mRNA_L-elsbetiae_contig7691.16626.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7691.16626.1
Unique NamemRNA_L-elsbetiae_contig7691.16626.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7691.16626.1 vs. uniprot
Match: D7FNU2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU2_ECTSI)

HSP 1 Score: 487 bits (1253), Expect = 3.650e-161
Identity = 272/366 (74.32%), Postives = 296/366 (80.87%), Query Frame = 2 
Query:  518 MRSASELEAVLSE-------------------VGAHDPEDTKARVAKEMLSAVKAACEACVRQEKEERDGIRAQIQQAKDDIIMLSRKLGIPTPADGAPTESFFYCNQVMDTLFDRLVNLETTRDTLRTQQADRGRAVDSILKEMETINENMDRQPEARKQKKYPNTRTREGESEESGGAGWESKGGWELSEERLEKLRGRLATLRVLKFERATEMVGLVVDCQKLFRELAPPVEHPLQNKMLMSLDPSSPADKPSLRTEAQTQTSVGLSIFSVDRLKKLREDMREDRELHTERKADHRRQIESLWEKLSVPERHRQEHLGKTKGITHSDMDELEAELARLRKLKAEKLTDMLKASRVEVAGLLEV 1558
            MRSA+ELE +LSE                   VGAHD E  + RV  E+LSAV+ ACEACVRQEKEERD I A IQQAKDDII LSR LGIPTP +G PTE+FFYCNQV+DT FDRLVNLETT D+LRTQQ DRGRAV+SI+KEMETINENMDR+PE             +GE EESGG  W  K GWELSEERLE LRGRLATLRVLK ERA EM+GLVVDCQKLFREL PPVE+PLQNKMLMSLDPS P DKP+LRTEAQTQTSVGLS+F+V RLKKLREDMREDRELHT+RK +HR QIESLWEKLSVPER RQEHL  TKGITHSDMDELE+ELARLRKLKAEKLTDMLKA+R E++ LLEV
Sbjct:    1 MRSAAELETILSELALGLKRCWAANTALLTSKVGAHDAEGARTRVVNEVLSAVRGACEACVRQEKEERDTILANIQQAKDDIIELSRNLGIPTPGEGEPTETFFYCNQVLDTHFDRLVNLETTLDSLRTQQGDRGRAVESIVKEMETINENMDRKPE-------------DGEFEESGGPEWAGKEGWELSEERLETLRGRLATLRVLKLERAAEMIGLVVDCQKLFRELGPPVENPLQNKMLMSLDPSCPVDKPALRTEAQTQTSVGLSVFNVHRLKKLREDMREDRELHTQRKKEHRLQIESLWEKLSVPERTRQEHLAATKGITHSDMDELESELARLRKLKAEKLTDMLKAAREEISDLLEV 353
[Close]
BLAST of mRNA_L-elsbetiae_contig7691.16626.1 vs. uniprot
Match: A0A6H5KWV4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV4_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.150e-52
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 2 
Query: 1184 MLMSLDPSSPADKPSLRTEAQTQTSVGLSIFSVDRLKKLREDMREDRELHTERKADHRRQIESLWEKLSVPERHRQEHLGKTKGITHSDMDELEAELARLRKLKAEKLTDMLKASRVEVAGLLE 1555
            MLMSLDPS P DKP+LRTEAQTQTSVGLS+F+V RLKKLREDMREDRELHT+RK +HR QIESLWEKLSVPER RQEHL  TKGITHSDMDELE+ELARLRKLKAEKLTDMLKA+R E++ LLE
Sbjct:    1 MLMSLDPSCPVDKPALRTEAQTQTSVGLSVFNVHRLKKLREDMREDRELHTQRKKEHRLQIESLWEKLSVPERTRQEHLAATKGITHSDMDELESELARLRKLKAEKLTDMLKAAREEISDLLE 124
[Close]
BLAST of mRNA_L-elsbetiae_contig7691.16626.1 vs. uniprot
Match: D8LRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRS3_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.080e-7
Identity = 83/349 (23.78%), Postives = 146/349 (41.83%), Query Frame = 2 
