prot_L-elsbetiae_contig7681.16618.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7681.16618.1
Unique Nameprot_L-elsbetiae_contig7681.16618.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length390
Homology
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BLAST of mRNA_L-elsbetiae_contig7681.16618.1 vs. uniprot
Match: A0A6H5KXZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ2_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.020e-13
Identity = 102/234 (43.59%), Postives = 107/234 (45.73%), Query Frame = 0 
Query:  138 PAAKQARGLYGRVSGLVGRAVNLLTPGRPRRATPAAPAAADMGGDDDLEAGRGTTAAVGVEGXXXXXXXXXEPVAARPAVDPAVAG------------------DPPSRKLGVDAVDGDXXXXXXXXXXXXXFSPGVGXXXXXXXXXRARR-ARVGGNGGA----------TPSSRRISGDGLAPASLRGSTAGDGA----AEEFGLPPVPPFYPRQGGGASPPAGGXXAGARG 338
            P AKQ RGLY RV+GLVGRAV LLTPGRPR     A  AA+   D+DLEA  G  AA G E XXXXXXXXX                                  P SR  GVD                  FSPGVG           R  A VG  G A          + S+RR SGDGL   SLRGSTAGDG     AEE GLPPVPPFY    G ASP   G   G  G
Sbjct:   39 PPAKQPRGLYRRVTGLVGRAVGLLTPGRPRAPPRIASTAAE---DNDLEAAAGA-AARGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSSRHGGVDG--------GANLTKAAFFSPGVGQRREGLRRQTRRGGAGVGTKGNAISKLPSSLRLSSSARRASGDGLGSTSLRGSTAGDGXXXXXAEELGLPPVPPFYKL--GAASPAPAGRVGGDEG 258
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7681.16618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXZ2_9PHAE2.020e-1343.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7681contigL-elsbetiae_contig7681:5890..7637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7681.16618.1mRNA_L-elsbetiae_contig7681.16618.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7681 5890..7637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7681.16618.1 ID=prot_L-elsbetiae_contig7681.16618.1|Name=mRNA_L-elsbetiae_contig7681.16618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
SLSTLRQEERTRGEECSSQGRGRRRPSARASERQKHWQTPPSATSSTDQT
SMGEGGPASDSDGGTNGSSSLRSKRPLHRQQQQQQQLPETESTAGSKRRR
DGAPEEASAAVEDTQGGGDAAAAAAAAAAVPEDDVAPPAAKQARGLYGRV
SGLVGRAVNLLTPGRPRRATPAAPAAADMGGDDDLEAGRGTTAAVGVEGG
AGGGGREEEPVAARPAVDPAVAGDPPSRKLGVDAVDGDSGAGDHANPPAA
LFSPGVGARRGDGPHRRARRARVGGNGGATPSSRRISGDGLAPASLRGST
AGDGAAEEFGLPPVPPFYPRQGGGASPPAGGGGAGARGRGARPLFLGTGD
GPAGPQSPAGVTIKKSKGKGRGQEGGGGVVDWELQEEEEE
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