVMLNSRFYHARYRAGMSLTNGFRTI 2200 +LSVEGTNPMAKEFTPS A +A+E G H + A ET NRVFSAAVGSEVKTAA E+ PY ++ QR R L PP P A+ S GDR QQH RHQ GG WP+RA HPGPTLPSKHRL ++ G +STGRD HD+ GR QRVDQ Q VS+GPSR R Q QPGV RVSHGQAN P QDA TK SS RQE F+ A+P SA DD SQ+ S S P E G + QA+ LSS+ Q A SS T + SS M +S+ERS+RQA+PE E SA H +D+TYR P+K +LGT KEPSR K+G R L Q++RL+ GY+RS LGI + VR + WQLNRLRLVRRML LVSF A VS+LS +I STSWLFLLGLRLHS+ALKE TGS+HVAVCFLFPYCFQYLVSAID WAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSF LAAVRLRC+FSPIFL+SW+ QVFALATCGSS SLQYGQ+LVSLASLHAVSMVDVMLNSRFYHARYRAGMSLTNGFRT+ Sbjct: 96 RLSVEGTNPMAKEFTPSTCSIPADAAVELPTGSLHAHSRHPAPETVNRVFSAAVGSEVKTAAAEL----PYRTAMQRQSRNLQGPPXXXXXXXXPQPAAQR---SLGDRAQQHPRHQP-GGKPWPVRATVTHSHPGPTLPSKHRLTIAKGG------------------------------------------------------------------------------------------------------------------------SSTGRDHVHDDTVGRGQRVDQVQAVSRGPSRNRIQAQPGVRRVSHGQANSPHQDASTKVSSRRQEDFVDHTAQPSVGSRLESARDDSSQQPMSTSLFPVEQGQEMLPPQASNGLSSSAQRQGSHAERTARDDGEPS---LPATSSSGTPQQSSSSGRMSSSNERSSRQARPEDE-SACHLQSHVHKEKDKGKFKKKDDRTYRAAPNKQVLGTAVKEPSRMKLGTRPSLSQKIRLMGGYLRSSSLGIVAAIVRTIAWQLNRLRLVRRMLTLVSFAASSSVSLLSAVILSTSWLFLLGLRLHSLALKEITGSIHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFTLAAVRLRCIFSPIFLLSWSCQVFALATCGSSASLQYGQVLVSLASLHAVSMVDVMLNSRFYHARYRAGMSLTNGFRTV 715
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: A0A7S2Y1S5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S5_9STRA) HSP 1 Score: 153 bits (386), Expect = 6.470e-37 Identity = 88/227 (38.77%), Postives = 118/227 (51.98%), Query Frame = 2 Query: 1637 LLGLRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSH-------------------------------------------LVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVDVMLNSRFYHARYRAGMSLTNG 2188 L+ + LH AL+EA H+A CF FPY F+YLV A+ +WAPHW P CLWYSFL+Q+FC + + S L P R LLP+ + E SG S++L L GSELLLLSF LAAVR+RC+ SPIFLV+W ++ A++ G LQY QLL +L +L+ VS VD +L+ ++ G + G Sbjct: 99 LVVVHLHKCALREALARPHIAFCFAFPYVFRYLVGALADWAPHWAPVCLWYSFLVQLFCHRQPRNPQAPLSQQXXXXXXXXXXXXXXXXXXSPDSQLEPVNGGGDDASPPEPSVTLQPIFRLLLPLLLIAEGASGHSFVLDLDGSELLLLSFFLAAVRMRCLTSPIFLVAWPLEILAVSAFGPLPVLQYCQLLFALTALYGVSAVDHLLHGGGSPGGHKGGYAYAKG 325
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: A0A7S2FCH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCH2_9STRA) HSP 1 Score: 151 bits (381), Expect = 9.640e-35 Identity = 92/247 (37.25%), Postives = 134/247 (54.25%), Query Frame = 2 Query: 1490 GIASTFVRMLTWQLNRLRLVRRMLVLVSFTAFFVVSVLSVLITSTSWLFLLGLRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHS---------------MSSH-----------------------LVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVS 2116 I +V W R ++ ++++S F+V ++ +++ +FL+ L+LH A++EA + +VA CF+FP+ FQ+LVS + WAPHW P CLWYSFL+Q+ CT S MSS +V R +LP+AF+ E SGR+ LL L G+ELL++SF LAAV+++C+ SPIF+VSWA QV A A G LQY Q +++L SLH S Sbjct: 307 SILPRWVHNTIWYTQRGGILTVAVLILSHVVSFLVCLVGLVLAFMLAIFLMILQLHKYAVREALSNYNVAFCFVFPFNFQFLVSLVKEWAPHWAPVCLWYSFLIQLLCTRGKSSAPSTAGSDVTVGNTASGGMSSQANGTTTNATGGGGAVPSRGTSGGMVSVFRIVLPLAFVAEGVSGRTALLDLNGAELLVVSFLLAAVKMQCISSPIFMVSWAIQVLATAATGFHPVLQYCQFVLALTSLHICS 553
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: A0A7S2B5U5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5U5_9STRA) HSP 1 Score: 151 bits (381), Expect = 7.740e-34 Identity = 92/247 (37.25%), Postives = 134/247 (54.25%), Query Frame = 2 Query: 1490 GIASTFVRMLTWQLNRLRLVRRMLVLVSFTAFFVVSVLSVLITSTSWLFLLGLRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHS---------------MSSH-----------------------LVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVS 2116 I +V W R ++ ++++S F+V ++ +++ +FL+ L+LH A++EA + +VA CF+FP+ FQ+LVS + WAPHW P CLWYSFL+Q+ CT S MSS +V R +LP+AF+ E SGR+ LL L G+ELL++SF LAAV+++C+ SPIF+VSWA QV A A G LQY Q +++L SLH S Sbjct: 639 SILPRWVHNTIWYTQRGGILTVAVLILSHVVSFLVCLVGLVLAFMLAIFLMILQLHKYAVREALSNYNVAFCFVFPFNFQFLVSLVKEWAPHWAPVCLWYSFLIQLLCTRGKSSAPSTAGSDVTVGNTASGGMSSQANGTTTNATGGGGAVPSRGTSGGMVSVFRIVLPLAFVAEGVSGRTALLDLNGAELLVVSFLLAAVKMQCISSPIFMVSWAIQVLATAATGFHPVLQYCQFVLALTSLHICS 885
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: A0A225VDK5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VDK5_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.690e-25 Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 2 Query: 1646 LRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVD 2125 +R+H V+ + H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ S+ +V R +LP+ FL E S S+LL L G+ELLL SF ++AV+ + SPIFL+S A+Q GS +Q+ QL ++L SLH ++ D Sbjct: 898 IRIHRVSFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------STAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFLLSLATQCLLAVFLGSELLVQWLQLALALYSLHIMAATD 1050