Query:  503 VLKLTMRSASELEAVLSEVGAHDPEDTKARVAKEMLSAVKAACEACVRQEKEERDGIRAQIQQAKDDIIMLSRKLGIPTPADGAPTESFFYCNQVMDTLFDRLVNLETTRDTLRTQQADRGRAVDSILKEMETINENMDRQPEARKQKKYPNTRTREGESEESGGAGWESKGGWELSEERLEKLRGRLATLRVLKFERATEMVGLVVDCQKLFRELAPPVEHPLQNKMLMSLDPSSPADKPSLRTEAQTQTSVGLSIFSVDRLKKLREDMREDRELHTERKADHRRQIESLWEKLSVPERHRQEHLGKTKGITHSDMDELEAELARLRKLKAEKLTDMLKASRVEVAGL 1549
            +++L  ++ S LE +  EVG    E  K R  + ++   +  CE   +QE+  +      I  AKD I    +KLG     D +  +          +L D+L   E   D ++     +    + + +E+  ++  +                   G+  ++  A W       L+ ERL+  + +   L     +R   +  LV   Q L  EL  P    L N++L SL   S    P L+T  +T +SVG+   ++D L    E++   R    E+      +I  LW++L + +  +        G+    ++  E EL RLRKLK EK+ +++ ASR ++  L
Sbjct:   15 IVELAKQTTSRLEVLWDEVGYTSEE--KRRQMQGLVDGFQTLCENKEKQEEGVKSQFVTSIADAKDRIKTARKKLGQEHTEDSSTDDM---------SLTDQLAYYEMEADAIKKMCKAQQEKFEKLSEELVHMSMVL-------------------GDDSDADLAEWRDLES-SLTNERLQAFKDKKTELNKATEDRMQTVASLVSTVQDLMEELKIPAATALDNRILGSLAIPSSTGVPVLQTTERTASSVGIDRAALDELAAKHEELITQRNTRREKLEKMGEEILDLWQQLDIGKDEQDVFAKSVDGMGLQTLEAGETELNRLRKLKLEKMGELVLASRAKIREL 332
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7691.16626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNU2_ECTSI3.650e-16174.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWV4_9PHAE1.150e-5284.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LRS3_ECTSI1.080e-723.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7691contigL-elsbetiae_contig7691:1302..8913 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score497.3
Seed ortholog evalue7.8e-138
Seed eggNOG ortholog2880.D7FNU2
KEGG koko:K16732
Hectar predicted targeting categoryother localisation
EggNOG free text desc.microtubule binding
EggNOG OGsKOG4302@1,KOG4302@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Ec32 ortholog descriptionMicrotubule-associated protein, MAP65/Ase1/PRC1
Ec32 orthologEc-12_003360.3
Exons9
Model size1558
Cds size1380
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7691.16626.1prot_L-elsbetiae_contig7691.16626.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7691 1302..8735 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816854.115216-CDS-L-elsbetiae_contig7691:1301..14481622816854.115216-CDS-L-elsbetiae_contig7691:1301..1448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 1302..1448 -
1691683863.3169937-CDS-L-elsbetiae_contig7691:1301..14481691683863.3169937-CDS-L-elsbetiae_contig7691:1301..1448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 1302..1448 -
1622816854.1253746-CDS-L-elsbetiae_contig7691:1945..20411622816854.1253746-CDS-L-elsbetiae_contig7691:1945..2041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 1946..2041 -
1691683863.3286717-CDS-L-elsbetiae_contig7691:1945..20411691683863.3286717-CDS-L-elsbetiae_contig7691:1945..2041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 1946..2041 -
1622816854.135335-CDS-L-elsbetiae_contig7691:2513..26451622816854.135335-CDS-L-elsbetiae_contig7691:2513..2645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 2514..2645 -
1691683863.3406665-CDS-L-elsbetiae_contig7691:2513..26451691683863.3406665-CDS-L-elsbetiae_contig7691:2513..2645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 2514..2645 -
1622816854.146362-CDS-L-elsbetiae_contig7691:3568..37811622816854.146362-CDS-L-elsbetiae_contig7691:3568..3781Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 3569..3781 -
1691683863.354229-CDS-L-elsbetiae_contig7691:3568..37811691683863.354229-CDS-L-elsbetiae_contig7691:3568..3781Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 3569..3781 -
1622816854.1632805-CDS-L-elsbetiae_contig7691:4186..43691622816854.1632805-CDS-L-elsbetiae_contig7691:4186..4369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 4187..4369 -
1691683863.365432-CDS-L-elsbetiae_contig7691:4186..43691691683863.365432-CDS-L-elsbetiae_contig7691:4186..4369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 4187..4369 -
1622816854.1782827-CDS-L-elsbetiae_contig7691:5452..55421622816854.1782827-CDS-L-elsbetiae_contig7691:5452..5542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 5453..5542 -
1691683863.3754134-CDS-L-elsbetiae_contig7691:5452..55421691683863.3754134-CDS-L-elsbetiae_contig7691:5452..5542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 5453..5542 -
1622816854.1883774-CDS-L-elsbetiae_contig7691:6373..65141622816854.1883774-CDS-L-elsbetiae_contig7691:6373..6514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 6374..6514 -
1691683863.3869066-CDS-L-elsbetiae_contig7691:6373..65141691683863.3869066-CDS-L-elsbetiae_contig7691:6373..6514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 6374..6514 -
1622816854.1983573-CDS-L-elsbetiae_contig7691:7376..75261622816854.1983573-CDS-L-elsbetiae_contig7691:7376..7526Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 7377..7526 -
1691683863.3989732-CDS-L-elsbetiae_contig7691:7376..75261691683863.3989732-CDS-L-elsbetiae_contig7691:7376..7526Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 7377..7526 -
1622816854.2083004-CDS-L-elsbetiae_contig7691:8507..87351622816854.2083004-CDS-L-elsbetiae_contig7691:8507..8735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 8508..8735 -