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: A0A8J5M5U0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M5U0_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.800e-25 Identity = 65/160 (40.62%), Postives = 94/160 (58.75%), Query Frame = 2 Query: 1646 LRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVD 2125 +R+H VA + H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ + +V R +LP+ FL E S S+LL L G+ELLL SF ++AV+ + SPIF +S A+Q GS +Q+ QL ++L SLH +++ D Sbjct: 405 IRVHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFFLSLATQCLLAVFLGSELLVQWLQLALALYSLHVMAVTD 557
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: H3GEN9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEN9_PHYRM) HSP 1 Score: 120 bits (300), Expect = 9.220e-25 Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 1646 LRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVD 2125 +R+H VA + H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ + +V R +LP+ FL E S S+LL L G+ELLL SF ++A++ + SPIF +S A+Q GS +Q+ QL ++L SLH ++ D Sbjct: 297 IRIHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLTSFIISALKTSNLCSPIFFLSLATQCLLAVFLGSELVVQWLQLALALYSLHVMATTD 449
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: A0A329SLB6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SLB6_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.520e-24 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 1598 VLSVLITSTSWLFLLGLRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVD 2125 VL + + + SW +R+H VA + H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ + +V R +LP+ FL E S S+LL L G+ELLL SF ++AV+ + SPIF +S A+Q GS +Q+ QL ++L SLH +++ D Sbjct: 875 VLLLALHAASWF----IRVHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFFLSLATQCLLAVFLGSELLVQWLQLALALYSLHVMAVTD 1039
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: D0NS48_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NS48_PHYIT) HSP 1 Score: 121 bits (304), Expect = 1.990e-24 Identity = 64/160 (40.00%), Postives = 95/160 (59.38%), Query Frame = 2 Query: 1646 LRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVD 2125 +R+H VA + H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCT+ + +V R +LP+ FL E S S+LL L G+ELLL SF ++AV+ + SPIF +S A+Q + GS +Q+ QL ++L SLH +++ + Sbjct: 884 IRIHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFFLSLATQCLLAVSLGSELLVQWLQLALALYSLHVMAVTE 1036
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Match: A0A2P4XNX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XNX8_9STRA) HSP 1 Score: 120 bits (302), Expect = 3.550e-24 Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 2 Query: 1580 AFFVVSVLSVLITSTSWLFLLGLRLHSVALKEATGSVHVAVCFLFPYCFQYLVSAIDNWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFALAAVRLRCVFSPIFLVSWASQVFALATCGSSGSLQYGQLLVSLASLHAVSMVD 2125 AF VV +LS+ + S W +R+H VA + H+ CF F Y F +LV + WAP W P CLWY+FL+Q+FCTS + +V R +LP+ FL E S S+LL L G+ELLL SF ++A++ + SPIF +S A+Q GS +Q+ QL ++L SLH ++ D Sbjct: 902 AFSVVLLLSLHVAS--WF----IRIHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTSGPKA-------MVTTFRIILPLVFLVEGISHHSFLLDLNGAELLLTSFIISALKTSNLCSPIFFLSLATQCLLAVFLGSELLVQWLQLALALYSLHVMAATD 1070 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7714.16658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7714.16658.1 >prot_L-elsbetiae_contig7714.16658.1 ID=prot_L-elsbetiae_contig7714.16658.1|Name=mRNA_L-elsbetiae_contig7714.16658.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=734bp MAKEFTPSAGSAIEAHAGGAHPRTLRSASETSNRVFSAAVGSEVKTAALEback to top mRNA from alignment at L-elsbetiae_contig7714:407..8456+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7714.16658.1 ID=mRNA_L-elsbetiae_contig7714.16658.1|Name=mRNA_L-elsbetiae_contig7714.16658.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8050bp|location=Sequence derived from alignment at L-elsbetiae_contig7714:407..8456+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7714:407..8456+ >mRNA_L-elsbetiae_contig7714.16658.1 ID=mRNA_L-elsbetiae_contig7714.16658.1|Name=mRNA_L-elsbetiae_contig7714.16658.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4404bp|location=Sequence derived from alignment at L-elsbetiae_contig7714:407..8456+ (Laminarionema elsbetiae ELsaHSoW15)back to top |