1691683863.4100668-CDS-L-elsbetiae_contig7691:8507..87351691683863.4100668-CDS-L-elsbetiae_contig7691:8507..8735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7691 8508..8735 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816854.2180533-UTR-L-elsbetiae_contig7691:8735..89131622816854.2180533-UTR-L-elsbetiae_contig7691:8735..8913Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7691 8736..8913 -
1691683863.4192126-UTR-L-elsbetiae_contig7691:8735..89131691683863.4192126-UTR-L-elsbetiae_contig7691:8735..8913Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7691 8736..8913 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7691.16626.1

>prot_L-elsbetiae_contig7691.16626.1 ID=prot_L-elsbetiae_contig7691.16626.1|Name=mRNA_L-elsbetiae_contig7691.16626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=460bp
MNRISLPQHHPAGGGTKSSTGQGRTGSQSTAASVGTRFESVGAGSITAVA
DGCRDGQQRLSAWMPEKLSGCRQWLEAKDASNSRASSMSVASGALAAGGD
LPDYFAREVLKLTMRSASELEAVLSEVGAHDPEDTKARVAKEMLSAVKAA
CEACVRQEKEERDGIRAQIQQAKDDIIMLSRKLGIPTPADGAPTESFFYC
NQVMDTLFDRLVNLETTRDTLRTQQADRGRAVDSILKEMETINENMDRQP
EARKQKKYPNTRTREGESEESGGAGWESKGGWELSEERLEKLRGRLATLR
VLKFERATEMVGLVVDCQKLFRELAPPVEHPLQNKMLMSLDPSSPADKPS
LRTEAQTQTSVGLSIFSVDRLKKLREDMREDRELHTERKADHRRQIESLW
EKLSVPERHRQEHLGKTKGITHSDMDELEAELARLRKLKAEKLTDMLKAS
RVEVAGLLEV
back to top

mRNA from alignment at L-elsbetiae_contig7691:1302..8913-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7691.16626.1 ID=mRNA_L-elsbetiae_contig7691.16626.1|Name=mRNA_L-elsbetiae_contig7691.16626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7612bp|location=Sequence derived from alignment at L-elsbetiae_contig7691:1302..8913- (Laminarionema elsbetiae ELsaHSoW15)
GTGTACTACGACACAGCGCCGGGCAGGCAGGAGTGCCGATATCGACATTT
AGAGCTGGAAACGGTGGGTTCTGGCCCTTTTTACCAGACAGTCGCGAGGT
GTCTGCGGAGAATCAAGAAACCAGCGAGAGCGAGGGAATTTTTCACACAC
AAACCGCACTCCAACGGCCATAACCAAAATGAACCGGATCAGCCTCCCTC
AGCACCACCCTGCTGGCGGCGGGACCAAGAGCAGCACTGGCCAAGGACGA
ACGGGGTCTCAATCCACTGCAGCATCGGTTGGAACGCGTTTCGAGTCCGT
GGGGGCTGGAAGTATTACTGCTGTTGCCGATGGTTGTCGCGATGGGCAGC
AGAGGCTATCGGCTTGGATGCCAGAAAAGCTCTCTGGGTGCCGGCAGTGG
CTCGAGGTAAGGAGGAGGACGCACATGTACCACATATCACACGCTGGCGT
GGGGGTGCGCAAAGCAGCAACAGCCTCGACGTATGATGCTGTTTTTCACT
CTGTGTAGTTTGTCTTGAGCGGGGGCGCGCTCGCTATATTGCCACGACAA
GTGCGAACGGGAAACGAGGAACCAAGGATTCCGGGCACATCCGATTATGT
TCGATATTTATGCAGACTAAAATAGTCCAATGTACTCAGAGCGACACCAA
GCGCGTGATGCGCCGAGGGGGGGGTAAGACATGGAAGAACAACGACTTTG
GAACAACAGCAGACGCGCGATATATTGTTAATAGGAGGAACCGCCAACAT
TGGCGGGGTGGTAGAGTTTTCAGGTAGCACCTCGCGCGCGTATGTATGTA
CATTTGTGTGCGACTGCCAAATAGACGTTGGCACACGTTTCATGTGTTCC
AAGTCCCAAGGTTCATCGATGTTACGTAGTCTACGTTGTATCTACACAGA
GGTACATATGTACCTAGGGTATGCGTCCTCTTTTTTGTCGTCTCGCCGCC
GCTGTACTTGGTTGGGCCCTTTATCGTTCTCTGCATGTGTGGCACGAAAA
AAACTACTGGACTTGGTTGCCCTTCATAGTTGTCTGCATGTTGTAGTTTG
TTGTTATTGTTGTTGTTGTTGTTGTTGTTGTTATCTCCACATTAAAAATC
GTTCCGAACTCTCTATCCAGTACACCTCCATGAGTCTGTACTATCCAACA
ATGACGCGGTCGATTCCCGTGGTCACAGGATAACTTACTACCCTCAAGAG
GCTTACTGCTGTGTGGCACGAAAAAATCCATTAAGCAGTCTACATACCGC
CGTGCTACGGTTATTCCACATAAATGTTGAAGGGCCTAGAATATTTTCAT
CTCTTCTTGTAAGCACAACCCGCATCCCGTATTTGTACCTACCCTCACTC
GCGTTGGTTAACTCGCTTTTTTCACCGCCCCTTCCAGGCAAAGGACGCGT
CTAACAGCCGGGCATCTTCCATGAGTGTGGCGTCGGGTGCGCTAGCGGCG
GGGGGTGACCTGCCAGACTACTTCGCCAGAGAGGTGCTCAAGTTAACCAT
GCGGTCGGCTTCGGAGCTTGAAGCCGTACTTTCCGAGGTGAGCACTCCAT
GCACTCCCGCGGCGACTATTGTGTACATATAGAGCCGCGGTGCGCCAAGT
TGGTACTGAGTTGCATGCCGTAGCGGAGAGGGAGGGGTGGTGGATGCACG
CACACGTGTCTGCAATGTGGTATTTCTTGGACCATAAATCTCGCACCCGT
AGCTCTGTATAGGGGCGGCGCGAGAGGGAAGGAGGGTTCTGCTTTTTAAG
CAATGGAAAACTCCACAGTGAATTGTGAAGTTTTTTTTATGCAGTCAAGA
CACACAACGCCTGAGTTGCCCGAGGCATGATTAATTCGTTATTTTGGTGC
GACCGCTGCGAATAACTCGGGGATACGGGGTGGTCCGGAGGAAACAGCTT
TTTTCACAAACTCGAACGCGTTCTCAGGGTATGTATAGGATAGACACCTG
CGGCGGCGTGGTGTACGTGGTGTGCTCTACGCGCAATTTATTGTAGACGC
TTGCTTGGCCGAGCGGGGAGCGTTGTGCTCGCACGCACCCCGCCCTCACC
GCTGCCAGGGTCTGACCTCATGATTCTGGGATGATCGAGCCGCTGATGCC
TGCTCGGTGCTAGATAAATACGGATGGAACTACTGCTGTGCCTCCTGGCG
CTGCGTAGCATGCCGCTGGAACTCCCATCTGCTGGGGGGCAGTTGGTGGG
TGCGGTTGTATAGCATCCCCGGGACACGGCGCAACCGAGGCCTACGCGGC
TAGCCCTCGGGTCGTTGGCGCAGCAGATATGTATGTACATTTGTATCTAT
GTACGCTAGGCTGGCAGGAAATGGCCAAGAAAACAGCAAGGGTCCTGCTG
TTGTAACGGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCGGCTGTAGG
TTGGAGCCCACGACCCCGAGGACACCAAGGCGCGGGTGGCGAAGGAGATG
CTCTCGGCGGTGAAGGCGGCGTGCGAGGCGTGCGTGAGGCAGGAGAAGGA
GGAGAGGGACGGCATCCGGGCACAGATCCAACAGGCCAAGGTGCGCGCCC
TGTCTGTCACACGAGAGAGAGGAAGAGAGAGAGAGAGAGAGAGAGAGAAG
AGAGAGGAAGAGAGAGAAGAGAGAGAGAGAGAGCGAGAGCGAGAGGGAGC
GGCGCGATGCCAAGACTAAGTTGTATTGGCTTGTCGTTCGCACCCTCCTA
TTTATTGGGCAATTTCAATGCGTTCTGTGGTACGACGGAGAATAGACGAA
TATACTGGTCGGTATCCATGTTTGTAGCACCATGCAAGGTGGGTTATCGG
GCGGGGGGGGGTCGGGGGGGTTCGTCTCGAGCGCCCCCGACACGGCAGTT
ATAACTTTGCAGGCTTGATGGTCGGAGAAGACGTGTCCGGGGTCTTGAGG
GGGCGACCATACATACATGCTTACATAAGTACTGCTGTGCTTCGCAGATG
CCGTAGATGCCCAAGATCCAGCCATCGCTATCACCGTCCGCCTTGGCCGA
GGGCGTTAGCAGCGGTAGTAGTACGTAGCGCAACCCCTCGCGAGCATTGG
TTGCATTTGCGCCCTTCTCAGAGGGCTGGCTGGCTGGCTGCTCGAAAGAA
GCCATGCCACGCTCGCGGTATTTTGATGCCAGCCACTTGACCTCCGACTC
GCTCTTGCCCATTCTTCCCCGCGCGCCACATACATACGGAACCGCCCAAT
CGATTTTCCGACGCTTTGAAAAAAAATGCGGGGTTGGGGTCGGTGTGTGC
CGTGATGCTGACGACGGCGACGATTGCTCTCCCACGGATACACACCCCTA
CGCGATCTTCCGGGCGCACGACAACGCCCCGCCACGCCGCGCCACGCCGC
GGCCATTTCTGCGCGAGGCAGGACGACATCATCATGCTCAGCCGCAAGCT
GGGCATCCCTACGCCCGCCGACGGCGCGCCGACCGAGTCGTTCTTCTACT
GCAACCAAGTGGTAAGCCTGGAAACAATCTACGGTAATAGTTATGGCGTA
TGTATGTTACTCGTGACCGACGGACGGGCCTGACCGGCATGATTTCGCTC
GTGTTCGTACATATAAAGGTTTGCATGTAAATAGATACGTATCTAACCGT
ATACTACACAAGATAACACACCCCCTGGACCGATTTTCAAAGCTCGAAAG
CTCCGCAACGAGTGTGGCTATAATACCAAACGACACGTTTTTCGAACAGC
TCTTGATTTGATCTTTCCAACGCCGCCCTCTTCGGGACTGACACCTCTTG
TCGCTGTGGAGTACTTGAGCTTTGAAAATCGGTCCAGGGGGTGTGTTATC
CTGTGTGTCGTATACGTTACATGTATAAATATTCCTATGTATGTACATAT
ACATGCTTTTCGTTTAGCTTGTTTTCCTCTTCGGTTTCTTTGATTGGTTT
TGTTTTTATATTTTCTCCTTTTTTTGTACATAACCGGTTTTTTTGTTTTG
TTTTTGGGGGGGGGGGGGGGGGGGGGGAGGGCGATGACAGAAGCTAATGT
TTTAGTCGGGTCGGGTGGAAGCAAGGCTGGCCGCCGCGATTTACCCTGAT
TTGCCCGTTCGTCGATCGCATCGGCTGGCTGTACACGTGTAAATATGTTC
CTGCGACAAGGGCTGGAACGGAGTAGTGCGCGCGTGTGTGCACGCGGCGA
AATTGCGGGCTTGGTCGGACCCTCTTTTTATGCCGCTCTGTCGGCCGGTT
CCTGTTTTTTTTCAGCAGATGATGGAAGTGGGTTGGTTGTATCTGGAAAT
GATGTGGGGTAAATACATAAATTCACGCCGGAGGATGGGCTGGGCTTGTT
GTTGTTTCGTGAACCGCCCCCCCTTCGAGTTGGGTCCGCTTCTCCGACTC
CGAACCCGCGTCGTGACTTCTTGCGAAGATTTGTGTTTGTTTCGGTTCAG
CTGTAACCGTAGCCACACCCGGTTACTAACTGCTCTCCTGCCCCATGTTT
TTTTTGCGCAGTTTGGCCACATCCCCGCCCTCGCCCTCCTTCTTTTCTCG
TGCCCCCCCGTCCTCTTTTGTCGTCGCGCGAACGAAAAAAACAGATGGAC
ACCCTCTTCGACCGCCTTGTCAATCTGGAGACGACGCGCGACACCCTGAG
GACGCAGCAGGCGGACCGCGGCAGGGCCGTCGACAGCATCCTCAAGGAGA
TGGAGACCATCAACGAGAACATGGACCGCCAACCGGAGGCAAGAAAACAA
AAAAAATATCCAAACACACGAACACGCGTAGCGGCGGGGCGGGTGCGCGC
GCGCACACATACACACACACACACACACACAGCTTTTAAGCCAAAAAATA
ATCCAATACACAAACATACATACACGTGCGCGCGCACACCCACATAGACA
CGCACACAGCTTTAATTAGTCTGCTGCTTCCGTTTGGGGAAGGGTCGGGG
GAGGGGGGGGGAGGGGGGTTAACAGCTCTGGGTAGGGTAAACCGCGGAGA
CGGACAAGTTGGGGGGCTCTGTGTTTATTCGTGTTTTCCCTCATGGGAGG
GGGGGGGGGTACAGACAGGGATTTTTACGGGCCTCTTGGACCGAGGGATT
TTTCTCTCTGTCAGCCGGTTAGGACGGTCTCAAATTAACAAACCATCAAA
CATGCACGCACCCACCATCGTGGCTCACTCAGGAAGGGGAGTCCGAGGAA
TCCGGGGGCGCGGGGTGGGAAAGCAAGGGAGGCTGGGAGCTCTCGGAGGA
GCGGTTGGAGAAGCTGAGGGGGCGTCTGGCGACGCTGCGCGTGCTCAAGT
TCGAGAGGGCGACCGAGATGGTCGGCCTGGTGGTGGACTGCCAGAAGCTG
TTCCGGGAGCTGGCGCCGCCGGTGGAGCACCCTCTGCAGAACAAGGTGCC
TAATTATTATGCATGTAAATTATTTACTGCAGTACAGTGGCATAGTCTTT
GATAATGCGAAGTTTGTTGATCACGGGGGGTTGGGGTTGTCGTCTGAAGA
GAGGAGGTGCGCGACGCCGTTTTTTTTTAGCTCTAAATTTAGCGTGCGGT
GCCCGCGGCATGACTGCCTGCCTGCCTGCCTGCTGTGTGCGTCTGGTGCA
TAGTGTTTGGTGGGATGGGAACGCCTCTCTCCGCCCGCCCCAAATTTCAC
ACACATTTGATGCCTTTTTTTTATTAGAGGACCTCGGAGCCTCTCCTCGC
TTCCGTCCTTTCACCCCGTGCATGGGCTAGTAGTGCTGATGCAGGTATGT
ACACAGTGGTAGGTCGTGGCTTCGTGTTGCAGCATTCGTCTTTGTTTTCG
CACTCCCCACCTTTTGTATTTCTTTCCGCAGTGCCCCCCCCCCCCCCCCC
CCCCCAACTCTCACCACCCCAACGCTGGGAAAAAAGGTTGGTGGAGGTGT
GGTTGTGCCCGAGTNNNNNNNNNNGGTGGGGTGTGGGTTCGGGTTGAAGC
TTTCTTTTTTTTTTTCCCCCCCCCCCCCTTTTTTTTTTTTTTCCCCCGGG
CCCCCCCCCCCCCCCCCAAATATGTATGGGACCACTATTGTAGCGAATGT
ATGTATGTATGTATGTGCCTAGAGCAAGAGTGGAGGCGGAGGGCACTGGC
CAAGGGCTCACACCCCCCCCATCTAACCTCGCGTGCATCCTCCAAAAGAC
GGCGCACCGACTGAAGTTTCAAGACATCGTCGGCTGAACACTGCTCTCTG
TCTGTCTGTCTGTCTGTCTATCTGTCTGTCTGTCTGTCTGCCTGTCTGTC
TATCTTTCTGCCTGCCTGTCTGTCTGTCTGTCGGTGTGTGCGTGCGTGCG
TGCGGCGGCTGTCTGCAGATGCTCATGTCCCTGGATCCGTCGTCGCCGGC
GGACAAGCCGTCTCTTAGGACGGAGGCCCAGACGCAGACGAGCGTCGGGC
TCAGCATCTTCAGCGTGGACCGGCTGAAGAAGCTCCGGGAGGACATGCGG
GTGGGTACAATACACGCTTCCTTTCCGCCTGCGTGCTGCCCGCTGTATAC
TGCTGTCTTGCTGTGTAGCGGGGAGGGGGGTGGGAAATGGTGTTATGTAC
AATAAATAGCCATTCTGTTGTGCCGCCGAACGGTTTTTTGTTTTGTGTGC
GCTTGTTGCACAGGCGTTACGTAAGTTTAGCGAGGAGACGAGAAGGAGAT
GAAGAGTCTTGAAAGCTCTCTTTCGACGAGGTTTCCTGGCCTGAACGAGG
TTGCCTCGAAATACCTAAAACAATAAACAGCAAAACACTGGTGGTCTGTG
TTGCGTCGCGATCTTCCGCTCGTCTGTCTGTTGCCCCGGCGACCGAACAA
GTGTCGTTTCTTCAGACCGGGTTCGTTTTTAAGACGACAAGGCCCCAAAC
TAACGCGCGCCACGCTTGCTGCTGCTGTTGCTGTTGCTGCTGCTGCTGGT
GGTGGTGGTTTGGACCCGATAGGAGGACCGCGAGCTGCACACGGAGCGGA
AGGCTGACCACAGGCGGCAGATCGAGAGCCTGTGGGAAAAGCTCAGCGTG
CCGGAGCGGCACCGCCAGGTGCAAAATCCACCCACAATAAATATATACTA
CCACCTCTTTGTAGATTTTTAAAGGAAGGCTAAGGCTTGCTTTTGACAGG
GCCAACAATAACGGCGAACCTGCTGTGTACCTCTTGCGGATATGTAAAGA
GAAGCTTGCTCTGGACAGGGCGAAAACAAGCAGCAACGCGTCTTTTGTTG
CGCTCCGCAGAGGATTGTTCCTTTCGCGGGCATGCTTGCCCCGGGCGTTT
TCATGCATATTTACGTATGCACGCGTTGTATTTTATTGCATGGTAGTATT
TTTTACGCTTTGCCCCCGCCCACCCACTCACTGTTGCGGAACAACACACA
GCGGCGCGTTTTTTTGTTCCGCGGAGAACGTTTTTCCTTTCGCGATTGTG
CTTGTGCTTGGCCCCGGGCTGCATACGTACGCGTGTTTTTGGCATTTTTT
TGACGCGTTGCTTCACCCACACACCCACGCGCCCATTTGGGTGTGCGTGC
GTGCGTGTGCAACAGGAGCACCTGGGGAAGACGAAGGGGATCACGCACTC
GGACATGGACGAGCTGGAGGCGGAGCTAGCGCGGCTGAGGAAGCTCAAGG
CGGAGAAGCTGACGGACATGCTCAAGGCCTCCAGGGTGGAGGTCGCGGGG
TTGTTAGAGGTG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7691:1302..8913-

>mRNA_L-elsbetiae_contig7691.16626.1 ID=mRNA_L-elsbetiae_contig7691.16626.1|Name=mRNA_L-elsbetiae_contig7691.16626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2760bp|location=Sequence derived from alignment at L-elsbetiae_contig7691:1302..8913- (Laminarionema elsbetiae ELsaHSoW15)
ATGAACCGGATCAGCCTCCCTCAGCACCACCCTGCTGGCGGCGGGACCAA
GAGCAGCACTGGCCAAGGACGAACGGGGTCTCAATCCACTGCAGCATCGG
TTGGAACGCGTTTCGAGTCCGTGGGGGCTGGAAGTATTACTGCTGTTGCC
GATGGTTGTCGCGATGGGCAGCAGAGGCTATCGGCTTGGATGCCAGAAAA
GCTCTCTGGGTGCCGGCAGTGGCTCGAGATGAACCGGATCAGCCTCCCTC
AGCACCACCCTGCTGGCGGCGGGACCAAGAGCAGCACTGGCCAAGGACGA
ACGGGGTCTCAATCCACTGCAGCATCGGTTGGAACGCGTTTCGAGTCCGT
GGGGGCTGGAAGTATTACTGCTGTTGCCGATGGTTGTCGCGATGGGCAGC
AGAGGCTATCGGCTTGGATGCCAGAAAAGCTCTCTGGGTGCCGGCAGTGG
CTCGAGGCAAAGGACGCGTCTAACAGCCGGGCATCTTCCATGAGTGTGGC
GTCGGGTGCGCTAGCGGCGGGGGGTGACCTGCCAGACTACTTCGCCAGAG
AGGTGCTCAAGTTAACCATGCGGTCGGCTTCGGAGCTTGAAGCCGTACTT
TCCGAGGCAAAGGACGCGTCTAACAGCCGGGCATCTTCCATGAGTGTGGC
GTCGGGTGCGCTAGCGGCGGGGGGTGACCTGCCAGACTACTTCGCCAGAG
AGGTGCTCAAGTTAACCATGCGGTCGGCTTCGGAGCTTGAAGCCGTACTT
TCCGAGGTTGGAGCCCACGACCCCGAGGACACCAAGGCGCGGGTGGCGAA
GGAGATGCTCTCGGCGGTGAAGGCGGCGTGCGAGGCGTGCGTGAGGCAGG
AGAAGGAGGAGAGGGACGGCATCCGGGCACAGATCCAACAGGCCAAGGTT
GGAGCCCACGACCCCGAGGACACCAAGGCGCGGGTGGCGAAGGAGATGCT
CTCGGCGGTGAAGGCGGCGTGCGAGGCGTGCGTGAGGCAGGAGAAGGAGG
AGAGGGACGGCATCCGGGCACAGATCCAACAGGCCAAGGACGACATCATC
ATGCTCAGCCGCAAGCTGGGCATCCCTACGCCCGCCGACGGCGCGCCGAC
CGAGTCGTTCTTCTACTGCAACCAAGTGGACGACATCATCATGCTCAGCC
GCAAGCTGGGCATCCCTACGCCCGCCGACGGCGCGCCGACCGAGTCGTTC
TTCTACTGCAACCAAGTGATGGACACCCTCTTCGACCGCCTTGTCAATCT
GGAGACGACGCGCGACACCCTGAGGACGCAGCAGGCGGACCGCGGCAGGG
CCGTCGACAGCATCCTCAAGGAGATGGAGACCATCAACGAGAACATGGAC
CGCCAACCGGAGGCAAGAAAACAAAAAAAATATCCAAACACACGAACACG
CATGGACACCCTCTTCGACCGCCTTGTCAATCTGGAGACGACGCGCGACA
CCCTGAGGACGCAGCAGGCGGACCGCGGCAGGGCCGTCGACAGCATCCTC
AAGGAGATGGAGACCATCAACGAGAACATGGACCGCCAACCGGAGGCAAG
AAAACAAAAAAAATATCCAAACACACGAACACGCGAAGGGGAGTCCGAGG
AATCCGGGGGCGCGGGGTGGGAAAGCAAGGGAGGCTGGGAGCTCTCGGAG
GAGCGGTTGGAGAAGCTGAGGGGGCGTCTGGCGACGCTGCGCGTGCTCAA
GTTCGAGAGGGCGACCGAGATGGTCGGCCTGGTGGTGGACTGCCAGAAGC
TGTTCCGGGAGCTGGCGCCGCCGGTGGAGCACCCTCTGCAGAACAAGGAA
GGGGAGTCCGAGGAATCCGGGGGCGCGGGGTGGGAAAGCAAGGGAGGCTG
GGAGCTCTCGGAGGAGCGGTTGGAGAAGCTGAGGGGGCGTCTGGCGACGC
TGCGCGTGCTCAAGTTCGAGAGGGCGACCGAGATGGTCGGCCTGGTGGTG
GACTGCCAGAAGCTGTTCCGGGAGCTGGCGCCGCCGGTGGAGCACCCTCT
GCAGAACAAGATGCTCATGTCCCTGGATCCGTCGTCGCCGGCGGACAAGC
CGTCTCTTAGGACGGAGGCCCAGACGCAGACGAGCGTCGGGCTCAGCATC
TTCAGCGTGGACCGGCTGAAGAAGCTCCGGGAGGACATGCGGATGCTCAT
GTCCCTGGATCCGTCGTCGCCGGCGGACAAGCCGTCTCTTAGGACGGAGG
CCCAGACGCAGACGAGCGTCGGGCTCAGCATCTTCAGCGTGGACCGGCTG
AAGAAGCTCCGGGAGGACATGCGGGAGGACCGCGAGCTGCACACGGAGCG
GAAGGCTGACCACAGGCGGCAGATCGAGAGCCTGTGGGAAAAGCTCAGCG
TGCCGGAGCGGCACCGCCAGGAGGACCGCGAGCTGCACACGGAGCGGAAG
GCTGACCACAGGCGGCAGATCGAGAGCCTGTGGGAAAAGCTCAGCGTGCC
GGAGCGGCACCGCCAGGAGCACCTGGGGAAGACGAAGGGGATCACGCACT
CGGACATGGACGAGCTGGAGGCGGAGCTAGCGCGGCTGAGGAAGCTCAAG
GCGGAGAAGCTGACGGACATGCTCAAGGCCTCCAGGGTGGAGGTCGCGGG
GTTGTTAGAGGTGGAGCACCTGGGGAAGACGAAGGGGATCACGCACTCGG
ACATGGACGAGCTGGAGGCGGAGCTAGCGCGGCTGAGGAAGCTCAAGGCG
GAGAAGCTGACGGACATGCTCAAGGCCTCCAGGGTGGAGGTCGCGGGGTT
GTTAGAGGTG
back to top